BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 744697	92 (0.940)	8 (0.090)	6/152	NT	7.5%	coding (1838/1980 nt)	melR_1	Melibiose operon regulatory protein
*	?	USA300TCH1516_ALE	= 744717	109 (1.170)	8 (0.090)	6/152	NT	7.5%	coding (1858/1980 nt)	melR_1	Melibiose operon regulatory protein

Only 100 of 130 total aligned reads displayed.

TTATCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATA  >  USA300TCH1516_ALE/744607‑744787

ttATCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTG                                                                                            <  1:2931654‑M1/91‑1 (MQ=255)

 tATCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTgg                                                                                           <  1:1697126/91‑1 (MQ=255)

  aTCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGc                                                                                          >  1:2402177/1‑91 (MQ=255)

  aTCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGc                                                                                          >  1:2347260/1‑91 (MQ=255)

  aTCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGc                                                                                          >  1:1969431/1‑91 (MQ=255)

       atatGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTg                                                                                     <  1:979603/91‑1 (MQ=255)

       atatGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTg                                                                                     >  1:2184690/1‑91 (MQ=255)

       atatGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTg                                                                                     >  1:1817952/1‑91 (MQ=255)

        tatGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGa                                                                                    >  1:45303/1‑91 (MQ=255)

        tatGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGa                                                                                    >  1:2908092/1‑91 (MQ=255)

           gTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATag                                                                                 <  1:2547979/91‑1 (MQ=255)

           gTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATag                                                                                 <  1:2335362/91‑1 (MQ=255)

               cGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATagagag                                                                             >  1:1514767/1‑91 (MQ=255)

                gAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGc                                                                            <  1:738189/91‑1 (MQ=255)

                  aaCCAAAATGCGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCga                                                                          <  1:3974618/91‑1 (MQ=255)

                  aaCCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactc                                                                          <  1:2890775‑M1/91‑19 (MQ=255)

                  aaCCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactc                                                                          <  1:1110737‑M1/91‑19 (MQ=255)

                  aaCCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCga                                                                          <  1:1646480/91‑1 (MQ=255)

                  aaCCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCga                                                                          <  1:2494408/91‑1 (MQ=255)

                   aCCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactcg                                                                         <  1:1050820‑M1/91‑20 (MQ=255)

                    ccAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactcgc                                                                        <  1:1350328‑M1/91‑21 (MQ=255)

                     cAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactcgcc                                                                       <  1:2500419‑M1/91‑22 (MQ=255)

                       aaaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGAcaa                                                                     <  1:1203614‑M2/91‑4 (MQ=255)

                        aaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGAcaat                                                                    >  1:1162021‑M2/1‑87 (MQ=255)

                        aaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCAAGTGATAGAGAGCGAGAcaat                                                                    <  1:406176‑M2/91‑5 (MQ=255)

                        aaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCAAGTGATAGAGAGCGAGAcaat                                                                    <  1:406109‑M2/91‑5 (MQ=255)

                        aaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCAAGTGATAGAGAGCGAGAcaat                                                                    <  1:406074‑M2/91‑5 (MQ=255)

                         aTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAAtt                                                                   >  1:2715286/1‑91 (MQ=255)

                         aTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAAtt                                                                   >  1:636961/1‑91 (MQ=255)

                            cGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactcgccaatcata                                                                <  1:397161‑M1/91‑29 (MQ=255)

                            cGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATg                                                                >  1:1317927/1‑91 (MQ=255)

                              aaaaCAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAg                                                              <  1:137131/91‑1 (MQ=255)

                               aaaCAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGt                                                             >  1:1274201/1‑91 (MQ=255)

                               aaaCAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGt                                                             >  1:3432032/1‑91 (MQ=255)

                                  cAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAAt                                                          >  1:708698/1‑91 (MQ=255)

                                   aGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAAtt                                                         <  1:960599/91‑1 (MQ=255)

                                    gTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGtctcgctctctatcactcgccaatcataaataacaa                                                        <  1:1064278‑M1/91‑37 (MQ=255)

                                    gTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAAttt                                                        >  1:2706182/1‑91 (MQ=255)

                                      tattatTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTg                                                      >  1:1500543/1‑91 (MQ=255)

                                      tattatTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTg                                                      >  1:1500509/1‑91 (MQ=255)

                                        ttattCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAg                                                    >  1:1478318/1‑91 (MQ=255)

                                         tattCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAgg                                                   <  1:4116844/91‑1 (MQ=255)

                                            tCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATa                                                <  1:2940226/91‑1 (MQ=255)

                                            tCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATa                                                <  1:1365804/91‑1 (MQ=255)

                                            tCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATa                                                <  1:729948/91‑1 (MQ=255)

                                            tCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATa                                                >  1:1830476/1‑91 (MQ=255)

                                             cTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAg                                               <  1:801424/91‑1 (MQ=255)

                                              tATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGt                                              <  1:1437843/91‑1 (MQ=255)

                                               aTTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTc                                             >  1:1783225/1‑91 (MQ=255)

                                                tttttGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCa                                            <  1:1883638/91‑1 (MQ=255)

                                                 ttttGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTGATTTTGAGGATAGTCaa                                           >  1:3549344/1‑91 (MQ=255)

                                                 ttttGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCaa                                           >  1:510337/1‑91 (MQ=255)

                                                 ttttGACATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCaa                                           >  1:3230066/1‑91 (MQ=255)

                                                     gATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGttt                                       >  1:1432361/1‑91 (MQ=255)

                                                       tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                     >  1:1515567/1‑91 (MQ=255)

                                                       tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                     >  1:3656424/1‑91 (MQ=255)

                                                       tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                     <  1:1508153/91‑1 (MQ=255)

                                                       tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                     <  1:2433634/91‑1 (MQ=255)

                                                       tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                     >  1:792743/1‑91 (MQ=255)

                                                       tataGAGAATTAATATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                     >  1:3173621/1‑91 (MQ=255)

                                                        ataGAGAATTATTCTTGTCTTGTTATTTATGATTGGCGAGTGAGAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtata                                    <  1:4153350/91‑1 (MQ=255)

                                                         taGAGAATTATTATTGTCTTGTTATGTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGGGTAATTTTGAGGATAGTCAAGTTtatat                                   <  1:3876005/91‑1 (MQ=255)

                                                          agagAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtatata                                  <  1:210335/91‑1 (MQ=255)

                                                             gaATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAAt                               <  1:4091516/91‑1 (MQ=255)

                                                             gaATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAAt                               >  1:2314074/1‑91 (MQ=255)

                                                                   ttattGTCTTGTTATTTATGATTGGCGAGTGATGGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                         >  1:2864341/1‑91 (MQ=255)

                                                                   ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                         <  1:2769899/91‑1 (MQ=255)

                                                                   ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                         <  1:2241353/91‑1 (MQ=255)

                                                                   ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                         >  1:3866892/1‑91 (MQ=255)

                                                                   ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                         <  1:2240817/91‑1 (MQ=255)

                                                                    tattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaaa                        <  1:2298671/91‑1 (MQ=255)

                                                                      ttGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAAc                      <  1:3383518/91‑1 (MQ=255)

                                                                         tCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAAt                   <  1:3051296/91‑1 (MQ=255)

                                                                          cTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATg                  >  1:1132839/1‑91 (MQ=255)

                                                                           ttGTTATTTATGATTGGCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataac                 <  1:1064278‑M2/91‑56 (MQ=255)

                                                                            tGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAATAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGtt                <  1:3294727/91‑1 (MQ=255)

                                                                               tatttatGATTGGCGAGTGATAGAGAGCGAGACAATTCTGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTa             >  1:3493262/1‑91 (MQ=255)

                                                                                  ttatGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAAc          >  1:2434812/1‑91 (MQ=255)

                                                                                   tatGATTGGCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcg         <  1:397161‑M2/91‑64 (MQ=255)

                                                                                    atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa        >  1:363627/1‑91 (MQ=255)

                                                                                    atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa        >  1:1201273/1‑91 (MQ=255)

                                                                                    atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa        >  1:363628/1‑91 (MQ=255)

                                                                                    atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa        <  1:3083162/91‑1 (MQ=255)

                                                                                     tGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGAt       >  1:3884766/1‑91 (MQ=255)

                                                                                     tGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGAt       >  1:125688/1‑91 (MQ=255)

                                                                                      gATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATa      <  1:409338/91‑1 (MQ=255)

                                                                                      gATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATa      >  1:311965/1‑91 (MQ=255)

                                                                                      gATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATa      >  1:312058/1‑91 (MQ=255)

                                                                                       aTTGtctcgctctctatcacttgccaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtatt     <  1:406109‑M1/91‑88 (MQ=255)

                                                                                       aTTGtctcgctctctatcacttgccaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtatt     <  1:406074‑M1/91‑88 (MQ=255)

                                                                                       aTTGtctcgctctctatcactcgccaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtatt     >  1:1162021‑M1/1‑4 (MQ=255)

                                                                                       aTTGtctcgctctctatcactcgccaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtatt     >  1:1612587‑M1/1‑4 (MQ=255)

                                                                                        ttGtctcgctctctatcactcgccaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattt    <  1:1203614‑M1/91‑89 (MQ=255)

                                                                                        ttGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATaaa    <  1:310082/91‑1 (MQ=255)

                                                                                        ttGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATaaa    <  1:2038679/91‑1 (MQ=255)

                                                                                        ttGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATaaa    <  1:2038236/91‑1 (MQ=255)

                                                                                        ttGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATaaa    <  1:1463741/91‑1 (MQ=255)

                                                                                         tGtctcgctctctatcactcaccaatcataaataacaagacaataataattctctatataaaaaatagaataataactgttttcgtatttt   <  1:1323296‑M1/91‑90 (MQ=255)

                                                                                          ggCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttg  <  1:2500419‑M2/91‑71 (MQ=255)

                                                                                          ggCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAata  >  1:972304/1‑91 (MQ=255)

TTATCGAATATGTCTCGAAACCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATA  >  USA300TCH1516_ALE/744607‑744787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.