| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 782414 = | 111 (1.130) | 8 (0.090) | 5/140 | NT | 7.9% | intergenic (‑209/+133) | USA300HOU_RS03820/USA300HOU_RS03825 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 782453 = | 90 (1.050) | intergenic (‑248/+94) | USA300HOU_RS03820/USA300HOU_RS03825 | hypothetical protein/hypothetical protein | |||||
Only 100 of 153 total aligned reads displayed.
CTAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGTAT > USA300TCH1516_ALE/782324‑782504 | cTAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAg < 1:1208318/91‑1 (MQ=255) tAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGt < 1:1747191/91‑1 (MQ=255) aaacaaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTa < 1:3071021/91‑1 (MQ=255) aaacaaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTa < 1:2322037/91‑1 (MQ=255) aaacaaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTa < 1:2322053/91‑1 (MQ=255) ctgagttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTAt > 1:165053‑M1/88‑91 (MQ=255) acaaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATg < 1:3915237/91‑1 (MQ=255) gagttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGa < 1:1830017‑M1/6‑1 (MQ=255) caaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGa > 1:1920322/1‑91 (MQ=255) caaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGa > 1:1919797/1‑91 (MQ=255) agttgaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAt > 1:3451381‑M1/85‑91 (MQ=255) agttcaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAt > 1:3456975‑M1/85‑91 (MQ=255) agttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAt > 1:1653442‑M1/85‑91 (MQ=255) aaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGAt > 1:3289310/1‑91 (MQ=255) aaacCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTACGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGAt > 1:3289249/1‑91 (MQ=255) gttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAtt > 1:3305161‑M1/84‑91 (MQ=255) gttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcATATGAtt < 1:2077805‑M1/8‑1 (MQ=255) ttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAttt < 1:2788223‑M1/9‑1 (MQ=255) ttaaacttttatttacaacatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGAttt < 1:2207737‑M1/9‑1 (MQ=255) tCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTa > 1:4091888/1‑91 (MQ=255) cAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTAc > 1:1800121/1‑91 (MQ=255) aaGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACa > 1:2206595/1‑91 (MQ=255) aGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACaa > 1:3051285/1‑91 (MQ=255) gCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAg < 1:2642507/91‑1 (MQ=255) gCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAg < 1:3386332/91‑1 (MQ=255) ctctAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGc < 1:3645807/91‑1 (MQ=255) tctAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCt > 1:1376375/1‑91 (MQ=255) ctAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTa > 1:1659259/1‑91 (MQ=255) aaaaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAggg < 1:3135348/91‑1 (MQ=255) aaaaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAggg > 1:2490530/1‑91 (MQ=255) aaaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAgggg > 1:1278191/1‑91 (MQ=255) aaaaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATGGAAAAAAGGAAAGTATGATTTCTACAAGCTAgggg < 1:2861038/91‑1 (MQ=255) aaaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAgggggg < 1:1393905/91‑1 (MQ=255) acatactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGc > 1:280474‑M1/66‑91 (MQ=255) aaTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGc < 1:3257566/91‑1 (MQ=255) aTTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCt < 1:607489/91‑1 (MQ=255) ttACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCtgt > 1:1074853/1‑91 (MQ=255) tactattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCtgt > 1:2707910‑M1/63‑91 (MQ=255) ctattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCTGTGa > 1:2575757‑M1/61‑91 (MQ=255) aCTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGa > 1:4064525/1‑91 (MQ=255) tattactatacattacaaatttttaaaatatacattacactcattactcaatggaaagcGTATGATTTCTACAAGCTAGGGGGGCTGTGaa > 1:3039243‑M1/60‑91 (MQ=255) cTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGaa > 1:1551658/1‑91 (MQ=255) cTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGaa > 1:515411/1‑91 (MQ=255) cTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGaa > 1:1462674/1‑91 (MQ=255) tgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAGATCATa > 1:1899902/1‑91 (MQ=255) tgCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATa > 1:1899232/1‑91 (MQ=255) ctctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGCAATCATACg < 1:2081438/91‑1 (MQ=255) ctctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACg > 1:503091/1‑91 (MQ=255) ctGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCt > 1:2770597/1‑91 (MQ=255) tGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCtt > 1:818288/1‑91 (MQ=255) cAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTc > 1:3989738/1‑91 (MQ=255) aaTCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTcc < 1:4002247/91‑1 (MQ=255) aaTCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTcc < 1:3738688/91‑1 (MQ=255) aTCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCa < 1:113032/91‑1 (MQ=255) tCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCAt > 1:693254/1‑91 (MQ=255) tCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCAt > 1:1659638/1‑91 (MQ=255) cTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCAtt > 1:423879/1‑91 (MQ=255) cTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCAtt > 1:423296/1‑91 (MQ=255) cTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCAtt > 1:3247263/1‑91 (MQ=255) tATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGa < 1:3602741/91‑1 (MQ=255) tATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGa < 1:2869634/91‑1 (MQ=255) aTGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAg > 1:374134/1‑91 (MQ=255) aTGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAg < 1:2893255/91‑1 (MQ=255) aTGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAg > 1:1632288/1‑91 (MQ=255) aTGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAg > 1:3087588/1‑91 (MQ=255) aTGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAg > 1:1692852/1‑91 (MQ=255) gggATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTa < 1:4109968/91‑1 (MQ=255) gggATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTa < 1:4109794/91‑1 (MQ=255) aTTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATg > 1:2732995/1‑91 (MQ=255) ttAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAg > 1:3407038/1‑91 (MQ=255) aTAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAgtgt > 1:3186464/1‑91 (MQ=255) aTAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAgtgt > 1:1810058/1‑91 (MQ=255) aGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTaa < 1:2125546/91‑1 (MQ=255) gTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAAt > 1:287863/1‑91 (MQ=255) gTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAAt > 1:2011704/1‑91 (MQ=255) ttGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATg < 1:330228/91‑1 (MQ=255) ttGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATg < 1:2189434/91‑1 (MQ=255) tGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGt > 1:934278/1‑91 (MQ=255) tGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGt < 1:1704770/91‑1 (MQ=255) gTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGta > 1:2063081/1‑91 (MQ=255) tatatataTTGAAAAAAGGAAGGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGtat > 1:3010557/1‑91 (MQ=255) atatatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGtata > 1:48978/1‑91 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:2214326/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:3694307/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:3928041/91‑1 (MQ=255) tatatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATAttt < 1:2214856/91‑1 (MQ=255) tatTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTa > 1:436913/1‑91 (MQ=255) atTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTaa < 1:3744288/91‑1 (MQ=255) ttGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTaaa < 1:3376066/91‑1 (MQ=255) aaaaaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAAt > 1:4070830/1‑91 (MQ=255) aaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTg < 1:73375/91‑1 (MQ=255) aaaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTg < 1:405166/91‑1 (MQ=255) aaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGt < 1:2620960/91‑1 (MQ=255) aaGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGt > 1:3142855/1‑91 (MQ=255) ggAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTaa > 1:4055929/1‑91 (MQ=255) aaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGt > 1:2186284/1‑91 (MQ=255) aaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGt < 1:1802178/91‑1 (MQ=255) aaGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGt > 1:756551/1‑91 (MQ=255) aGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGta > 1:847516/1‑91 (MQ=255) GTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGtat < 1:1003863‑M1/91‑1 (MQ=255) | CTAAACAAACCTCAAGCTCTAAAAAAATTTACTTATGTGCTCTGCAATCTTATGGGATTTAATAGTTGTATATATATTGAAAAAAGGAAAGTATGATTTCTACAAGCTAGGGGGGCTGTGAAATCATACGCTTTCCATTGAGTAATGAGTGTAATGTATATTTTAAAAATTTGTAATGTAT > USA300TCH1516_ALE/782324‑782504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |