| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2461467 = | 117 (1.190) | 12 (0.130) | 9/146 | NT | 10.2% | intergenic (‑193/+38) | natA_2/yhaI | ABC transporter ATP‑binding protein NatA/Inner membrane protein YhaI |
| ? | USA300TCH1516_ALE | 2461499 = | 104 (1.160) | intergenic (‑225/+6) | natA_2/yhaI | ABC transporter ATP‑binding protein NatA/Inner membrane protein YhaI | |||||
Only 100 of 166 total aligned reads displayed.
TGAAAAATTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTACACG > USA300TCH1516_ALE/2461377‑2461557 | gAAAAATTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTaaaaaa > 1:1567680/1‑91 (MQ=255) aaccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataa < 1:1027204‑M1/2‑1 (MQ=255) aaccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataa < 1:2317121‑M1/2‑1 (MQ=255) aaccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataa < 1:1231480‑M1/2‑1 (MQ=255) accagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataaa < 1:2913744‑M1/3‑1 (MQ=255) aaaaaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTaaaaaaa > 1:3411666/1‑91 (MQ=255) ccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAat < 1:2442547‑M1/4‑1 (MQ=255) ccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAat > 1:2269593‑M1/88‑91 (MQ=255) ccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAat > 1:3233483‑M1/88‑91 (MQ=255) aaaaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAat < 1:154730/91‑1 (MQ=255) aaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAatat < 1:414118/91‑1 (MQ=255) ttAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATccc < 1:2644918/91‑1 (MQ=255) tAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCa > 1:3819206/1‑91 (MQ=255) tAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCa > 1:32378/1‑91 (MQ=255) aaaTAGTGTCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAg < 1:2084895/91‑1 (MQ=255) aaTAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGc > 1:66687/1‑91 (MQ=255) aaTAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGc > 1:409521/1‑91 (MQ=255) aaTAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGc > 1:409363/1‑91 (MQ=255) tAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcat < 1:3446040/91‑1 (MQ=255) gTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcatca < 1:3711022/91‑1 (MQ=255) gTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcatca < 1:3362450/91‑1 (MQ=255) gTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcatca < 1:3084192/91‑1 (MQ=255) gTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcatca < 1:3758262/91‑1 (MQ=255) gTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcatca < 1:3084113/91‑1 (MQ=255) gTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcatca < 1:3758546/91‑1 (MQ=255) gCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCAtt > 1:1212154/1‑91 (MQ=255) cATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATtgt < 1:1270408/91‑1 (MQ=255) aTTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATtgtg < 1:2599908/91‑1 (MQ=255) aTTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATtgtg < 1:1076709/91‑1 (MQ=255) aTTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATtgtg < 1:2174294/91‑1 (MQ=255) ttttGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGcc < 1:2062557/91‑1 (MQ=255) cggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGcc > 1:2236531‑M1/69‑91 (MQ=255) tttGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCg > 1:2020334/1‑91 (MQ=255) tGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCgag > 1:2862806/1‑91 (MQ=255) tGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCgag > 1:1998419/1‑91 (MQ=255) cATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGat > 1:3625307/1‑91 (MQ=255) cATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGat < 1:196168/91‑1 (MQ=255) aagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGata > 1:1613492‑M1/63‑91 (MQ=255) aagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGata > 1:1774228‑M1/63‑91 (MQ=255) tGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGatat < 1:873500/91‑1 (MQ=255) agcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGatat > 1:1755420‑M1/62‑91 (MQ=255) cgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATAttt > 1:1906637‑M1/60‑91 (MQ=255) gtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTtata > 1:57606‑M1/57‑91 (MQ=255) acatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTTATATc > 1:651617‑M1/55‑91 (MQ=255) tCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCAt < 1:2256848/91‑1 (MQ=255) tCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCAt < 1:703920/91‑1 (MQ=255) cATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCAtt > 1:3720264/1‑91 (MQ=255) aTTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTa < 1:1511592/91‑1 (MQ=255) aTTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTa > 1:753227/1‑91 (MQ=255) aTTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTa > 1:753359/1‑91 (MQ=255) tAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAGAAATATCCCAGCATCATTGTGCCGTGATATTTATATCATTACa < 1:1768449/91‑1 (MQ=255) tAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACa > 1:51138/1‑91 (MQ=255) tAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACa < 1:1429630/91‑1 (MQ=255) aGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACaa < 1:1524186/91‑1 (MQ=255) gCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAAt < 1:761184/91‑1 (MQ=255) gCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAAt < 1:877360/91‑1 (MQ=255) acaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAAtt > 1:1874448‑M1/46‑91 (MQ=255) aCTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTg < 1:1170691/91‑1 (MQ=255) tAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGAt < 1:3548603/91‑1 (MQ=255) gATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTa > 1:3330895/1‑91 (MQ=255) tatGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATc < 1:2337223/91‑1 (MQ=255) tatGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATc > 1:1788576/1‑91 (MQ=255) tGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTg < 1:2280175/91‑1 (MQ=255) tGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTg < 1:566966/91‑1 (MQ=255) tGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTg > 1:1196740/1‑91 (MQ=255) ttttttCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGtt < 1:3344100/91‑1 (MQ=255) tttttCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGttt > 1:4022058/1‑91 (MQ=255) ttCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTttctt > 1:1098556/1‑91 (MQ=255) tCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTttcttc < 1:2147310/91‑1 (MQ=255) ccATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTcc > 1:3444083/1‑91 (MQ=255) cATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCg < 1:244032/91‑1 (MQ=255) aTGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCgg < 1:1994435/91‑1 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 1:485708/1‑91 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 1:1280011/1‑91 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 1:1131200/1‑91 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 1:1096121/1‑91 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt < 1:2986347/91‑1 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 1:3431057/1‑91 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 1:287612/1‑91 (MQ=255) tttATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGttt < 1:2277976/91‑1 (MQ=255) tttATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGttt > 1:1277302/1‑91 (MQ=255) ttGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCgg < 1:1551959/91‑1 (MQ=255) ttGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCgg > 1:115891/1‑91 (MQ=255) tGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGgt < 1:836781/91‑1 (MQ=255) gCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGgtg < 1:2507602/91‑1 (MQ=255) ccTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGgtgt > 1:2912499/1‑91 (MQ=255) cTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGtt < 1:543226/91‑1 (MQ=255) ttATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGttt > 1:3991543/1‑91 (MQ=255) ttATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGttt < 1:1330158/91‑1 (MQ=255) ttATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGttt > 1:2815616/1‑91 (MQ=255) tttGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAg < 1:3716897/91‑1 (MQ=255) ttGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGa < 1:2733248/91‑1 (MQ=255) ttGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGa < 1:2732529/91‑1 (MQ=255) tAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGt > 1:3538965/1‑91 (MQ=255) tAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGt > 1:2323022/1‑91 (MQ=255) aaaaaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTa > 1:2620032/1‑91 (MQ=255) aaaaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTac > 1:1213376/1‑91 (MQ=255) aaaaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTac < 1:3956550/91‑1 (MQ=255) aaaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTaca < 1:560576/91‑1 (MQ=255) aaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTacac < 1:3138002/91‑1 (MQ=255) | TGAAAAATTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTACACG > USA300TCH1516_ALE/2461377‑2461557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |