| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1702257 = | 112 (1.140) | 17 (0.200) | 9/138 | NT | 16.5% | intergenic (‑1/+48) | comEA/tylM1 | ComE operon protein 1/dTDP‑3‑amino‑3,6‑dideoxy‑alpha‑D‑glucopyranose N,N‑dimethyltransferase |
| ? | USA300TCH1516_ALE | 1702302 = | 75 (0.880) | intergenic (‑46/+3) | comEA/tylM1 | ComE operon protein 1/dTDP‑3‑amino‑3,6‑dideoxy‑alpha‑D‑glucopyranose N,N‑dimethyltransferase | |||||
Only 100 of 148 total aligned reads displayed.
ATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGTTTAAAA > USA300TCH1516_ALE/1702214‑1702392 | ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCTACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:3591009/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:1959228/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:2186208/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:2187860/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt > 1:2306283/1‑91 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:2578598/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTCATACACGTCTGAGCGAGTGGTTTTACttt > 1:2306033/1‑91 (MQ=255) gaagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt > 1:130828‑M1/43‑91 (MQ=255) gaagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt > 1:1644517‑M1/43‑91 (MQ=255) aagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACtttt > 1:3815607‑M1/42‑91 (MQ=255) gTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtt > 1:311874/1‑91 (MQ=255) gTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtt > 1:2054489/1‑91 (MQ=255) gTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtt < 1:84249/91‑1 (MQ=255) tAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtttt < 1:940526/91‑1 (MQ=255) tAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtttt < 1:940543/91‑1 (MQ=255) aaaaaaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAttttt > 1:1788678/1‑91 (MQ=255) aaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGc < 1:273768/91‑1 (MQ=255) aaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGc < 1:2803283/91‑1 (MQ=255) aaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGc < 1:3386550/91‑1 (MQ=255) aaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGc > 1:3244913/1‑91 (MQ=255) aTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCa > 1:1417299/1‑91 (MQ=255) aTCTTTACAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAGTTTTTCGCa < 1:2082624/91‑1 (MQ=255) cTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAAt > 1:3710911/1‑91 (MQ=255) cTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAAt > 1:3411449/1‑91 (MQ=255) cTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAAt > 1:215387/1‑91 (MQ=255) ttATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGa > 1:1019583/1‑91 (MQ=255) tataGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaa > 1:2222269/1‑91 (MQ=255) ataGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaaa > 1:2664279/1‑91 (MQ=255) aGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaaaaa < 1:288960/91‑1 (MQ=255) gCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTTGCAATGAAAAAc < 1:3185625/91‑1 (MQ=255) gTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACaa < 1:2731412/91‑1 (MQ=255) gTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACaa > 1:2312860/1‑91 (MQ=255) taataaAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAAt < 1:2612321/91‑1 (MQ=255) aataaAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATc < 1:3978845/91‑1 (MQ=255) ataaAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCt > 1:138189/1‑91 (MQ=255) aaaaTTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTc > 1:4031178/1‑91 (MQ=255) aaTTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTg < 1:483873/91‑1 (MQ=255) aaagtaaaaccactcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTc > 1:130828‑M2/50‑91 (MQ=255) aCAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTc < 1:1634739/91‑1 (MQ=255) aaTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCAt < 1:3211559/91‑1 (MQ=255) aTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCAtt < 1:1787321/91‑1 (MQ=255) TAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTa > 1:1569281‑M1/1‑91 (MQ=255) aaaccactcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATg > 1:438586‑M2/44‑91 (MQ=255) aaaccactcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATg > 1:731560‑M2/44‑91 (MQ=255) aaaccacccgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATg > 1:3618421‑M2/44‑91 (MQ=255) AACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGt > 1:2486785‑M1/1‑91 (MQ=255) CCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTc < 1:2265339‑M1/91‑1 (MQ=255) CCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTATACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTc < 1:3486649‑M1/91‑1 (MQ=255) cactcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCa > 1:3388693‑M2/40‑91 (MQ=255) CACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCa < 1:772837‑M1/91‑1 (MQ=255) actcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCAt > 1:834576‑M2/39‑91 (MQ=255) ACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCAt < 1:904350‑M1/91‑1 (MQ=255) ctcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATc > 1:3148815‑M2/38‑91 (MQ=255) ctcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATc > 1:3932170‑M2/38‑91 (MQ=255) CTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATc > 1:4000476‑M1/1‑91 (MQ=255) CTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATc < 1:3894755‑M1/91‑1 (MQ=255) tcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCt > 1:1049611‑M2/37‑91 (MQ=255) tcgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCt > 1:3664767‑M2/37‑91 (MQ=255) TCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCt < 1:3905290‑M1/91‑1 (MQ=255) TCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCt < 1:1769491‑M1/91‑1 (MQ=255) cgctcagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCta > 1:494768‑M2/36‑91 (MQ=255) CCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTa < 1:663250‑M1/91‑1 (MQ=255) tcAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCtata < 1:1932833/91‑1 (MQ=255) cAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTatat > 1:233316/1‑91 (MQ=255) cagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATAtt > 1:3941413‑M2/32‑91 (MQ=255) cagacgtgtataaagttgaggagtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATAtt > 1:1857118‑M2/32‑91 (MQ=255) aaCTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATAtt < 1:1391845/91‑1 (MQ=255) aaCTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATAtt < 1:3265981/91‑1 (MQ=255) tttATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTaaa < 1:873824/91‑1 (MQ=255) ttATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTaaaa > 1:3514705/1‑91 (MQ=255) ataCACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAACACAATCTTTCTGCATCTTCATTATGTTCAGCTATATTAAAATc > 1:4151200/1‑91 (MQ=255) ataCACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATc < 1:2457079/91‑1 (MQ=255) acacGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAg < 1:2840662/91‑1 (MQ=255) cacGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGt > 1:169364/1‑91 (MQ=255) cacGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGt > 1:165301/1‑91 (MQ=255) acGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTa > 1:3087227/1‑91 (MQ=255) acGTCTGAGCGAGTGGTTTTACTTTTATGTTTTCGCAATGAAAAACAAGCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTa < 1:1186266/91‑1 (MQ=255) cGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTaa > 1:3792877/1‑91 (MQ=255) cGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTaa > 1:166397/1‑91 (MQ=255) tCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAAt < 1:1691951/91‑1 (MQ=255) cTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATg < 1:2110031/91‑1 (MQ=255) cTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATg < 1:2464208/91‑1 (MQ=255) cTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATg < 1:1448788/91‑1 (MQ=255) tGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGt > 1:237863/1‑91 (MQ=255) gAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGtt < 1:1433706/91‑1 (MQ=255) gAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGtt < 1:551859/91‑1 (MQ=255) aGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGttt < 1:2101806/91‑1 (MQ=255) aGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGttt < 1:614984/91‑1 (MQ=255) gCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTc < 1:318547/91‑1 (MQ=255) gCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTc < 1:3231106/91‑1 (MQ=255) agtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAAc < 1:2358391‑M2/81‑1 (MQ=255) agtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAAc < 1:3522143‑M2/81‑1 (MQ=255) gtggttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACa < 1:4050014‑M2/82‑1 (MQ=255) ttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGtt < 1:2889195‑M2/86‑1 (MQ=255) ttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGtt > 1:534043‑M2/6‑91 (MQ=255) ttttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGtt > 1:4107756‑M2/6‑91 (MQ=255) tttaCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGttt > 1:2658766‑M2/5‑91 (MQ=255) aCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGTTTaaa > 1:2901145‑M2/2‑91 (MQ=255) aCTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGTTTaaa < 1:2465183‑M2/90‑1 (MQ=255) cTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGTTTaaaa < 1:3035322/91‑1 (MQ=255) | ATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTATATTAAAATCAGTAAATGTTTCAACATGTTTAAAA > USA300TCH1516_ALE/1702214‑1702392 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |