BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	= 648	447 (1.270)	22 (0.070)	12/148	NT	5.1%	coding (417/984 nt)	repA	replication protein A
*	?	CP000731	= 720	404 (1.250)	22 (0.070)	12/148	NT	5.1%	coding (489/984 nt)	repA	replication protein A

Only 100 of 568 total aligned reads displayed.

TTTAATGAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACT  >  CP000731/558‑738

   aaTGAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGaaaa                                                                                         >  1:1635069/1‑91 (MQ=255)

   aaTGAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGaaaa                                                                                         <  1:2645736/91‑1 (MQ=255)

   aaTGAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGaaaa                                                                                         <  1:4047553/91‑1 (MQ=255)

    aTGAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAtttt                                                                                        <  1:4069983‑M1/91‑5 (MQ=255)

      gAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGCAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCg                                                                                      >  1:385341/1‑91 (MQ=255)

      gAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCg                                                                                      <  1:2955806/91‑1 (MQ=255)

      gAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCg                                                                                      <  1:3123035/91‑1 (MQ=255)

        aaCCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGaa                                                                                    <  1:2822491/91‑1 (MQ=255)

        aaCCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGaa                                                                                    >  1:2232729/1‑91 (MQ=255)

        aaCCTATTGTCACAGAACGTGATATGTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGACGTTCGAttttcgaa                                                                                    <  1:1164898‑M1/91‑9 (MQ=255)

        aaCCTATTGGCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGaa                                                                                    <  1:3962305/91‑1 (MQ=255)

         aacTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAAc                                                                                   >  1:707473/3‑91 (MQ=255)

         aCCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGACGTTCGAttttcgaac                                                                                   <  1:1728773‑M1/91‑10 (MQ=255)

         aCCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAAc                                                                                   >  1:1674416/1‑91 (MQ=255)

         aCCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAAc                                                                                   >  1:3341653/1‑91 (MQ=255)

          ccTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGACGTTCGAatttcgaact                                                                                  <  1:2877327‑M1/91‑11 (MQ=255)

          ccTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACg                                                                                  <  1:2739397/91‑1 (MQ=255)

           cTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGt                                                                                 <  1:518100/91‑1 (MQ=255)

             aTTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTcc                                                                               >  1:2529656/1‑91 (MQ=255)

             aTTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTcc                                                                               <  1:883913/91‑1 (MQ=255)

             aTTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTcc                                                                               >  1:2659161/1‑91 (MQ=255)

              ttGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCa                                                                              >  1:1963073/1‑91 (MQ=255)

               tGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAg                                                                             >  1:489742/1‑91 (MQ=255)

               tGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAg                                                                             >  1:1394238/1‑91 (MQ=255)

                 tCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGaa                                                                           >  1:2101322/1‑91 (MQ=255)

                   acaGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGt                                                                         <  1:3832532/91‑1 (MQ=255)

                   acaGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGt                                                                         <  1:1584820/91‑1 (MQ=255)

                   acaGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGt                                                                         <  1:3102486/91‑1 (MQ=255)

                    caGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGtt                                                                        <  1:3528128/91‑1 (MQ=255)

                      gAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCg                                                                      <  1:2281849/91‑1 (MQ=255)

                        aCGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAaaatcgaacttctggacgttcgat                                                                    <  1:3003332‑M1/91‑25 (MQ=255)

                         cGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaaa                                                                   >  1:3668515/1‑91 (MQ=255)

                          gTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaaaa                                                                  >  1:904684/1‑91 (MQ=255)

                           tGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAt                                                                 <  1:4007443/91‑1 (MQ=255)

                           tGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAt                                                                 <  1:2938514/91‑1 (MQ=255)

                            gATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATc                                                                <  1:1786820/91‑1 (MQ=255)

                            gATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATc                                                                >  1:3619657/1‑91 (MQ=255)

                            gATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATc                                                                >  1:3689153/1‑91 (MQ=255)

                            gATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATc                                                                >  1:3790011/1‑91 (MQ=255)

                                tttACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGACGTTCGAttttcgaacttctggacgttcgattttcgaac                                                            <  1:673475‑M1/91‑33 (MQ=255)

                                tttACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAAc                                                            >  1:779573/1‑91 (MQ=255)

                                  tACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGt                                                          <  1:3015129/91‑1 (MQ=255)

                                     aaaaTAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCa                                                       <  1:3025082/91‑1 (MQ=255)

                                     aaaaTAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCa                                                       <  1:2031315/91‑1 (MQ=255)

                                      aaaTAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACTTctgg                                                      <  1:1703569/91‑4 (MQ=255)

                                      aaaTAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAg                                                      >  1:2914082/1‑91 (MQ=255)

                                        aTAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGaa                                                    >  1:1561533/1‑91 (MQ=255)

                                         tAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAg                                                   >  1:1026107/1‑91 (MQ=255)

                                          aGAAATAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGt                                                  <  1:614726/91‑1 (MQ=255)

                                           gAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGtt                                                 <  1:2053914/91‑1 (MQ=255)

                                           gAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGtt                                                 >  1:3758019/1‑91 (MQ=255)

                                           gAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGtt                                                 >  1:424158/1‑91 (MQ=255)

                                            aaaaaGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGCCCAGAAGTTc                                                <  1:1000028/91‑1 (MQ=255)

                                             aaaaGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCg                                               <  1:1815435/91‑1 (MQ=255)

                                             aaaaGAAGAAAACGATGTTGAACCTTACGGCGACAAGAAAGTTCGACAATCGAACGTCCTGAAGTTCGAAAATCGAACGTCCAGAAGTTCg                                               >  1:3311174/1‑91 (MQ=21)

                                              aaaGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGa                                              >  1:2962869/1‑91 (MQ=255)

                                              aaaGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGa                                              >  1:563133/1‑91 (MQ=255)

                                               aagaagAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaa                                             >  1:2542212/1‑91 (MQ=255)

                                               aagaagAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaa                                             >  1:3513613/1‑91 (MQ=255)

                                                agaagaAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGatt                                            <  1:1272718/91‑3 (MQ=255)

                                                 gaagaaATCGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaaaa                                           <  1:2078299/91‑1 (MQ=255)

                                                 gaagaaAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaaaa                                           >  1:1303321/1‑91 (MQ=255)

                                                  aagaaAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAttttcgaacttctggacgttcgattttcgaacttctggacgttcgatttt                                          <  1:3091322‑M1/91‑51 (MQ=255)

                                                  aagaaAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGatttt                                          <  1:260130/91‑5 (MQ=255)

                                                  aagaaAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAt                                          <  1:151058/91‑1 (MQ=255)

                                                  aagaaAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAt                                          >  1:1941265/1‑91 (MQ=255)

                                                   agaaAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATc                                         >  1:1894919/1‑91 (MQ=255)

                                                      aaaCGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGaa                                      <  1:2693416/91‑1 (MQ=255)

                                                      aaaCGATGTTGAACCATACGGGAAGAAAGAAGTGCGAAAATCGAACGTCCGGAAGTTCGGAAATCGATCGTCCAGAAGTTCGAAAATCGaa                                      <  1:1985417/91‑1 (MQ=17)

                                                         cGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGt                                   >  1:4112806/1‑91 (MQ=255)

                                                          gATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAACATCGAACGTCCAGAAGTTCGAAAATCGAACGTc                                  >  1:3392873/1‑91 (MQ=255)

                                                          gATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTc                                  >  1:1753504/1‑91 (MQ=255)

                                                           aTGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTcc                                 <  1:3907590/91‑1 (MQ=255)

                                                           aTGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTcc                                 <  1:918235/91‑1 (MQ=255)

                                                             gTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAg                               >  1:3768478/1‑91 (MQ=255)

                                                             gTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAg                               >  1:3219024/1‑91 (MQ=255)

                                                             gTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAg                               >  1:1213855/1‑91 (MQ=255)

                                                             gTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAg                               >  1:3048660/1‑91 (MQ=255)

                                                               tGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGaa                             >  1:2450619/1‑91 (MQ=255)

                                                                gAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAg                            >  1:3063303/1‑91 (MQ=255)

                                                                 aaCCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGt                           <  1:2334617/91‑1 (MQ=255)

                                                                  aCCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGtt                          >  1:2803866/1‑91 (MQ=255)

                                                                    cTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCg                        <  1:3287227/91‑1 (MQ=255)

                                                                      tACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaa                      >  1:2841581/1‑91 (MQ=255)

                                                                         ggCGAGAAGGAAGTTCGAAAACCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGatttt                   <  1:3157096/91‑5 (MQ=255)

                                                                          gCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtc                  >  1:1112826‑M2/1‑89 (MQ=255)

                                                                           cGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcg                 >  1:2900742‑M2/1‑88 (MQ=255)

                                                                            gagaAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcga                <  1:3427663‑M2/91‑5 (MQ=255)

                                                                            gagaAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcga                >  1:2410522‑M2/1‑87 (MQ=255)

                                                                             agaAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaa               <  1:816800‑M2/91‑6 (MQ=255)

                                                                              tctggacgttcGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaac              >  1:1350610‑M2/4‑85 (MQ=255)

                                                                              gaaggaagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaac              <  1:3705672‑M2/91‑7 (MQ=255)

                                                                                aggaagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAacac            <  1:456817/91‑1 (MQ=255)

                                                                                  gaagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTa          >  1:3247502/1‑91 (MQ=255)

                                                                                    agTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAAt        >  1:1844742/1‑91 (MQ=255)

                                                                                    agTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAAt        >  1:2385353/1‑91 (MQ=255)

                                                                                       tCGAttttcgaacttctggacgttcgattttcgaacttctggacgttcgattttcgaacttctggacgttcgattttcgaacttccttctc     <  1:723039‑M1/91‑88 (MQ=255)

                                                                                        cGAttttcgaacttctggacgttcgattttcgaacttctggacgttcgattttcgaacttctggacgttcgattttcgaacttccttctcg    >  1:1489382‑M1/1‑3 (MQ=255)

                                                                                        cGAttttcgaacttctggacgttcgattttcgaacttctggacgttcgattttcgaacttctggacgttcgattttcgaacttccttctcg    >  1:2159195‑M1/1‑3 (MQ=255)

                                                                                          aaaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACt  >  1:1056980/1‑91 (MQ=255)

TTTAATGAAACCTATTGTCACAGAACGTGATATTTACAAAATAGAAAAAGAAGAAAACGATGTTGAACCTTACGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACT  >  CP000731/558‑738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.