BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 1314645	91 (0.930)	9 (0.100)	5/150	NT	9.8%	intergenic (+66/‑74)	USA300HOU_RS06490/korA	hypothetical protein/2‑oxoglutarate oxidoreductase subunit KorA
*	?	USA300TCH1516_ALE	= 1314663	80 (0.870)	9 (0.100)	5/150	NT	9.8%	intergenic (+84/‑56)	USA300HOU_RS06490/korA	hypothetical protein/2‑oxoglutarate oxidoreductase subunit KorA

Only 100 of 109 total aligned reads displayed.

ATTTTAAAATTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGTTGGCGGTCA  >  USA300TCH1516_ALE/1314573‑1314753

  tttAAAATTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGgt                                                                                          >  1:4047454‑M2/1‑89 (MQ=255)

   ttAAAATTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGgtg                                                                                         >  1:2092545‑M2/1‑88 (MQ=255)

    tAAAATTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGgtgg                                                                                        <  1:342895‑M2/91‑5 (MQ=255)

    tAAAATTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGgtgg                                                                                        >  1:3245306‑M2/1‑87 (MQ=255)

      aaaTTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGtt                                                                                      >  1:798046/1‑91 (MQ=255)

      aaaTTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGtt                                                                                      >  1:798221/1‑91 (MQ=255)

      aaaTTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGtt                                                                                      >  1:798235/1‑91 (MQ=255)

      aaaTTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGtt                                                                                      >  1:2116981/1‑91 (MQ=255)

      aaaTTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGtt                                                                                      <  1:3354430/91‑1 (MQ=255)

        aTTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCt                                                                                    <  1:3347140/91‑1 (MQ=255)

         ttACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCtt                                                                                   >  1:2148811/1‑91 (MQ=255)

         ttACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCtt                                                                                   >  1:3424980/1‑91 (MQ=255)

         ttACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCtt                                                                                   <  1:690384/91‑1 (MQ=255)

          tACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCttt                                                                                  <  1:3370870/91‑1 (MQ=255)

          tACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCttt                                                                                  >  1:1643464/1‑91 (MQ=255)

           aCGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCtttt                                                                                 >  1:935713/1‑91 (MQ=255)

            cGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCttttt                                                                                >  1:578206/1‑91 (MQ=255)

            cGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCttttt                                                                                >  1:578436/1‑91 (MQ=255)

            cGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCttttt                                                                                >  1:578453/1‑91 (MQ=255)

             gtaagtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTg                                                                               <  1:2597226/91‑1 (MQ=255)

             gtaagtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTg                                                                               >  1:1464362/1‑91 (MQ=255)

              taagtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGt                                                                              >  1:64704/1‑91 (MQ=255)

              taagtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGt                                                                              <  1:3553153/91‑1 (MQ=255)

              taagtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGt                                                                              >  1:938510/1‑91 (MQ=255)

               aagtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGtt                                                                             <  1:1530037/91‑1 (MQ=255)

                agtaaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTa                                                                            >  1:3880460/1‑91 (MQ=255)

                  taaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATc                                                                          >  1:2603559/1‑91 (MQ=255)

                  taaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATc                                                                          <  1:535865/91‑1 (MQ=255)

                  taaACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATc                                                                          <  1:1649446/91‑1 (MQ=255)

                    aaCATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCAt                                                                        <  1:1914233/91‑1 (MQ=255)

                      cATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCAttt                                                                      <  1:3571890/91‑1 (MQ=255)

                         tCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAat                                                                   >  1:682908/1‑91 (MQ=255)

                          cGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAata                                                                  <  1:2358370/91‑1 (MQ=255)

                          cGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAata                                                                  <  1:2358386/91‑1 (MQ=255)

                           gAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAatat                                                                 <  1:3627574/91‑1 (MQ=255)

                            aaTTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATg                                                                >  1:526320/1‑91 (MQ=255)

                            aaTTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATg                                                                <  1:2060221/91‑1 (MQ=255)

                             aTTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGa                                                               <  1:1348757/91‑1 (MQ=255)

                             aTTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGa                                                               <  1:1697514/91‑1 (MQ=255)

                                ggACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTCCATAGTAAATCGgtggtactatattaacttcatactgatggacg                                                            <  1:2065009‑M2/91‑33 (MQ=255)

                                ggACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGgtggttctatattaaattcatactaatggacg                                                            <  1:1775391‑M2/91‑33 (MQ=255)

                                ggACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGgtggttctatattaaattcatactaatggacg                                                            <  1:2037350‑M2/91‑33 (MQ=255)

                                 gACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAata                                                           >  1:649095/1‑91 (MQ=255)

                                  aCCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAatat                                                          >  1:2241673/1‑91 (MQ=255)

                                   cccTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAatata                                                         <  1:870281/91‑1 (MQ=255)

                                      tATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATcc                                                      <  1:2095265/91‑1 (MQ=255)

                                             cATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATaggag                                               <  1:2174349/91‑1 (MQ=255)

                                             cATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATaggag                                               >  1:4086628/1‑91 (MQ=255)

                                              aTTAGTATGAATTTAATATAGTACCTCTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATaggagg                                              <  1:3854343/91‑1 (MQ=255)

                                              aTTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATaggagg                                              <  1:1618680/91‑1 (MQ=255)

                                              aTTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATaggagg                                              <  1:1245198/91‑1 (MQ=255)

                                              aTTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATaggagg                                              <  1:3703876/91‑1 (MQ=255)

                                                tAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCa                                            >  1:1805829/1‑91 (MQ=255)

                                                tAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCa                                            <  1:3107997/91‑1 (MQ=255)

                                                tAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCa                                            <  1:2702798/91‑1 (MQ=255)

                                                tAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCa                                            <  1:91267/91‑1 (MQ=255)

                                                  gTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCata                                          >  1:893475/1‑91 (MQ=255)

                                                    aTGAATTTAATATAGTACCACTGTTTACATAGTCAATTGGTGGTTCGTTTTGTTATCATGTAATATGAAATATATCCATAGGAGGCAtata                                        >  1:3313466/1‑91 (MQ=255)

                                                    aTGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCAtata                                        >  1:3427058/1‑91 (MQ=255)

                                                    aTGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCAtata                                        >  1:2518200/1‑91 (MQ=255)

                                                     tGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATaa                                       <  1:374116/91‑1 (MQ=255)

                                                     tGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATaa                                       <  1:2245987/91‑1 (MQ=255)

                                                     tGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATaa                                       <  1:2246304/91‑1 (MQ=255)

                                                       aaTTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACt                                     <  1:2292718/91‑1 (MQ=255)

                                                        aTTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTa                                    <  1:1175784/91‑1 (MQ=255)

                                                        aTTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTa                                    >  1:1041421/1‑91 (MQ=255)

                                                         tttAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTAt                                   >  1:3877830/1‑91 (MQ=255)

                                                          ttAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATg                                  >  1:2310430/1‑91 (MQ=255)

                                                          ttAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATg                                  >  1:629689/1‑91 (MQ=255)

                                                              tataGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAAc                              >  1:3913736/1‑91 (MQ=255)

                                                              tataGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAAc                              >  1:438416/1‑91 (MQ=255)

                                                               ataGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAAcc                             <  1:678042/91‑1 (MQ=255)

                                                               ataGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAAcc                             <  1:677074/91‑1 (MQ=255)

                                                               ataGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAAcc                             <  1:308081/91‑1 (MQ=255)

                                                               ataGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAAcc                             >  1:1753317/1‑91 (MQ=255)

                                                                taGTACCACTGTTTACATAGTAAATCGgtggtactatattaaattcatactaatggacgatagggtccaattcgaatgtttacttacgtaa                            <  1:940602‑M2/91‑65 (MQ=255)

                                                                taGTACCACTGTTTACATAGTAAATCGgtggtactatattaaattcatactaatggacgatagggtccaattcgaatgtttacttacgtaa                            <  1:1756611‑M2/91‑65 (MQ=255)

                                                                 aGTACCACTGTTTACATAGTAAATCGgtggtactatattaaattcatactaatggacgatagggtccaattcgaatgtttacttacgtaat                           <  1:2736646‑M2/91‑66 (MQ=255)

                                                                 aGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACcac                           <  1:789773/91‑1 (MQ=255)

                                                                 aGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACcac                           <  1:1657480/91‑1 (MQ=255)

                                                                  gTACCACTGTTTACATAGTAAATCGgtggtactatattaaattcatactaatggacgatagggtccaattcgaatgtttacttacgtaatt                          <  1:843170‑M2/91‑67 (MQ=255)

                                                                  gTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACcaca                          <  1:2045498/91‑1 (MQ=255)

                                                                          gTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGt                  <  1:3329081/91‑1 (MQ=255)

                                                                           tttACATAGTCAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGCGGCATATACCTCTGAAACCACAATTATCGTg                 >  1:2248159/1‑91 (MQ=255)

                                                                            ttACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTgg                >  1:3947457/1‑91 (MQ=255)

                                                                              aCATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGaa              >  1:2023072/1‑91 (MQ=255)

                                                                              aCATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGaa              >  1:360671/1‑91 (MQ=255)

                                                                              aCATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGaa              >  1:2387519/1‑91 (MQ=255)

                                                                              aCATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGaa              >  1:2415212/1‑91 (MQ=255)

                                                                              aCATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGaa              >  1:2425127/1‑91 (MQ=255)

                                                                                aTAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAg            <  1:68014/91‑1 (MQ=255)

                                                                                aTAGTAAATCGGAGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAg            >  1:3182757/1‑91 (MQ=255)

                                                                                 tAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGt           <  1:466292/91‑1 (MQ=255)

                                                                                 tAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGt           <  1:466266/91‑1 (MQ=255)

                                                                                  aGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGtt          <  1:2105700/91‑1 (MQ=255)

                                                                                  aGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGtt          <  1:2368482/91‑1 (MQ=255)

                                                                                  aGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGtt          <  1:1534891/91‑1 (MQ=255)

                                                                                      aaTCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGTTGGCg      >  1:3795308/1‑91 (MQ=255)

                                                                                       aTCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGTTGGCgg     <  1:2689923/91‑1 (MQ=255)

                                                                                          ggtggtTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGTTGGCGGTca  <  1:1855832/91‑1 (MQ=255)

ATTTTAAAATTACGTAAGTAAACATTCGAATTGGACCCTATCGTCCATTAGTATGAATTTAATATAGTACCACTGTTTACATAGTAAATCGGTGGTTCTTTTTGTTATCATTTAATATGAAATATATCCATAGGAGGCATATAACTATGAAACCACAATTATCGTGGAAAGTTGGCGGTCA  >  USA300TCH1516_ALE/1314573‑1314753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.