| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 598649 | 65 (0.660) | 8 (0.100) | 5/124 | NT | 12.1% | intergenic (+198/+84) | tuf/yxeP_2 | Elongation factor Tu/putative hydrolase YxeP |
| ? | USA300TCH1516_ALE | = 598668 | 66 (0.870) | intergenic (+217/+65) | tuf/yxeP_2 | Elongation factor Tu/putative hydrolase YxeP | |||||
Only 100 of 139 total aligned reads displayed.
ATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTT > USA300TCH1516_ALE/598559‑598739 | gaAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAACATTGTTGAGTCTTGGACATTGTAAAATGCCCCCTTCAAAGttt > 1:4146225/1‑91 (MQ=255) gaAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGttt < 1:2388862/91‑1 (MQ=255) gaAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGttt < 1:328092/91‑1 (MQ=255) aaaGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGtttt < 1:61561/91‑1 (MQ=255) aaaGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGtttt < 1:3719190/91‑1 (MQ=255) aaaGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGtttt < 1:3718305/91‑1 (MQ=255) gactgactAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCAt < 1:1858453/91‑1 (MQ=255) ctgactAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCAttt > 1:1181236/1‑91 (MQ=255) tgactAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCAtttt < 1:981189/91‑1 (MQ=255) tgactAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCAtttt > 1:1764585/1‑91 (MQ=255) gactAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCAttttt < 1:1014719/91‑1 (MQ=255) taataaAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaa < 1:1584126‑M1/91‑14 (MQ=255) taataaAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCa > 1:1068851/1‑91 (MQ=255) taataaAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCa > 1:2370192/1‑91 (MQ=255) taataaAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCa > 1:2370316/1‑91 (MQ=255) aataaAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCaa < 1:33370/91‑1 (MQ=255) aaaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTc > 1:1815717/1‑91 (MQ=255) aaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaaatgaaa < 1:2023975‑M1/91‑20 (MQ=255) aaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCt < 1:380284/91‑1 (MQ=255) aaCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCt < 1:3815602/91‑1 (MQ=255) aCTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTa < 1:499660‑M2/91‑2 (MQ=255) cTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaaatgaaaac < 1:993900‑M1/91‑22 (MQ=255) cTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaaatgaaaac < 1:218740‑M1/91‑22 (MQ=255) cTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTac > 1:3077952‑M2/1‑89 (MQ=255) ttATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTact < 1:2349200‑M2/91‑4 (MQ=255) tataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaaatgaaaactt < 1:3154235‑M1/91‑24 (MQ=255) tataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaaatgaaaactt < 1:3154189‑M1/91‑24 (MQ=255) ataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTacttt < 1:3738328‑M2/91‑6 (MQ=255) ataACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTacttt > 1:3898036‑M2/1‑86 (MQ=255) cTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaag > 1:3363501‑M2/1‑82 (MQ=255) cTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaag < 1:129499‑M2/91‑10 (MQ=255) tGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagg < 1:398673‑M2/91‑11 (MQ=255) gATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTagacattgaaaaaatgaaaactttgaaggg < 1:2684282‑M1/91‑31 (MQ=255) gATAATACTGTTTAAATAAAATTGTTGAGTCCTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaaggg > 1:1339435‑M2/1‑80 (MQ=255) taataCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagggag > 1:78242‑M2/1‑78 (MQ=255) aataCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagggagc < 1:32564‑M2/91‑15 (MQ=255) aataCTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagggagc > 1:654698‑M2/1‑77 (MQ=255) aCTGTTTAAATAAAATTGTTGAGCCTTGGACACTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagggggcatt < 1:1218568‑M2/91‑18 (MQ=255) cTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagggagcattt < 1:2887569‑M2/91‑19 (MQ=255) tttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAt > 1:3579147/1‑91 (MQ=255) tttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAt > 1:2886978/1‑91 (MQ=255) ttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAtt > 1:4113040/1‑91 (MQ=255) ttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAtt < 1:3143707/91‑1 (MQ=255) ttAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCAtt < 1:3143487/91‑1 (MQ=255) aataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt < 1:1694739/91‑1 (MQ=255) aataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGt < 1:1694464/91‑1 (MQ=255) ataaaATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGtt < 1:689883/91‑1 (MQ=255) taacATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGttt < 1:188449/91‑1 (MQ=255) aaaTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTAt < 1:2871042/91‑1 (MQ=255) aaTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg > 1:510601/1‑91 (MQ=255) aaTTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg > 1:2091245/1‑91 (MQ=255) aaTTGTTGAGTCTTGGACATTGTAAAATGCTCCATTCGAAGTTTTCCTTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATg > 1:3308645/1‑91 (MQ=38) tgttgAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtct < 1:2364260/91‑1 (MQ=255) tgttgAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtct < 1:3469194/91‑1 (MQ=255) tgttgAGTCTTGGACATTGTAAAATACTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtct < 1:3861434/91‑1 (MQ=255) gttgAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGtctc > 1:3070350/1‑91 (MQ=255) tCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTc < 1:4037508/91‑1 (MQ=255) tCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTc < 1:1962892/91‑1 (MQ=255) tCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTc < 1:1962907/91‑1 (MQ=255) cTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCa < 1:3883200/91‑1 (MQ=255) aCATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCt < 1:109318/91‑1 (MQ=255) cATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCtt > 1:840675/1‑91 (MQ=255) cATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCtt > 1:2867393/1‑91 (MQ=255) ttGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTc < 1:2891527/91‑1 (MQ=255) tAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaat < 1:1807182/91‑1 (MQ=255) aaaaTGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaatt < 1:2506818/91‑1 (MQ=255) aaTGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCaattaa > 1:685663/1‑91 (MQ=255) aaTGCCCCCTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacagtgtccaaggctcaacaattttatttaaacagt < 1:1218568‑M1/91‑75 (MQ=255) aTGCTCCCTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagta < 1:2539083‑M1/91‑76 (MQ=255) gCTCCCTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtatt < 1:32564‑M1/91‑78 (MQ=255) gCTCCCTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtatt > 1:654698‑M1/1‑14 (MQ=255) gCTCCCTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtatt > 1:653952‑M1/1‑14 (MQ=255) cTCCCTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtatta > 1:78242‑M1/1‑13 (MQ=255) cTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTa > 1:2972181/1‑91 (MQ=255) cccTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaggactcaacaattttatttaaacagtattatc > 1:1339435‑M1/1‑11 (MQ=255) cccTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatc > 1:327171‑M1/1‑11 (MQ=255) cccTTCAAAGTTTTCATTTTTTCAATGTCTactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatc < 1:2684282‑M2/91‑62 (MQ=255) cccTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTaaa < 1:2198759/91‑1 (MQ=255) ccTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatca < 1:398673‑M1/91‑82 (MQ=255) cTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcag > 1:3363501‑M1/1‑9 (MQ=255) cTTCAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcag < 1:129499‑M1/91‑83 (MQ=255) ttCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGc < 1:1601895/91‑1 (MQ=255) tCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCt < 1:4057449/91‑1 (MQ=255) cAAAGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagtta < 1:1768428‑M1/91‑86 (MQ=255) cAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCtt > 1:3041993/1‑91 (MQ=255) aaGTTTTCATTTTTTCAATGTCTactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttata < 1:3154235‑M2/91‑69 (MQ=255) aaGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTaa < 1:1525575/91‑1 (MQ=255) aGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataa < 1:2420670‑M1/91‑89 (MQ=255) aGTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataa < 1:2349200‑M1/91‑89 (MQ=255) aGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAt > 1:4147018/1‑91 (MQ=255) aGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGCTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAt > 1:246077/1‑91 (MQ=255) gTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataag < 1:30807‑M1/91‑90 (MQ=255) gTagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataag < 1:1718130‑M1/91‑90 (MQ=255) gTTTTCATTTTTTCAATGTCTactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataag < 1:219096‑M2/91‑71 (MQ=255) gTTTTCATTTTTTCAATGTCTactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataag < 1:218740‑M2/91‑71 (MQ=255) gTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAtt < 1:2110137/91‑1 (MQ=255) gTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAtt < 1:743349/91‑1 (MQ=255) gTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAtt < 1:2402926/91‑1 (MQ=255) ttttCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAAttt > 1:3472257/1‑91 (MQ=255) tagacattgaaaaaatgaaaactttgaagggagcattttacaatgtccaagactcaacaattttatttaaacagtattatcagttataagt < 1:499660‑M1/91‑91 (MQ=255) | ATGAAAGACTGACTAATAAAACTTATAACTGATAATACTGTTTAAATAAAATTGTTGAGTCTTGGACATTGTAAAATGCTCCCTTCAAAGTTTTCATTTTTTCAATGTCTACTTTGAAGGGAGCATTTCATTAGTTTATGTCTCAGATTCATATCTTTCAATTAATTTAAATGCTTAATTT > USA300TCH1516_ALE/598559‑598739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |