| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1040357 = | 101 (1.030) | 23 (0.280) | 11/132 | NT | 23.4% | intergenic (+18/+70) | USA300TCH1516_00966/USA300TCH1516_00967 | putative ABC transporter ATP‑binding protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 1040412 = | 67 (0.830) | intergenic (+73/+15) | USA300TCH1516_00966/USA300TCH1516_00967 | putative ABC transporter ATP‑binding protein/hypothetical protein | |||||
Only 100 of 154 total aligned reads displayed.
AAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGA > USA300TCH1516_ALE/1040322‑1040502 | aaaGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTtat < 1:2854365/91‑1 (MQ=255) gccgttgttactttcataacttagtaacacagtaTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTtata > 1:1624613‑M1/35‑91 (MQ=255) aaGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTtata > 1:734976/1‑91 (MQ=255) aGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATAc > 1:1252123/1‑91 (MQ=255) gTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACt > 1:1472482/1‑91 (MQ=255) gTAGCATCTATGCGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACt > 1:3206718/1‑91 (MQ=255) aGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTCTGATTGGCTTTCATACtgt > 1:2080349/1‑91 (MQ=255) gCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtgtg > 1:1038448/1‑91 (MQ=255) gCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtgtg > 1:2693273/1‑91 (MQ=255) gCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtgtg > 1:2834035/1‑91 (MQ=255) gCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACtgtg > 1:769330/1‑91 (MQ=255) aTCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGtt > 1:2758564/1‑91 (MQ=255) aTCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGtt > 1:787839/1‑91 (MQ=255) aTCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGtt < 1:2795654/91‑1 (MQ=255) aTCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGtt > 1:787629/1‑91 (MQ=255) aTCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGtt < 1:3278535/91‑1 (MQ=255) cTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTAc > 1:3223661/1‑91 (MQ=255) cTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTAc < 1:389970/91‑1 (MQ=255) tATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACt < 1:623168/91‑1 (MQ=255) tgATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACtttca < 1:2023289/91‑5 (MQ=255) tgATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGt < 1:2869362/91‑1 (MQ=255) tgATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGt > 1:3043315/1‑91 (MQ=255) aaaaGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAg > 1:3368953/1‑91 (MQ=255) gATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaac < 1:981507/91‑1 (MQ=255) gATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTaac < 1:52554/91‑1 (MQ=255) aaaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATNAAAGTAACAACg > 1:37933/1‑91 (MQ=255) aaTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACgg > 1:901058/1‑91 (MQ=255) aTTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGc < 1:3461934/91‑1 (MQ=255) AGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTg < 1:1967113‑M1/91‑1 (MQ=255) AGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTg < 1:1742497‑M1/91‑1 (MQ=255) AGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTg < 1:1742147‑M1/91‑1 (MQ=255) AGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTg < 1:1969416‑M1/91‑1 (MQ=255) gccaatcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGa > 1:1114‑M2/51‑91 (MQ=255) gccaatcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGCTATGAAAGTAACAACGGCAAACTGa > 1:1864‑M2/51‑91 (MQ=255) GCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGa < 1:2587249‑M1/91‑1 (MQ=255) GCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGa < 1:151183‑M1/91‑1 (MQ=255) cctATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaa > 1:3582751‑M1/4‑91 (MQ=255) ccaatcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaa > 1:38097‑M2/50‑91 (MQ=255) ccaatcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACAGaa > 1:3739348‑M2/50‑91 (MQ=255) CCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaa < 1:94319‑M1/91‑1 (MQ=255) CCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaa < 1:2636755‑M1/91‑1 (MQ=255) CAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaaa < 1:1731901‑M1/91‑1 (MQ=255) atcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaaaaa > 1:2075413‑M2/47‑91 (MQ=255) atcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaaaaa > 1:14719‑M2/47‑91 (MQ=255) atcaaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaaaaa > 1:2074399‑M2/47‑91 (MQ=255) ATCAATGGGAAACGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaaaaa < 1:3179672‑M1/91‑1 (MQ=255) TCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGaaaaaa > 1:819018‑M1/1‑91 (MQ=255) aaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAg > 1:2448249‑M2/44‑91 (MQ=255) aaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAg > 1:2448264‑M2/44‑91 (MQ=255) aaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAg > 1:1627390‑M2/44‑91 (MQ=255) aaacggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAg > 1:1837127‑M2/44‑91 (MQ=255) ATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGc > 1:1475813‑M1/1‑91 (MQ=255) acggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAACGCa > 1:3265058‑M2/42‑91 (MQ=255) acggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCa > 1:2496351‑M2/42‑91 (MQ=255) gggAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCaa > 1:877955/1‑91 (MQ=255) gggAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCaa < 1:276798/91‑1 (MQ=255) ggagtgttgaagtcaacatttcccattgattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAat > 1:2031545‑M2/40‑91 (MQ=255) aaaTGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAatat < 1:3661645/91‑1 (MQ=255) aaaTGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAatat < 1:3360736/91‑1 (MQ=255) tGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataat > 1:3690133/1‑91 (MQ=255) tGTTGACCTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataat < 1:2077407/91‑1 (MQ=255) gTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataata > 1:3024037/1‑91 (MQ=255) gTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataata > 1:3907996/1‑91 (MQ=255) gACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTTAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataataata > 1:1090773/1‑91 (MQ=255) gACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataataata < 1:1050329/91‑1 (MQ=255) gACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATataataata > 1:2441278/1‑91 (MQ=255) cTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATAtt > 1:234245/1‑91 (MQ=255) cTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATAtt > 1:234142/1‑91 (MQ=255) ttCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATAttt < 1:2415210/91‑1 (MQ=255) ttCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATAttt < 1:3307272/91‑1 (MQ=255) gcAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTa < 1:1158037/90‑1 (MQ=255) acacTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCATACTGAAAAAAAGCAATATAATAATATTTAATa > 1:3524839/1‑91 (MQ=255) acacTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATa > 1:870374/1‑91 (MQ=255) cacTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATAc > 1:2449751/1‑91 (MQ=255) cacTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATAc < 1:1158713/91‑1 (MQ=255) cacTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATAc > 1:2557483/1‑91 (MQ=255) acTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACg < 1:2413142/91‑1 (MQ=255) acTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACg < 1:305895/91‑1 (MQ=255) cTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGa < 1:3311865/91‑1 (MQ=255) tCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGAt > 1:3963627/1‑91 (MQ=255) tCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGAt < 1:2453954/91‑1 (MQ=255) ccGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGAtt < 1:3715544/91‑1 (MQ=255) cGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTa < 1:218048/91‑1 (MQ=255) cGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTa < 1:4055687/91‑1 (MQ=255) cGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTa > 1:876421/1‑91 (MQ=255) gTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAg < 1:2215300/91‑1 (MQ=255) gTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAg < 1:2215724/91‑1 (MQ=255) gattggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGtaat < 1:2682488‑M2/79‑1 (MQ=255) ggcttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAAt > 1:2854151‑M2/9‑91 (MQ=255) cttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGt > 1:3962883‑M2/7‑91 (MQ=255) cttttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGt < 1:2139717‑M2/85‑1 (MQ=255) tttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTaa < 1:830245‑M2/87‑1 (MQ=255) ttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAAt < 1:2933496‑M2/88‑1 (MQ=255) ttaTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAAt < 1:1502862‑M2/88‑1 (MQ=255) aTACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTg > 1:1431474‑M2/2‑91 (MQ=255) taCTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGa < 1:1269851/91‑1 (MQ=255) taCTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGa > 1:1996644/1‑91 (MQ=255) taCTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGa < 1:582592/91‑1 (MQ=255) taCTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGa > 1:959191/1‑91 (MQ=255) taCTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGa > 1:4002925/1‑91 (MQ=255) | AAAGTAGCATCTATGTGATATCCAAAAGATAAAATTAAAAGCCAATCAATGGGAAATGTTGACTTCAACACTCCGTTTGATTGGCTTTTATACTGTGTTACTAAGTTATGAAAGTAACAACGGCAAACTGAAAAAAAGCAATATAATAATATTTAATACGATTAGTAATAAATGTAATTGA > USA300TCH1516_ALE/1040322‑1040502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |