| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2252658 = | 74 (0.750) | 5 (0.050) | 4/148 | NT | 6.3% | intergenic (+94/+58) | luxS/USA300HOU_RS11525 | S‑ribosylhomocysteine lyase/hypothetical protein |
| ? | USA300TCH1516_ALE | 2252704 = | 80 (0.880) | intergenic (+140/+12) | luxS/USA300HOU_RS11525 | S‑ribosylhomocysteine lyase/hypothetical protein | |||||
Only 100 of 145 total aligned reads displayed.
TTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACG > USA300TCH1516_ALE/2252568‑2252746 | aaacaattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaata > 1:1144961‑M1/91‑91 (MQ=255) tAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCaaaaa < 1:2077124/91‑1 (MQ=255) caattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaataaat < 1:2580096‑M1/4‑1 (MQ=255) caattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaataaat < 1:3248338‑M1/4‑1 (MQ=255) tcaatcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATc > 1:4098476/1‑91 (MQ=255) tcaatcaaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATc > 1:1441692/1‑91 (MQ=255) aattgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATc < 1:3660665‑M1/5‑1 (MQ=255) attgccaacatggcaactatatttaaggttacctatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCg > 1:3741257‑M1/86‑91 (MQ=255) aaGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACaa > 1:1433970/1‑91 (MQ=255) aGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACaaa > 1:857211/1‑91 (MQ=255) gTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAAt < 1:1238844/91‑1 (MQ=255) ttAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATg > 1:1759444/1‑91 (MQ=255) ataataaaaagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:3668561‑M2/56‑91 (MQ=255) aaTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaa > 1:462249/1‑91 (MQ=255) aTCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaa > 1:2017883/1‑91 (MQ=255) tCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGaaaa < 1:2998966/91‑1 (MQ=255) cAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACCAATGaaaaa > 1:3968715/1‑91 (MQ=255) cAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACCAATGaaaaa > 1:3968579/1‑91 (MQ=255) aGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAg > 1:315903/1‑91 (MQ=255) aaaaagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGt > 1:1449740‑M2/51‑91 (MQ=255) AAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTa < 1:3991298‑M1/91‑1 (MQ=255) AAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTa < 1:102020‑M1/91‑1 (MQ=255) AAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaa < 1:2902353‑M1/91‑1 (MQ=255) aagcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAATAAGTaaa > 1:2077055‑M2/48‑91 (MQ=255) agcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaaaa > 1:3046614‑M2/47‑91 (MQ=255) agcagttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTaaaa > 1:3270810‑M2/47‑91 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:1247654‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:876682‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:276529‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTT‑ATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCt < 1:1608404‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTT‑ATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCt < 1:1608441‑M1/91‑1 (MQ=255) CAGTCGAACAATGATTTTACAATCGCCATTGTCAAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATc < 1:1128411‑M1/91‑1 (MQ=255) gttggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCtt > 1:3466918‑M2/43‑91 (MQ=255) GTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCtt < 1:3808185‑M1/91‑1 (MQ=255) ggacaatggtgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa > 1:1944870‑M2/40‑91 (MQ=255) ggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa > 1:1435282‑M2/40‑91 (MQ=255) ggacaatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTaa > 1:1435476‑M2/40‑91 (MQ=255) aCAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACa > 1:1354086/1‑91 (MQ=255) caatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAt > 1:690731‑M2/37‑91 (MQ=255) aatggcgattgtaaaatcattgttcgactgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAtt > 1:2412681‑M2/36‑91 (MQ=255) aaTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAtt > 1:1040828/1‑91 (MQ=255) aTGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACAttt > 1:65174/1‑91 (MQ=255) tatgcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:1974237‑M1/53‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt < 1:669808/91‑1 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:2717391/1‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:2584645/1‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt > 1:2717198/1‑91 (MQ=255) gATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGt < 1:669061/91‑1 (MQ=255) aTTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTc < 1:2328991/91‑1 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTcc < 1:636604/91‑1 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTcc > 1:1210103/1‑91 (MQ=255) ttttACAATCGCCATTGTCCAACTGCTTTTTATGATGCTTCAAAGTCAAAAAATCGAACCAATGAAAAAGTAAAATCTTTAACATTTGTcc < 1:3688824/91‑1 (MQ=255) tttACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCg < 1:669999/91‑1 (MQ=255) gcagttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCg > 1:1931022‑M1/50‑91 (MQ=255) gttcgtgttaatgggactaattaagaaattatagtggttctcaaatAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatt > 1:1779603‑M1/47‑91 (MQ=255) gttcgtgttaatgcgactaattaagaaattatagtggttctcagatAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatt > 1:4147761‑M1/47‑91 (MQ=255) aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatt < 1:1864890/91‑1 (MQ=255) aCAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatt < 1:1864381/91‑1 (MQ=255) aTCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttat < 1:2511054/91‑1 (MQ=255) aTCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttat > 1:2546588/1‑91 (MQ=255) tCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttatt > 1:2025066/1‑91 (MQ=255) cGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttattt > 1:2284101/1‑91 (MQ=255) cGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttattt < 1:3440684/91‑1 (MQ=255) cGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttattt < 1:1203557/91‑1 (MQ=255) cGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGatttattt < 1:1203391/91‑1 (MQ=255) gCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTg < 1:703198/91‑1 (MQ=255) tCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCa < 1:216901/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:2861039/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:1242040/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:3026802/91‑1 (MQ=255) ccAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCAc < 1:2861393/91‑1 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt < 1:2109191/91‑1 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt < 1:1007077/91‑1 (MQ=255) cAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACt < 1:274552/91‑1 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta > 1:3839448/1‑91 (MQ=255) aaCTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACta < 1:3485576/91‑1 (MQ=255) actgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACtat < 1:1745637‑M2/82‑1 (MQ=255) tgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATaa > 1:405397‑M2/8‑91 (MQ=255) tgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATaa > 1:405469‑M2/8‑91 (MQ=255) tgcttttTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATaa < 1:3157420‑M2/84‑1 (MQ=255) tTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCtt < 1:1554723‑M2/90‑1 (MQ=255) tattatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTa < 1:791575/91‑1 (MQ=255) tatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAtt < 1:2856273/91‑1 (MQ=255) tatGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAAtt < 1:522744/91‑1 (MQ=255) tGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAg > 1:1538167/1‑91 (MQ=255) tGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAg > 1:3618075/1‑91 (MQ=255) gCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGt < 1:470216/91‑1 (MQ=255) gCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGt < 1:4130577/91‑1 (MQ=255) ttCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTcc > 1:3529624/1‑91 (MQ=255) ttCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTcc < 1:547057/91‑1 (MQ=255) tCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTccc > 1:4126386/1‑91 (MQ=255) aaaGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCAt < 1:4034414/91‑1 (MQ=255) aaGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCTCAtt > 1:1742357/1‑91 (MQ=255) tCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAac < 1:94958/91‑1 (MQ=255) cAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca > 1:407922/1‑91 (MQ=255) cAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca < 1:1403663/91‑1 (MQ=255) cAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAaca > 1:3840142/1‑91 (MQ=255) aaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg > 1:1629196/1‑91 (MQ=255) aaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg < 1:751284/91‑1 (MQ=255) aaaaaTCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACg > 1:919391/1‑91 (MQ=255) | TTAGTCAATCAAGTTAATCAGAAAAGCAGTCGAACAATGATTTTACAATCGCCATTGTCCAACTGCTTTTTATTATGCTTCAAAGTCAAAAAATCGAACAAATGAAAAAGTAAAATCTTTAACATTTGTCCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACG > USA300TCH1516_ALE/2252568‑2252746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |