| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 671622 = | 56 (0.570) | 16 (0.180) | 5/146 | NT | 25.4% | intergenic (+247/‑141) | argS/nth_1 | Arginine‑‑tRNA ligase/Endonuclease III |
| ? | USA300TCH1516_ALE | = 891842 | 43 (0.480) | intergenic (+260/‑479) | USA300HOU_RS04385/rnmV_2 | hypothetical protein/Ribonuclease M5 | |||||
Only 100 of 113 total aligned reads displayed.
GACATAAATCAATGTTCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGAAATAAAT > USA300TCH1516_ALE/671532‑671712 | gcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttca > 1:109071‑M1/91‑91 (MQ=255)gcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttca < 1:2426381‑M1/1‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:3105959‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:947468‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg > 1:2778915‑M1/90‑91 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:2377293‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:1198980‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:2377050‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:2345319‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg < 1:218399‑M1/2‑1 (MQ=255) cattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAg > 1:3305979‑M1/90‑91 (MQ=255) attgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGt < 1:1034538‑M1/3‑1 (MQ=255) attgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGt < 1:3109609‑M1/3‑1 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:1226882‑M1/88‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:603121‑M1/88‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:3182231‑M1/88‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:2577849‑M1/88‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:1698035‑M1/88‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:2883753‑M1/88‑91 (MQ=255) ttgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc > 1:3571255‑M1/88‑91 (MQ=255) ttgcccgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTc < 1:2602117‑M1/4‑1 (MQ=255) tgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCa > 1:2897965‑M1/87‑91 (MQ=255) tgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCa > 1:1555555‑M1/87‑91 (MQ=255) tgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCa > 1:2850368‑M1/87‑91 (MQ=255) gcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCaa < 1:2358653‑M1/6‑1 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:293002‑M1/85‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:1095927‑M1/85‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:350008‑M1/85‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:3797662‑M1/85‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:3797681‑M1/85‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:1095845‑M1/85‑91 (MQ=255) cctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAAc > 1:292497‑M1/85‑91 (MQ=255) tCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCcggc > 1:1582552/1‑91 (MQ=31) cTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCcggcg > 1:4110077/1‑91 (MQ=32) cTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCcggcg > 1:2177015/1‑91 (MQ=32) tATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCcggcgg < 1:3037960/91‑1 (MQ=33) tATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCcggcgg < 1:607820/91‑1 (MQ=33) aTGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCggg > 1:607018/1‑91 (MQ=34) aTGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCggg > 1:2886120/1‑91 (MQ=34) ctACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGcccc > 1:2637018/1‑91 (MQ=37) ctACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGcccc > 1:1483362/1‑91 (MQ=39) ctACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGcccc > 1:2201421/1‑91 (MQ=39) tACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCca > 1:929687/1‑91 (MQ=37) cAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCcaac > 1:280837/1‑91 (MQ=39) aaaGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCcaaca < 1:3691498/91‑1 (MQ=39) aGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACaaa > 1:451535/1‑91 (MQ=39) aGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACaaa < 1:1989270/91‑1 (MQ=39) aGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACaaa < 1:1989078/91‑1 (MQ=39) gTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAag > 1:1945601/1‑91 (MQ=39) gTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAag > 1:1945422/1‑91 (MQ=39) ttATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAaga < 1:3353683/91‑1 (MQ=39) tataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAagag > 1:655551/1‑91 (MQ=39) tataATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAagag > 1:655552/1‑91 (MQ=39) taATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGaa < 1:3002712/91‑1 (MQ=38) aTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAt > 1:3075628/1‑91 (MQ=35) aTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAt < 1:308654/91‑1 (MQ=35) aTGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAt > 1:3075394/1‑91 (MQ=35) tGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAtt > 1:2703693/1‑91 (MQ=34) tGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAAtt > 1:1382736/1‑91 (MQ=34) ggCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTg > 1:3463078/1‑91 (MQ=34) gCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACCAAGAGAAATTgg < 1:3185981/91‑1 (MQ=21) cAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGa > 1:623292/1‑91 (MQ=34) cAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGa < 1:2498217/91‑1 (MQ=33) cAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGa > 1:2350307/1‑91 (MQ=34) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt < 1:3842440/91‑1 (MQ=34) agtagtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAt < 1:98014/91‑1 (MQ=34) gtagtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAtt < 1:2435744/91‑1 (MQ=34) aggttgactagaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACTACTGCCGGCGGGGCCCCAACAAAGAGAAATTGGAtt < 1:1609909‑M1/44‑1 (MQ=255) aggttgactagaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACTACTGCCGGCGGGGCCCCAACAAAGAGAAATTGGAtt < 1:1610211‑M1/44‑1 (MQ=255) ggttgactagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACTACTGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTc < 1:2154256‑M1/45‑1 (MQ=255) agtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTcc > 1:1473504/1‑91 (MQ=34) agtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTcc < 1:3109083/91‑1 (MQ=34) agtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTcc < 1:1161761/91‑1 (MQ=34) agtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTcc > 1:182977/1‑91 (MQ=34) gtTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTccc > 1:2889559/1‑91 (MQ=34) ttGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCa < 1:685133/91‑1 (MQ=34) tGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCaa > 1:3500460/1‑91 (MQ=34) gactagaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGAGTCCCAAt < 1:2065201‑M1/49‑1 (MQ=255) actagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACTACTGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAt < 1:402503‑M1/50‑1 (MQ=255) cTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAttt > 1:90645/1‑91 (MQ=34) cTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAAttt > 1:121231/1‑91 (MQ=34) tagaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAATAAAGAGAAATTGGATTCCCAATTTc < 1:3877589‑M1/52‑1 (MQ=255) agaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCt < 1:1790640‑M1/53‑1 (MQ=255) aattgaaaaaagcttgttacaagcgaattttcaattctAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCt < 1:1675905‑M1/53‑1 (MQ=255) gaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTa < 1:1894789‑M1/54‑1 (MQ=255) gaattgaaaaaagcttgttacaagcgcattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTa < 1:1895638‑M1/54‑1 (MQ=255) gaattgaaaaaagcttgttacaagcgaattttcgttcAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTa < 1:2021682‑M1/54‑1 (MQ=255) cGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGGAATCCAATTTCtctt < 1:109483/91‑4 (MQ=11) aaTTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACa < 1:568202/91‑1 (MQ=34) aaagcttgttacaagcgcattttcaattctAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACaa < 1:1752543‑M1/61‑1 (MQ=255) aTTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACaa > 1:1204459/1‑91 (MQ=33) ttCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAAt > 1:1040095/1‑91 (MQ=32) ttCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAAt < 1:1376877/91‑1 (MQ=32) tCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGGCAATg < 1:1346420/91‑1 (MQ=14) tCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATg < 1:790926/91‑1 (MQ=31) tCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATg < 1:3390177/91‑1 (MQ=31) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat < 1:1190039‑M1/91‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat < 1:1388343‑M1/91‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat < 1:4088813‑M1/91‑1 (MQ=255) AGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGaaataaat > 1:979059‑M1/1‑91 (MQ=255) | GACATAAATCAATGTTCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCT‑TGCCGGCGGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGGTGGGACGACGAAATAAAT > USA300TCH1516_ALE/671532‑671712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |