| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | 1040 = | 1110 (0.110) | 199 (0.030) | 26/124 | NT | 16.6% | coding (155/192 nt) | USA300HOU_RS15665 | hypothetical protein |
| ? | NC_012417 | 1090 = | 1144 (0.150) | coding (105/192 nt) | USA300HOU_RS15665 | hypothetical protein | |||||
Only 100 of 14858 total aligned reads displayed.
ACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTT > NC_012417/949‑1130 | agccagaaattccaggggttttaaggtattttaaatttatatcatacaaatctgtactgtcttattgttttgacacaatatattgcgttTg > 1:2248157‑M1/90‑91 (MQ=255) agccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTg < 1:1546687‑M1/2‑1 (MQ=255) tgctatcattcaaaaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGt > 1:1879455‑M1/85‑91 (MQ=255) tgctatcattcaaaaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGt > 1:3127249‑M1/85‑91 (MQ=255) tgctatcattcaaaaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGt > 1:3800623‑M1/85‑91 (MQ=255) gCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGT > 1:2353439‑M1/1‑91 (MQ=255) gCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGT < 1:161889‑M1/91‑1 (MQ=255) gCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGT > 1:362116‑M1/1‑91 (MQ=255) aTTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTT > 1:3016336‑M1/1‑91 (MQ=255) tttGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTA < 1:672446‑M1/91‑1 (MQ=255) aattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTAtt > 1:3235683‑M1/83‑91 (MQ=255) aattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTAtt < 1:1036179‑M1/9‑1 (MQ=255) aattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTAtt < 1:1723733‑M1/9‑1 (MQ=255) aattccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTAtt < 1:3393‑M1/9‑1 (MQ=255) ggAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTT > 1:3988358‑M1/1‑91 (MQ=255) ccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtg > 1:3838551‑M1/79‑91 (MQ=255) ccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtg < 1:1803789‑M1/13‑1 (MQ=255) ccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtg > 1:2840864‑M1/79‑91 (MQ=255) ccaggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtg < 1:779706‑M1/13‑1 (MQ=255) caaaaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGTCTTATTTTtg < 1:2657854‑M1/17‑1 (MQ=255) aTTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTG < 1:626675‑M1/91‑1 (MQ=255) aTTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTG > 1:2913299‑M1/1‑91 (MQ=255) aTTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTG > 1:111448‑M1/1‑91 (MQ=255) aggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTtgtg < 1:88649‑M1/15‑1 (MQ=255) aaaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGTCTTATTTTtgtg < 1:1077253‑M1/19‑1 (MQ=255) tCGTAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGA < 1:3734895‑M1/91‑1 (MQ=255) ggggttttaaggtattttaaagtgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGa < 1:2774326‑M1/16‑1 (MQ=255) aaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGTCTTATTTTTGTGa < 1:961049‑M1/20‑1 (MQ=255) aaatgataggtctggcaaagccagaaattccaggggttttaaggtattttaaagtgatatcatacaaagctGTACTGTCTTATTTTTGTGa < 1:2023852‑M1/20‑1 (MQ=255) cGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 1:3087667‑M1/91‑1 (MQ=255) cGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGAC < 1:3916844‑M1/91‑1 (MQ=255) taaaagCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA > 1:2129728‑M1/2‑91 (MQ=255) gAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACA < 1:587099‑M1/91‑1 (MQ=255) aaaGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACaaa > 1:2391604/1‑91 (MQ=255) aGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATg < 1:122184/91‑1 (MQ=255) gCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGc > 1:47378/1‑91 (MQ=255) aaaaTTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtg < 1:2431475/91‑1 (MQ=255) aaattATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgt < 1:2588394‑M2/86‑1 (MQ=255) attATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtat < 1:1260935‑M2/88‑1 (MQ=255) ttATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatg < 1:546204‑M2/89‑1 (MQ=255) tATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatgt < 1:1766398‑M2/90‑1 (MQ=255) tATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCtgtatgt < 1:3468653‑M2/90‑1 (MQ=255) ttattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatt < 1:1839680‑M1/91‑15 (MQ=255) ttattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAg > 1:2549579/1‑91 (MQ=255) ttattTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAg < 1:118598/91‑1 (MQ=255) attTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttg < 1:439156‑M1/91‑17 (MQ=255) attTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttg < 1:3164804‑M1/91‑17 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtg < 1:1950959‑M2/91‑3 (MQ=255) aTTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtg < 1:287915‑M2/91‑3 (MQ=255) tttAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgt < 1:350626‑M1/91‑18 (MQ=255) tttAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgt < 1:3770747‑M1/91‑18 (MQ=255) tttAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgt > 1:2513967‑M2/1‑88 (MQ=255) tAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtca > 1:3697010‑M2/1‑86 (MQ=255) tAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtca > 1:1423158‑M2/1‑86 (MQ=255) tAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtca > 1:2979610‑M2/1‑86 (MQ=255) tgatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTcac > 1:3309492‑M1/54‑91 (MQ=255) gatatcatacaaagctgtactgtcttatttttgtgacacaatatattgcgttTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTcaca > 1:1504433‑M1/53‑91 (MQ=255) gacattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaa > 1:2698129‑M2/25‑91 (MQ=255) cattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaa > 1:2281971‑M2/23‑91 (MQ=255) cattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaa > 1:2317814‑M2/23‑91 (MQ=255) cattagtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACaaaa > 1:1917603‑M2/23‑91 (MQ=255) cATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACActacatacagcatttgtcacaaaa < 1:3428113‑M1/91‑25 (MQ=255) cATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaa < 1:1581549‑M2/91‑11 (MQ=255) ttAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaat < 1:1306149‑M2/91‑13 (MQ=255) tAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaata > 1:1344899‑M2/1‑78 (MQ=255) agtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATaa > 1:711571‑M2/19‑91 (MQ=255) gtgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataag < 1:1686742‑M2/91‑16 (MQ=255) gtgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataag < 1:3950192‑M2/91‑16 (MQ=255) gtcaacactaatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAg > 1:247163‑M2/18‑91 (MQ=255) tgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataaga < 1:4067373‑M2/91‑17 (MQ=255) tgtTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataaga > 1:813195‑M2/1‑75 (MQ=255) tgtAGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaaaaaga > 1:3268665‑M2/1‑75 (MQ=255) ttGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTGTTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagaca < 1:4138336‑M2/91‑19 (MQ=255) ttGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGtgtcacaaaaataagaca < 1:209966‑M2/91‑19 (MQ=255) taatgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGc < 1:1653234‑M2/82‑1 (MQ=255) atgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCaa > 1:2214438‑M2/8‑91 (MQ=255) tgtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAat < 1:3054725‑M2/85‑1 (MQ=255) gtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAata > 1:1462853‑M2/6‑91 (MQ=255) gtcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAata > 1:509167‑M2/6‑91 (MQ=255) tcttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAatat < 1:924425‑M2/87‑1 (MQ=255) ttTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAatatat > 1:2735744‑M2/3‑91 (MQ=255) tttGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGt > 1:281122‑M2/1‑90 (MQ=255) ttgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtg < 1:744667‑M2/91‑3 (MQ=255) tgttgATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGGCAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgt < 1:4102135‑M2/91‑4 (MQ=255) gttgATTGTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtc > 1:1150349‑M2/1‑87 (MQ=255) gATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca > 1:1000‑M2/1‑84 (MQ=255) gATCTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcaca > 1:3350531‑M2/1‑84 (MQ=255) tttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaa < 1:3544394‑M2/91‑11 (MQ=255) ttttATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTATCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaa > 1:3585278‑M2/1‑80 (MQ=255) tataAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataa < 1:205570‑M2/91‑15 (MQ=255) taAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataaga < 1:294768‑M2/91‑17 (MQ=255) taAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataaga < 1:4026658‑M2/91‑17 (MQ=255) aaaGTACTGTCTAATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagt < 1:3200094‑M2/91‑21 (MQ=255) aaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagta < 1:1985714‑M2/91‑22 (MQ=255) aaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagta > 1:2174031‑M2/1‑70 (MQ=255) aaGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGtgtcacaaaaataagacagta < 1:3661858‑M2/91‑22 (MQ=255) gTACTGTCTTATTTTTGTGACAcaatatattgcgtttgtcttatttttgtgacactacatacagcatttgtcacaaaaataagacagtact > 1:387982‑M1/1‑22 (MQ=255) TACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAg < 1:2619724‑M1/91‑1 (MQ=255) ACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGc > 1:1387238‑M1/1‑91 (MQ=255) tGTCTTATTTTTGTGACActacatacagcatttgtcacaaaaataagacagtacttttttataaaaaatcaacaaaaaagacattagtcaa < 1:850949‑M1/91‑74 (MQ=255) | ACCGCAATTTGGAATTTCGAAAAGCAAAATTATTATTTAAGACATTAGTGTTGACTAATGTCTTTTTTGTTGATTTTTTATAAAAAAGTACTGTCTTATTTTTGTGACAAATGCTGTATGTAGTGTCACAAAAATAAGACAAACGCAATATATTGTGTCACAAAAATAAGACAGTACAGCTT > NC_012417/949‑1130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |