BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 1330548	89 (0.910)	6 (0.070)	5/148	NT	7.2%	intergenic (+23/‑124)	glpD/USA300HOU_RS06555	Aerobic glycerol‑3‑phosphate dehydrogenase/Monoacylglycerol lipase
*	?	USA300TCH1516_ALE	= 1330568	72 (0.790)	6 (0.070)	5/148	NT	7.2%	intergenic (+43/‑104)	glpD/USA300HOU_RS06555	Aerobic glycerol‑3‑phosphate dehydrogenase/Monoacylglycerol lipase

Only 100 of 105 total aligned reads displayed.

ATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCGTTGTTA  >  USA300TCH1516_ALE/1330478‑1330658

tttAAAGAAGCGCAACATTGAAATAATTAACCAGCAGTTAAGGAATAATTAATTTGTACAATCATAAACTGTTGTCCTGTTTTAAGGGCAt                                                                                            <  1:2697760/90‑1 (MQ=255)

aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTATGGGCAt                                                                                            <  1:3226753/91‑1 (MQ=255)

aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCAt                                                                                            >  1:3639986/1‑91 (MQ=255)

aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCAt                                                                                            <  1:1999283/91‑1 (MQ=255)

aTTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCAt                                                                                            <  1:1997832/91‑1 (MQ=255)

 ttAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATc                                                                                           <  1:4110881‑M2/91‑2 (MQ=255)

 ttAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATc                                                                                           <  1:3661434‑M2/91‑2 (MQ=255)

 ttAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATc                                                                                           >  1:1674735‑M2/1‑90 (MQ=255)

  tAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGGTTTAAGGGCATca                                                                                          <  1:1316646‑M2/91‑3 (MQ=255)

   aaaGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcag                                                                                         <  1:30022‑M2/91‑4 (MQ=255)

    aagaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagt                                                                                        <  1:490811‑M2/91‑5 (MQ=255)

    aagaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagt                                                                                        <  1:3557081‑M2/91‑5 (MQ=255)

     agaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagtt                                                                                       <  1:2851427‑M2/91‑6 (MQ=255)

      gaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagttt                                                                                      <  1:3776674‑M2/91‑7 (MQ=255)

      gaagCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagttt                                                                                      <  1:2789207‑M2/91‑7 (MQ=255)

        agCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGttttt                                                                                    <  1:1359559/91‑1 (MQ=255)

         gcgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGtttttt                                                                                   <  1:2220897/91‑1 (MQ=255)

          cgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGttttttt                                                                                  >  1:794954/1‑91 (MQ=255)

          cgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGttttttt                                                                                  <  1:1343314/91‑1 (MQ=255)

          cgcAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGttttttt                                                                                  >  1:4085178/1‑91 (MQ=255)

            cAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTtat                                                                                <  1:3143138/91‑1 (MQ=255)

            cAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTtag                                                                                >  1:3816288/1‑90 (MQ=255)

             aaCATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTtata                                                                               <  1:3015184/91‑1 (MQ=255)

              aCATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATAc                                                                              <  1:2152814/91‑1 (MQ=255)

              aCATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATAc                                                                              <  1:1807320/91‑1 (MQ=255)

               cATGGAAATAATCAACCATCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTATAAAGGGCATCAGTTGTTTTATACg                                                                             >  1:3384810/1‑91 (MQ=255)

                aTGGAAATATTCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACga                                                                            <  1:3976033/91‑1 (MQ=255)

                aTGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACga                                                                            >  1:1986379/1‑91 (MQ=255)

                  ggAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTTAGGGCATCAGTTTTTTTATACgaga                                                                          >  1:3871363/1‑91 (MQ=255)

                  ggAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTGAGGGCATCAGTTTTTTTATACgaga                                                                          >  1:3871335/1‑91 (MQ=255)

                  ggAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACgaga                                                                          >  1:3871228/1‑91 (MQ=255)

                  ggAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACgaga                                                                          >  1:1989264/1‑91 (MQ=255)

                  ggAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACgaga                                                                          >  1:4004447/1‑91 (MQ=255)

                   gAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGATTTAAGGGCATCAGTTTTTTTATACGAGAt                                                                         >  1:462240/1‑91 (MQ=255)

                    aaaTAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATa                                                                        >  1:1711225/1‑91 (MQ=255)

                       taatCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACAt                                                                     <  1:308961/91‑1 (MQ=255)

                        aatCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACAtt                                                                    >  1:3411678/1‑91 (MQ=255)

                            aaCCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTc                                                                >  1:65957/1‑91 (MQ=255)

                             aCCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCa                                                               >  1:413896/1‑91 (MQ=255)

                             aCCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCa                                                               >  1:3114549/1‑91 (MQ=255)

                             aCCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCa                                                               >  1:2985073/1‑91 (MQ=255)

                               cagcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAAt                                                             <  1:1157557/91‑1 (MQ=255)

                                 gcagTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTg                                                           <  1:133857/91‑1 (MQ=255)

                                   agTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGaa                                                         <  1:3399887/91‑1 (MQ=255)

                                   agTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGaa                                                         <  1:2717762/91‑1 (MQ=255)

                                     ttAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAAc                                                       <  1:3711359/91‑1 (MQ=255)

                                      tAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACt                                                      >  1:1967746/1‑91 (MQ=255)

                                      tAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACt                                                      <  1:4027791/91‑1 (MQ=255)

                                         aGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCACTTGAAACTATg                                                   >  1:3760622/1‑91 (MQ=255)

                                          gAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGc                                                  <  1:1511231/91‑1 (MQ=255)

                                           aataatTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCa                                                 <  1:355056/91‑1 (MQ=255)

                                             taattaatTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATc                                               <  1:1907694/91‑1 (MQ=255)

                                                ttaattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCAca                                            >  1:1542748/1‑90 (MQ=255)

                                                ttaattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACt                                            >  1:1542690/1‑91 (MQ=255)

                                                ttaattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACt                                            >  1:2743488/1‑91 (MQ=255)

                                                  aattTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTaa                                          >  1:45790/1‑91 (MQ=255)

                                                    tttGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAAt                                        >  1:2420203/1‑91 (MQ=255)

                                                      tGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGt                                      <  1:4064543/91‑1 (MQ=255)

                                                        tACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTAt                                    <  1:335080/91‑1 (MQ=255)

                                                         aCAATCATAAACTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgt                                   <  1:3064218‑M2/91‑58 (MQ=255)

                                                         aCAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATg                                   >  1:19807/1‑91 (MQ=255)

                                                          cAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGa                                  <  1:473709/91‑1 (MQ=255)

                                                           aaTCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGat                                 <  1:1029769/91‑1 (MQ=255)

                                                            aTCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGata                                >  1:631738/1‑91 (MQ=255)

                                                             tCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataa                               <  1:530118/91‑1 (MQ=255)

                                                              cATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataat                              <  1:1575960/91‑1 (MQ=255)

                                                                tAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataa                            >  1:4091939/1‑91 (MQ=255)

                                                                 aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat                           <  1:1191554/91‑1 (MQ=255)

                                                                 aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat                           <  1:2888520/91‑1 (MQ=255)

                                                                 aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat                           <  1:638429/91‑1 (MQ=255)

                                                                 aaaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataat                           <  1:1728249/91‑1 (MQ=255)

                                                                  aaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCGATTGAAACTATGCATCACTAAATGTATGataataata                          <  1:3504103/91‑1 (MQ=255)

                                                                  aaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCGATTGAAACTATGCATCACTAAATGTATGataataata                          <  1:3504128/91‑1 (MQ=255)

                                                                  aaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataata                          >  1:1222006/1‑91 (MQ=255)

                                                                  aaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataata                          >  1:2964973/1‑91 (MQ=255)

                                                                  aaCTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataata                          <  1:4047952/91‑1 (MQ=255)

                                                                  aaCTGGTGTACTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGataataata                          >  1:2087430/1‑91 (MQ=255)

                                                                   aCTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttctt                         <  1:3383502‑M2/91‑68 (MQ=255)

                                                                    cTGGTGTCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttcttt                        <  1:287587‑M2/91‑69 (MQ=255)

                                                                    cTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATaaa                        >  1:2389446/1‑91 (MQ=255)

                                                                        tgtCCTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttctttaatt                    <  1:589911‑M2/91‑73 (MQ=255)

                                                                        tgtCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCg                    >  1:772045/1‑91 (MQ=255)

                                                                        tgtCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCg                    >  1:771877/1‑91 (MQ=255)

                                                                        tgtCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCg                    >  1:2179728/1‑91 (MQ=255)

                                                                         gtCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGa                   >  1:3696598/1‑91 (MQ=255)

                                                                         ggacTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGa                   >  1:1461807/4‑91 (MQ=255)

                                                                          tCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGaa                  <  1:1807547/91‑1 (MQ=255)

                                                                            cTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttctttaattgctt                <  1:70917‑M2/91‑77 (MQ=255)

                                                                            cTGTTTTAAGGGCATcagtttatgattgtacaaattaattattctttaactgctggttgattatttccatgttgcgcttctttaattgctt                <  1:705897‑M2/91‑77 (MQ=255)

                                                                            cTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAata                >  1:2949073/1‑91 (MQ=255)

                                                                             tGTTTTAAAGGCAACAGTTTTTTAATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAatat               <  1:3150/91‑1 (MQ=255)

                                                                                   aaGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGc         >  1:4077247/1‑91 (MQ=255)

                                                                                   aaGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGc         >  1:3982844/1‑91 (MQ=255)

                                                                                    aGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCg        <  1:3464529/91‑1 (MQ=255)

                                                                                     gggCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCga       >  1:2294286/1‑90 (MQ=255)

                                                                                      ggCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCgtt      >  1:2433697/1‑91 (MQ=255)

                                                                                      ggCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGAACCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCgat      >  1:1661327/1‑89 (MQ=255)

                                                                                       gCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGGTAATAATAAAAGCGAATATAAAAGCgttg     >  1:2114661/1‑91 (MQ=255)

                                                                                         aTCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCgttgtt   >  1:3242697/1‑91 (MQ=255)

                                                                                          tCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCGTTGtta  >  1:2726973/1‑91 (MQ=255)

ATTAAAGAAGCGCAACATGGAAATAATCAACCAGCAGTTAAAGAATAATTAATTTGTACAATCATAAACTGGTGTCCTGTTTTAAGGGCATCAGTTTTTTTATACGAGATACATTAGTCAATTGAAACTATGCATCACTAAATGTATGATAATAATAAAAGCGAATATAAAAGCGTTGTTA  >  USA300TCH1516_ALE/1330478‑1330658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.