BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	= 648	447 (1.270)	22 (0.070)	12/148	NT	5.1%	coding (417/984 nt)	repA	replication protein A
*	?	CP000731	= 720	404 (1.250)	22 (0.070)	12/148	NT	5.1%	coding (489/984 nt)	repA	replication protein A

Only 100 of 502 total aligned reads displayed.

CGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTACAAA  >  CP000731/630‑810

cGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGaaaa                                                                                            >  1:1120549/1‑91 (MQ=255)

     agaAGGAAGTTCGAAAATCGAACGTCCAGCAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGGACGTCCAGAAGTTCGAAAAtcgaa                                                                                       >  1:3332343‑M2/1‑86 (MQ=255)

      gaaggaagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaac                                                                                      <  1:1764558‑M2/91‑7 (MQ=255)

        aggaagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAacac                                                                                    <  1:457357/91‑1 (MQ=255)

          gaagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTa                                                                                  >  1:3950940/1‑91 (MQ=255)

           aagTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTaa                                                                                 <  1:577590/91‑1 (MQ=255)

            agTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAAt                                                                                >  1:2385353/1‑91 (MQ=255)

            agTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAAt                                                                                >  1:2889589/1‑91 (MQ=255)

                tgAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATa                                                                            >  1:3526520/2‑91 (MQ=255)

                cGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATa                                                                            >  1:890469/1‑91 (MQ=255)

                cGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATa                                                                            >  1:2519866/1‑91 (MQ=255)

                cGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGGTCGAAAATGGAATGTCCAGAAGTTCGAAAATCGAACACTAATGATa                                                                            <  1:3305477/91‑1 (MQ=255)

                  attttCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGACCACTAATGATACt                                                                          >  1:4120796/5‑91 (MQ=255)

                  aaggtCGGACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCCAAAGTCAACCGTCCAGAAGTGCGAAAATCGAACACTAATGATACt                                                                          <  1:626609/87‑1 (MQ=17)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaacttccttctcgccg                                                                         <  1:1982313‑M2/91‑20 (MQ=255)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaacttccttctcgccg                                                                         <  1:269773‑M2/91‑20 (MQ=255)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTg                                                                         >  1:3822241/1‑91 (MQ=255)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTg                                                                         >  1:3390292/1‑91 (MQ=255)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTg                                                                         >  1:1292103/1‑91 (MQ=255)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTg                                                                         >  1:310058/1‑91 (MQ=255)

                   aaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTg                                                                         >  1:2759748/1‑91 (MQ=255)

                       cGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACtt                                                                     >  1:2345452/1‑91 (MQ=255)

                       cGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACtt                                                                     >  1:1640762/1‑91 (MQ=255)

                       cGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACtt                                                                     >  1:1065300/1‑91 (MQ=255)

                        gAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACttt                                                                    >  1:554614/1‑91 (MQ=255)

                         aaCGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTa                                                                   >  1:1259856/1‑91 (MQ=255)

                         aaCGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTa                                                                   >  1:3935982/1‑91 (MQ=255)

                          aCGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTaa                                                                  >  1:709901/1‑91 (MQ=255)

                          aCGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTaa                                                                  >  1:2712014/1‑91 (MQ=255)

                          aCGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCAAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTaa                                                                  >  1:2046246/1‑91 (MQ=255)

                            gTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATg                                                                <  1:1349017/91‑1 (MQ=255)

                              ccAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGAc                                                              <  1:1684626/91‑1 (MQ=255)

                                 gAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACAtt                                                           >  1:1407059/1‑91 (MQ=255)

                                 gAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACAtt                                                           <  1:2322946/91‑1 (MQ=255)

                                  aaGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTg                                                          >  1:120210/1‑91 (MQ=255)

                                  aaGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTg                                                          <  1:1583530/91‑1 (MQ=255)

                                  aaGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTg                                                          >  1:3248600/1‑91 (MQ=255)

                                     ttCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACt                                                       <  1:1032979/91‑1 (MQ=255)

                                     ttCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACt                                                       <  1:3625650/91‑1 (MQ=255)

                                      tCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACtt                                                      >  1:1425614/1‑91 (MQ=255)

                                         attttCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTaa                                                   >  1:3582663/5‑91 (MQ=255)

                                         agaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTaa                                                   <  1:390564/89‑1 (MQ=255)

                                         aaaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTaa                                                   <  1:3762906/91‑1 (MQ=255)

                                         aaaaTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTaa                                                   >  1:1864700/1‑91 (MQ=255)

                                            aTCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGa                                                <  1:2658242/91‑1 (MQ=255)

                                              cGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATa                                              <  1:1319758/91‑1 (MQ=255)

                                              cGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATa                                              >  1:384838/1‑91 (MQ=255)

                                              cGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATa                                              >  1:776232/1‑91 (MQ=255)

                                                  cGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTga                                          >  1:2107643/1‑91 (MQ=255)

                                                   gTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTgag                                         <  1:1168466/91‑1 (MQ=255)

                                                    tCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTgaga                                        <  1:370231/91‑1 (MQ=255)

                                                    tCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTgaga                                        >  1:3359183/1‑91 (MQ=255)

                                                         aaGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGaataat                                   <  1:2171479/91‑1 (MQ=255)

                                                         aaGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGaataat                                   <  1:192327/91‑1 (MQ=255)

                                                         aaGTTCGAAAATAGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGaataat                                   >  1:3200722/1‑91 (MQ=255)

                                                          aGTTCGAAAATCGAACGTCCAGAAGTTCGAAAAtcgaacttccttctcgccgtaaggttcaacatcgttttcttctttttctattttgtaa                                  <  1:3040404‑M2/91‑59 (MQ=255)

                                                          aGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATg                                  >  1:641033/1‑91 (MQ=255)

                                                            ttCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGat                                >  1:4002054/1‑91 (MQ=255)

                                                              cGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGatat                              >  1:1704595/1‑91 (MQ=255)

                                                              cGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGatat                              >  1:2601156/1‑91 (MQ=255)

                                                               gAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatg                             >  1:2007651/1‑91 (MQ=255)

                                                               gAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatg                             >  1:3500129/1‑91 (MQ=255)

                                                                aaaaTCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatga                            >  1:3166297/1‑91 (MQ=255)

                                                                 ttttCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatgaa                           >  1:1616209/4‑91 (MQ=255)

                                                                  aaTCGAACGTCCAGAAGTTCGAAAAtcgaacttccttctcgccgtaaggttcaacatcgttttcttctttttctattttgtaaatatcacg                          <  1:2088160‑M2/91‑67 (MQ=255)

                                                                  aaTCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatgaat                          >  1:453068/1‑91 (MQ=255)

                                                                    tCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatgaatga                        >  1:4048596/1‑91 (MQ=255)

                                                                    tCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATatgaatga                        >  1:3148760/1‑91 (MQ=255)

                                                                      gAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACt                      >  1:2224453/1‑91 (MQ=255)

                                                                      gAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACt                      <  1:1469324/91‑1 (MQ=255)

                                                                       aaCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACtt                     <  1:2491663/91‑1 (MQ=255)

                                                                       aaCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACtt                     <  1:1665179/91‑1 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTg                    >  1:846716/1‑91 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTg                    >  1:736472/1‑91 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTg                    >  1:3427768/1‑91 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTg                    >  1:1726966/1‑91 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTg                    >  1:2842473/1‑91 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTg                    >  1:4097444/1‑91 (MQ=255)

                                                                        aCGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATCAATGACTTg                    >  1:3976041/1‑91 (MQ=255)

                                                                         cGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGa                   >  1:1824457/1‑91 (MQ=255)

                                                                           tCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAAt                 <  1:1542953/91‑1 (MQ=255)

                                                                           tCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAAt                 >  1:3652432/1‑91 (MQ=255)

                                                                             cAGAAGTTCGAAAATCGAACACTAATGATACTGGCTTTAATGACATTGACTTTAATGATGCTGAGAATAATGATATGAATGACTTGAATGa               <  1:3680784/91‑1 (MQ=255)

                                                                              aGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGat              >  1:1008140/1‑91 (MQ=255)

                                                                              aGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGat              >  1:1893807/1‑91 (MQ=255)

                                                                                  gTTCGAAAAtcgaacgtccttctcgccgtaaggttcaacatcgttttcttctttttctattttgtaaatatcacgttctgtgacaataggt          <  1:801535‑M2/91‑83 (MQ=255)

                                                                                   ttCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATaaa         <  1:2014969/91‑1 (MQ=255)

                                                                                    tCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAg        >  1:301278/1‑91 (MQ=255)

                                                                                    tCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAg        <  1:3476238/91‑1 (MQ=255)

                                                                                     cGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGt       >  1:669665/1‑91 (MQ=255)

                                                                                     cGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGt       >  1:280521/1‑91 (MQ=255)

                                                                                     cGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGt       >  1:819820/1‑91 (MQ=255)

                                                                                      gAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTa      <  1:51323/91‑1 (MQ=255)

                                                                                       aaaaTCGANCACNAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTAc     <  1:291894/91‑1 (MQ=255)

                                                                                       aaaaTCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTAc     >  1:938197/1‑91 (MQ=255)

                                                                                       aaaaTCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTAc     <  1:963252/91‑1 (MQ=255)

                                                                                        aaaTCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTACa    <  1:308229/91‑1 (MQ=255)

                                                                                        aaaTCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTACa    >  1:2436113/1‑91 (MQ=255)

                                                                                         aaTCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTACaa   <  1:2273002/91‑1 (MQ=255)

                                                                                          aTCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTACaaa  >  1:422206/1‑91 (MQ=255)

CGGCGAGAAGGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACGTCCAGAAGTTCGAAAATCGAACACTAATGATACTGACTTTAATGACATTGACTTTAATGATACTGAGAATAATGATATGAATGACTTGAATGATATAAAGTACAAA  >  CP000731/630‑810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.