BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 744697	92 (0.940)	8 (0.090)	6/152	NT	7.5%	coding (1838/1980 nt)	melR_1	Melibiose operon regulatory protein
*	?	USA300TCH1516_ALE	= 744717	109 (1.170)	8 (0.090)	6/152	NT	7.5%	coding (1858/1980 nt)	melR_1	Melibiose operon regulatory protein

Only 100 of 139 total aligned reads displayed.

CCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGAAACAT  >  USA300TCH1516_ALE/744627‑744807

ccAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCgaga                                                                                            >  1:882773/1‑91 (MQ=255)

  aaaaTACGAAAACAGTTATTATTCTATTTTTTATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGTGAGTGATAGAGAGCGAGAca                                                                                          <  1:1323296‑M2/91‑3 (MQ=255)

    aaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCAAGTGATAGAGAGCGAGAcaat                                                                                        <  1:406109‑M2/91‑5 (MQ=255)

    aaTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCAAGTGATAGAGAGCGAGAcaat                                                                                        <  1:406176‑M2/91‑5 (MQ=255)

     aTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAAtt                                                                                       >  1:636961/1‑91 (MQ=255)

     aTACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAAtt                                                                                       >  1:2715286/1‑91 (MQ=255)

        cGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATg                                                                                    >  1:1317927/1‑91 (MQ=255)

          aaaaCAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAg                                                                                  <  1:137131/91‑1 (MQ=255)

           aaaCAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGt                                                                                 >  1:1274201/1‑91 (MQ=255)

           aaaCAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGt                                                                                 >  1:3432032/1‑91 (MQ=255)

              cAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAAt                                                                              >  1:708698/1‑91 (MQ=255)

                gTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAAttt                                                                            >  1:2706182/1‑91 (MQ=255)

                  tattatTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTg                                                                          >  1:1244393/1‑91 (MQ=255)

                  tattatTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTg                                                                          <  1:737937/91‑1 (MQ=255)

                  tattatTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTg                                                                          >  1:1500543/1‑91 (MQ=255)

                    ttattCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAg                                                                        >  1:1478318/1‑91 (MQ=255)

                     tattCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAgg                                                                       <  1:4116844/91‑1 (MQ=255)

                        tCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATa                                                                    >  1:1830476/1‑91 (MQ=255)

                        tCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATa                                                                    <  1:729948/91‑1 (MQ=255)

                         cTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAg                                                                   <  1:801424/91‑1 (MQ=255)

                          tATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGt                                                                  <  1:1437843/91‑1 (MQ=255)

                           aTTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTc                                                                 >  1:1783225/1‑91 (MQ=255)

                           aTTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTc                                                                 >  1:3078596/1‑91 (MQ=255)

                            tttttGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCa                                                                >  1:1473827/1‑91 (MQ=255)

                             ttttGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTGATTTTGAGGATAGTCaa                                                               >  1:3549344/1‑91 (MQ=255)

                             ttttGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCaa                                                               >  1:510337/1‑91 (MQ=255)

                             ttttGACATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCaa                                                               >  1:3230066/1‑91 (MQ=255)

                                 gATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGttt                                                           >  1:1432361/1‑91 (MQ=255)

                                   tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                                         >  1:3656424/1‑91 (MQ=255)

                                   tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                                         >  1:792743/1‑91 (MQ=255)

                                   tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                                         <  1:1508153/91‑1 (MQ=255)

                                   tataGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                                         >  1:1515567/1‑91 (MQ=255)

                                   tataGAGAATTAATATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtat                                                         >  1:3173621/1‑91 (MQ=255)

                                    ataGAGAATTATTCTTGTCTTGTTATTTATGATTGGCGAGTGAGAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtata                                                        <  1:4153350/91‑1 (MQ=255)

                                     taGAGAATTATTATTGTCTTGTTATGTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGGGTAATTTTGAGGATAGTCAAGTTtatat                                                       <  1:3876005/91‑1 (MQ=255)

                                      agagAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTtatata                                                      <  1:210335/91‑1 (MQ=255)

                                         gaATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAAt                                                   >  1:2314074/1‑91 (MQ=255)

                                            ttattattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAAtttt                                                >  1:982064/1‑91 (MQ=255)

                                              attattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaa                                              >  1:2106809/1‑91 (MQ=255)

                                               ttattGTCTTGTTATTTATGATTGGCGAGTGATGGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                                             >  1:2864341/1‑91 (MQ=255)

                                               ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                                             <  1:2240817/91‑1 (MQ=255)

                                               ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                                             <  1:2241353/91‑1 (MQ=255)

                                               ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                                             <  1:2931280/91‑1 (MQ=255)

                                               ttattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaa                                             >  1:1165471/1‑91 (MQ=255)

                                                tattGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTaaaa                                            <  1:2298651/91‑1 (MQ=255)

                                                  ttGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAAc                                          <  1:3383518/91‑1 (MQ=255)

                                                    gTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATGGTCAAGTTTATATAAATTTTAAAAACaa                                        <  1:1817806/91‑1 (MQ=255)

                                                    gTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACaa                                        <  1:2019590/91‑1 (MQ=255)

                                                    gTCTTGTTATTTATGATTGGCGAGTCATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACaa                                        <  1:3853322/91‑1 (MQ=255)

                                                      cTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATg                                      >  1:1132839/1‑91 (MQ=255)

                                                       ttGTTATTTATGATTGGCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataac                                     <  1:1064278‑M2/91‑56 (MQ=255)

                                                              ttatGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAAc                              >  1:2434812/1‑91 (MQ=255)

                                                              ttatGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAACTTTATATAAATTTTAAAAACAATGTTTTAAAc                              >  1:3537793/1‑91 (MQ=255)

                                                               tatGATTGGCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcg                             <  1:397161‑M2/91‑64 (MQ=255)

                                                                atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa                            >  1:363627/1‑91 (MQ=255)

                                                                atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa                            >  1:1201273/1‑91 (MQ=255)

                                                                atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa                            >  1:363628/1‑91 (MQ=255)

                                                                atGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGa                            <  1:3083162/91‑1 (MQ=255)

                                                                 tGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGAt                           >  1:125688/1‑91 (MQ=255)

                                                                 tGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGAt                           >  1:3884766/1‑91 (MQ=255)

                                                                  gATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATa                          <  1:409338/91‑1 (MQ=255)

                                                                  gATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATa                          >  1:312058/1‑91 (MQ=255)

                                                                  gATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATa                          >  1:311965/1‑91 (MQ=255)

                                                                    ttGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATaaa                        <  1:1463741/91‑1 (MQ=255)

                                                                    ttGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATaaa                        <  1:2038236/91‑1 (MQ=255)

                                                                      ggCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttg                      <  1:2500419‑M2/91‑71 (MQ=255)

                                                                      ggCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAata                      >  1:972304/1‑91 (MQ=255)

                                                                       gCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttgg                     <  1:1350328‑M2/91‑72 (MQ=255)

                                                                       gCGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttgg                     <  1:3336672‑M2/91‑72 (MQ=255)

                                                                       gCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAatat                     >  1:1565354/1‑91 (MQ=255)

                                                                        cGAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttggt                    <  1:1050820‑M2/91‑73 (MQ=255)

                                                                        cGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATc                    >  1:1566358/1‑91 (MQ=255)

                                                                         gAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttggtt                   <  1:1110737‑M2/91‑74 (MQ=255)

                                                                         gAGTGATAGAGAGCGAGAcaatcataaataacaagacaataataattctctatatcaaaaatagaataataactgttttcgtattttggtt                   <  1:2890775‑M2/91‑74 (MQ=255)

                                                                         gAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCt                   <  1:149004/91‑1 (MQ=255)

                                                                         gAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCt                   <  1:2725191/91‑1 (MQ=255)

                                                                           gTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTaa                 >  1:3892127/1‑91 (MQ=255)

                                                                            tGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAAt                >  1:2257347/1‑91 (MQ=255)

                                                                            tGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAAt                >  1:3883664/1‑91 (MQ=255)

                                                                            tGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAAt                <  1:2991779/91‑1 (MQ=255)

                                                                             gATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAAtt               >  1:704666/1‑91 (MQ=255)

                                                                              aTAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTg              <  1:1529507/91‑1 (MQ=255)

                                                                              aTAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTg              <  1:3915630/91‑1 (MQ=255)

                                                                               tAGAGAGCGAGACAATTATGAGTAATTTTTAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGt             <  1:2307601/91‑1 (MQ=255)

                                                                               tAGAGAGCGAGACAATTATGAGTAATTTTAAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGt             <  1:2307728/91‑1 (MQ=255)

                                                                                agagagCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTa            >  1:2780360/1‑91 (MQ=255)

                                                                                agagagCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTa            <  1:1117297/91‑1 (MQ=255)

                                                                                agagagCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTa            <  1:3068093/91‑1 (MQ=255)

                                                                                agagagCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTa            >  1:316082/1‑91 (MQ=255)

                                                                                  agagCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAAt          <  1:2778957/91‑1 (MQ=255)

                                                                                    agCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAg        >  1:134561/1‑91 (MQ=255)

                                                                                    agCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAg        >  1:134923/1‑91 (MQ=255)

                                                                                     gCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGa       <  1:1398911/91‑1 (MQ=255)

                                                                                     gCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGa       <  1:1517777/91‑1 (MQ=255)

                                                                                     gCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGa       >  1:3842474/1‑91 (MQ=255)

                                                                                       gagaCAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGaaa     >  1:1010523/1‑91 (MQ=255)

                                                                                       gagaCAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGaaa     >  1:719782/1‑91 (MQ=255)

                                                                                       gagaCAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGaaa     >  1:2184045/1‑91 (MQ=255)

                                                                                         gaCAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGAAACa   <  1:2107803/91‑1 (MQ=255)

                                                                                          aCAATTATAAGTAATTTTGAGGATAGTCAAGTTAATATAAATTTTAAAAACAATGTTTTAAACGATAAATAACTAATTGTAATAGAAACAt  <  1:298859/91‑1 (MQ=255)

CCAAAATACGAAAACAGTTATTATTCTATTTTTGATATAGAGAATTATTATTGTCTTGTTATTTATGATTGGCGAGTGATAGAGAGCGAGACAATTATGAGTAATTTTGAGGATAGTCAAGTTTATATAAATTTTAAAAACAATGTTTTAAACGATAAATATCTAATTGTAATAGAAACAT  >  USA300TCH1516_ALE/744627‑744807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.