| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2681424 | 88 (0.890) | 8 (0.100) | 6/130 | NT | 9.3% | intergenic (‑459/+120) | USA300HOU_RS13810/mvaA | hypothetical protein/3‑hydroxy‑3‑methylglutaryl‑coenzyme A reductase |
| ? | USA300TCH1516_ALE | = 2681449 | 84 (1.050) | intergenic (‑484/+95) | USA300HOU_RS13810/mvaA | hypothetical protein/3‑hydroxy‑3‑methylglutaryl‑coenzyme A reductase | |||||
Only 100 of 153 total aligned reads displayed.
TCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAAC > USA300TCH1516_ALE/2681335‑2681514 | tCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACg < 1:2964573/91‑1 (MQ=255) ccAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGa < 1:80683/91‑1 (MQ=255) aaTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACg < 1:3238048/91‑1 (MQ=255) aTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGc < 1:2534308/91‑1 (MQ=255) aTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGc < 1:2821953/91‑1 (MQ=255) aTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGc < 1:769847/91‑1 (MQ=255) aTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGc < 1:2281375/91‑1 (MQ=255) aTCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAt > 1:3365994/1‑91 (MQ=255) tCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAtt > 1:2414210/1‑91 (MQ=255) tCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAtt < 1:811396/91‑1 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc > 1:1066/1‑91 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 1:2690516/91‑1 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 1:3948092/91‑1 (MQ=255) ataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCt < 1:3681035/91‑1 (MQ=255) taATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTg < 1:3506307/91‑1 (MQ=255) tGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTAt < 1:498314/91‑1 (MQ=255) tGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTAt < 1:594592/91‑1 (MQ=255) gAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACgaacgcatacaggaaattgaag < 1:1410990‑M1/91‑23 (MQ=255) ttCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt > 1:3030769/1‑91 (MQ=255) cGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgt < 1:3770899‑M1/91‑28 (MQ=255) gTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtg < 1:287345‑M2/91‑4 (MQ=255) gTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtg < 1:287362‑M2/91‑4 (MQ=255) tctcATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtga < 1:1277199‑M2/91‑5 (MQ=255) ctcATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgat < 1:88118‑M1/91‑31 (MQ=255) ctcATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgat < 1:3105594‑M1/91‑31 (MQ=255) aTGAAGAAGTTATTTACTTTTCATTAGACTGACTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTATATGCGTgtgataga > 1:3529045‑M2/1‑83 (MQ=255) tGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaa < 1:1709436‑M1/91‑35 (MQ=255) tGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaa < 1:2848810‑M1/91‑35 (MQ=255) agaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt > 1:343911‑M2/1‑79 (MQ=255) agaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt > 1:2150871‑M2/1‑79 (MQ=255) agaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt > 1:2217745‑M2/1‑79 (MQ=255) agaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt > 1:1316069‑M2/1‑79 (MQ=255) agaagTTATGTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagtt > 1:3975818‑M2/1‑79 (MQ=255) agTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttt > 1:3511032‑M2/1‑76 (MQ=255) agTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttt < 1:1793286‑M2/91‑16 (MQ=255) tATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTAtt < 1:725446/91‑1 (MQ=255) tATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTAtt < 1:1098107/91‑1 (MQ=255) aTTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTAttt > 1:2633682/1‑91 (MQ=255) ttACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTAttttt < 1:314988/91‑1 (MQ=255) tACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTg > 1:3702880/1‑91 (MQ=255) ttttCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTc < 1:3765327/91‑1 (MQ=255) tCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCata > 1:1782219/1‑91 (MQ=255) tCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCata < 1:1323083/91‑1 (MQ=255) tCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCata < 1:1322806/91‑1 (MQ=255) cATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCatat > 1:2684803/1‑91 (MQ=255) aTTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATAtt < 1:2795741/91‑1 (MQ=255) aTTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATAtt < 1:2925977/91‑1 (MQ=255) gACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAtt > 1:4028198/1‑91 (MQ=255) aCTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAttt > 1:969242/1‑91 (MQ=255) aCTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAttt > 1:4133494/1‑91 (MQ=255) aCTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAttt > 1:1850203/1‑91 (MQ=255) aCTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAttt > 1:1989880/1‑91 (MQ=255) aTTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCt > 1:3802530/1‑91 (MQ=255) tttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTa > 1:3845119/1‑91 (MQ=255) tttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTa > 1:652269/1‑91 (MQ=255) aCTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgc > 1:2726669/1‑91 (MQ=255) aCTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgc > 1:2726722/1‑91 (MQ=255) cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCTTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgcg > 1:3505565/1‑91 (MQ=255) cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgcg < 1:3026813/91‑1 (MQ=255) cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgcg > 1:1358782/1‑91 (MQ=255) cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgcg < 1:635993/91‑1 (MQ=255) aaTCGAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCt > 1:2062099/1‑91 (MQ=255) aTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTa > 1:2094435/1‑91 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGa < 1:3001965/91‑1 (MQ=255) aaaaaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataact < 1:1794639‑M1/91‑77 (MQ=255) aaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGAt > 1:2342108/1‑91 (MQ=255) aaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATg > 1:2063120/1‑91 (MQ=255) aaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATg < 1:4128508/91‑1 (MQ=255) aaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATg > 1:2062080/1‑91 (MQ=255) aaaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttc > 1:3009255‑M1/1‑13 (MQ=255) aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtatataacttct > 1:3975851‑M1/1‑12 (MQ=255) aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttct > 1:2150871‑M1/1‑12 (MQ=255) aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttct > 1:343911‑M1/1‑12 (MQ=255) aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttct > 1:1321545‑M1/1‑12 (MQ=255) aaCTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttct < 1:865258‑M1/91‑80 (MQ=255) cTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttc > 1:524433‑M1/1‑10 (MQ=255) cTTCTATCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttc < 1:3687827‑M1/91‑82 (MQ=255) ttCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttca < 1:2848810‑M2/91‑58 (MQ=255) ttCTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttca < 1:1709436‑M2/91‑58 (MQ=255) tCTATCACacgcatataggaaattgaagcgttcgtgatagaagttttttgattagtaagtcagtctaatgaaaagtaaataacttcttcat > 1:3529045‑M1/1‑8 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatg < 1:2421365‑M2/91‑60 (MQ=255) cTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGCTGgacagac > 1:3731644/1‑91 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGgactgact < 1:1818920/91‑1 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGgactgact < 1:1991641/91‑1 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGgactgact < 1:1852495/91‑1 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGgactgact < 1:1818906/91‑1 (MQ=255) tATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGgactgact > 1:1551529/1‑91 (MQ=255) aTCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgag > 1:4123285‑M1/1‑5 (MQ=255) aTCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgag < 1:3105594‑M2/91‑62 (MQ=255) aTCACGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgag < 1:88118‑M2/91‑62 (MQ=255) aTCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACtt < 1:1518004/91‑1 (MQ=255) tCACacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgaga < 1:1277199‑M1/91‑88 (MQ=255) tCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTa < 1:2444634/91‑1 (MQ=255) tCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTa < 1:1524975/91‑1 (MQ=255) tCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTa < 1:3886732/91‑1 (MQ=255) cacacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagac < 1:287345‑M1/91‑89 (MQ=255) cACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTaa < 1:4009769/91‑1 (MQ=255) cACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTaa < 1:2343839/91‑1 (MQ=255) acacgcatacaggaaattgaagcgttcgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacg < 1:152203‑M1/91‑90 (MQ=255) cGAACGCTTCAATTTCCTGTATGCGTgtgatagaagttttttgattagtaaatcagtctaatgaaaagtaaataacttcttcatgagacga < 1:3107868‑M2/91‑66 (MQ=255) | TCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGATGGACTGACTTAAAC > USA300TCH1516_ALE/2681335‑2681514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |