BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	940816 =	101 (1.030)	10 (0.110)	6/148	NT	10.5%	coding (372/375 nt)	USA300HOU_RS04680	Putative esterase
*	?	USA300TCH1516_ALE	940879 =	77 (0.850)	10 (0.110)	6/148	NT	10.5%	coding (1151/1155 nt)	ptlE	Neopentalenolactone D synthase

Only 100 of 115 total aligned reads displayed.

GGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATT  >  USA300TCH1516_ALE/940790‑940969

 gTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATgcg                                                                                          >  1:3819158/1‑91 (MQ=255)

 gTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATgcg                                                                                          <  1:2974131/91‑1 (MQ=255)

   aCAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCt                                                                                        <  1:3263308/91‑1 (MQ=255)

   aCAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCt                                                                                        >  1:259317/1‑91 (MQ=255)

     aGTTGCTATTAATCCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCtat                                                                                      >  1:3184007/1‑91 (MQ=255)

      gTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCtata                                                                                     >  1:633088/1‑91 (MQ=255)

      gTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCtata                                                                                     >  1:1218207/1‑91 (MQ=255)

      gTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCtata                                                                                     >  1:872313/1‑91 (MQ=255)

       ttGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTatat                                                                                    >  1:4130491/1‑91 (MQ=255)

       ttGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTatat                                                                                    >  1:879528/1‑91 (MQ=255)

       ttGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTatat                                                                                    >  1:2338501/1‑91 (MQ=255)

         gCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATAttg                                                                                  <  1:1025468/91‑1 (MQ=255)

         gCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATAttg                                                                                  <  1:2640576/91‑1 (MQ=255)

          cTATTAATCCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATAttgt                                                                                 <  1:2073977/91‑1 (MQ=255)

          cTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATAttgt                                                                                 <  1:1468377/91‑1 (MQ=255)

             ttAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATtgttgt                                                                              >  1:3374344/1‑91 (MQ=255)

              tAAACCTTTAAAATAAAAGAACTGCTAGCTGAACTGTTATGAGATATTCATAACTACGGTTAGCAGTTTTTTTATGCGCTATATTGTTGTa                                                                             <  1:3686413/91‑1 (MQ=255)

               aaaCCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAg                                                                            >  1:3708185/1‑91 (MQ=255)

               aaaCCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAg                                                                            <  1:2533411/91‑1 (MQ=255)

               aaaCCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATAGTTGTAg                                                                            >  1:2069032/1‑91 (MQ=255)

                aaCCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGt                                                                           <  1:2205042/91‑1 (MQ=255)

                  ccTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGttt                                                                         >  1:3652536/1‑91 (MQ=255)

                     ttAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAg                                                                      >  1:803403/1‑91 (MQ=255)

                     ttAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAg                                                                      <  1:212101/91‑1 (MQ=255)

                       aaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGaa                                                                    <  1:2813078/91‑1 (MQ=255)

                       aaaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGaa                                                                    <  1:1096198/91‑1 (MQ=255)

                        aaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGaaa                                                                   <  1:2308887/91‑1 (MQ=255)

                        aaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGaaa                                                                   <  1:2308593/91‑1 (MQ=255)

                        aaataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGaaa                                                                   <  1:3253184/91‑1 (MQ=255)

                         aataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAAt                                                                  >  1:1850386/1‑91 (MQ=255)

                         aataaaaGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTCGTAGTTTTAGAAAt                                                                  <  1:4111930/91‑1 (MQ=255)

                           TAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGc                                                                >  1:2333437‑M1/1‑91 (MQ=255)

                            AAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCt                                                               <  1:951919‑M1/91‑1 (MQ=255)

                            AAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCt                                                               <  1:951781‑M1/91‑1 (MQ=255)

                               aaaactgctagccgtagttatgaatatctcataacatttcagctagcagttcttttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGt                                                            >  1:3126815‑M2/59‑91 (MQ=255)

                               aaaactgctagccgtagttatgaatatctcataacatttcagctagcagttcttttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGt                                                            >  1:3127688‑M2/59‑91 (MQ=255)

                               AGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGt                                                            >  1:904671‑M1/1‑91 (MQ=255)

                                gAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGtt                                                           >  1:1084305/1‑91 (MQ=255)

                                gAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGtt                                                           <  1:2990992/91‑1 (MQ=255)

                                gAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGtt                                                           <  1:190418/91‑1 (MQ=255)

                                aaactgctagccgtagttatgaatatctcataacatttcagctagcagttcttttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGtt                                                           >  1:3777106‑M2/58‑91 (MQ=255)

                                 aactgctagccgtagttatgaatatctcataacatttcagctagcagttcttttatGCGCTATATCGTTGTAGTTTTAGAAATGCTTGTTc                                                          >  1:3869184‑M2/57‑91 (MQ=255)

                                 aactgctagccgtagttatgaatatctcataacatttcagctagcagttcttttatGCGCTATATAGTTGTAGTTTTAGAAATGCTTGTTc                                                          >  1:3869501‑M2/57‑91 (MQ=255)

                                 aaCTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTc                                                          >  1:560544/1‑91 (MQ=255)

                                 aaCTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTc                                                          <  1:1404688/91‑1 (MQ=255)

                                  actgctagccgtagttatgaatatctcataacatttcagctagcagttcttttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCa                                                         >  1:3386500‑M2/56‑91 (MQ=255)

                                  aCTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCa                                                         <  1:682641/91‑1 (MQ=255)

                                   ctgctagccgtagttatgaatatctcataacatttcagctagcagtttttttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCaa                                                        >  1:3569475‑M2/55‑91 (MQ=255)

                                   cTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCaa                                                        >  1:1394741/1‑91 (MQ=255)

                                   cTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCaa                                                        <  1:2183320/91‑1 (MQ=255)

                                   cTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCaa                                                        <  1:2184116/91‑1 (MQ=255)

                                      cTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGc                                                     <  1:2302199/91‑1 (MQ=255)

                                       tAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCg                                                    >  1:4131264/1‑91 (MQ=255)

                                            gAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCgg                                               <  1:4046355/91‑1 (MQ=255)

                                               aTGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCANTGCGTTCGGCAg                                            >  1:76198/1‑91 (MQ=255)

                                               aTGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAg                                            >  1:1206189/1‑91 (MQ=255)

                                                   tATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCttt                                        <  1:830484/91‑1 (MQ=255)

                                                    aTGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTa                                       >  1:697759/1‑91 (MQ=255)

                                                     tGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTAc                                      >  1:3619328/1‑91 (MQ=255)

                                                       agaTATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACgg                                    <  1:944526/91‑1 (MQ=255)

                                                        gaTATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGc                                   <  1:1024553/91‑1 (MQ=255)

                                                          tatTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCa                                 >  1:518767/1‑91 (MQ=255)

                                                           atTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCAc                                <  1:1574853/91‑1 (MQ=255)

                                                           atTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCAc                                >  1:443245/1‑91 (MQ=255)

                                                            ttCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCAcc                               >  1:3933602/1‑91 (MQ=255)

                                                             ataacatttcagctagcagttcttttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCAccc                              >  1:2054588‑M2/29‑91 (MQ=255)

                                                               aTAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCAt                            >  1:3012673/1‑91 (MQ=255)

                                                                tAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATa                           <  1:2255479/91‑1 (MQ=255)

                                                                tAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATa                           <  1:2256337/91‑1 (MQ=255)

                                                                 aaCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATaa                          >  1:1932274/1‑91 (MQ=255)

                                                                 aaCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATaa                          >  1:1932366/1‑91 (MQ=255)

                                                                  aCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAAc                         >  1:1327046/1‑91 (MQ=255)

                                                                  aCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAAc                         >  1:3075308/1‑91 (MQ=255)

                                                                  aCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAAc                         >  1:3073712/1‑91 (MQ=255)

                                                                  aCTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAAc                         >  1:3073686/1‑91 (MQ=255)

                                                                     aCGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACAtt                      <  1:31307/91‑1 (MQ=255)

                                                                       ggCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTc                    >  1:1014579/1‑91 (MQ=255)

                                                                        gCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                   >  1:1193624/1‑91 (MQ=255)

                                                                        gCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                   <  1:2461372/91‑1 (MQ=255)

                                                                        gCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                   >  1:1397399/1‑91 (MQ=255)

                                                                        gCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                   <  1:575730/91‑1 (MQ=255)

                                                                        gCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCt                   <  1:670398/91‑1 (MQ=255)

                                                                          tAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTAc                 >  1:1596960/1‑91 (MQ=255)

                                                                           aGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTAcc                <  1:2134536/91‑1 (MQ=255)

                                                                            gCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCa               <  1:761119/91‑1 (MQ=255)

                                                                                tttttttATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATg           <  1:2740375/91‑1 (MQ=255)

                                                                                 ttttttATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATgg          <  1:2258932/91‑1 (MQ=255)

                                                                                    tttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTcc       <  1:13824‑M2/86‑1 (MQ=255)

                                                                                     ttatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTACAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCt      >  1:3517205‑M2/5‑91 (MQ=255)

                                                                                      tatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTa     <  1:749057‑M2/88‑1 (MQ=255)

                                                                                      tatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTa     >  1:4023548‑M2/4‑91 (MQ=255)

                                                                                      tatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTa     >  1:2474814‑M2/4‑91 (MQ=255)

                                                                                      tatGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTa     <  1:3227392‑M2/88‑1 (MQ=255)

                                                                                       atGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTaa    >  1:826149‑M2/3‑91 (MQ=255)

                                                                                       atGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTaa    >  1:873800‑M2/3‑91 (MQ=255)

                                                                                         gcgcTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAAtt  >  1:256556/1‑91 (MQ=255)

                                                                                         gcgcTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAAtt  <  1:2625338/91‑1 (MQ=255)

                                                                                         gcgcTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAAtt  <  1:2773427/91‑1 (MQ=255)

                                                                                         gcgcTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAAtt  >  1:4069218/1‑91 (MQ=255)

                                                                                         gcgcTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAAtt  >  1:236903/1‑91 (MQ=255)

GGTACAGTTGCTATTAAACCTTTAAAATAAAAGAACTGCTAGCTGAAATGTTATGAGATATTCATAACTACGGCTAGCAGTTTTTTTATGCGCTATATTGTTGTAGTTTTAGAAATGCTTGTTCAATGCGTTCGGCAGCTTTACGGCCACCCATAACATTTCTACCAAATGGTCCTAATT  >  USA300TCH1516_ALE/940790‑940969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.