| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1873582 = | 112 (1.140) | 8 (0.090) | 6/144 | NT | 8.0% | intergenic (‑258/+492) | USA300HOU_RS09300/USA300HOU_RS09305 | Putative dipeptidase/hypothetical protein |
| ? | USA300TCH1516_ALE | 1873645 = | 84 (0.950) | intergenic (‑321/+429) | USA300HOU_RS09300/USA300HOU_RS09305 | Putative dipeptidase/hypothetical protein | |||||
Only 100 of 123 total aligned reads displayed.
AATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCTTTCAA > USA300TCH1516_ALE/1873557‑1873735 | aaTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAAc > 1:982567/1‑91 (MQ=255)aaTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAAc < 1:3939177/91‑1 (MQ=255)aaTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAAc < 1:3940103/91‑1 (MQ=255)aaTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAAc < 1:155320/91‑1 (MQ=255)aaTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAAc < 1:155308/91‑1 (MQ=255) aTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACa > 1:3359844/1‑91 (MQ=255) aTTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACa < 1:2059790/91‑1 (MQ=255) ttAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCTACAt < 1:3278082/91‑1 (MQ=255) ttAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACAt > 1:939705/1‑91 (MQ=255) tAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAATTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATa < 1:3493919/91‑1 (MQ=255) tAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAGTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATa < 1:3486285/91‑1 (MQ=255) tAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATa < 1:2358912/91‑1 (MQ=255) aaCCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAg < 1:252159/91‑1 (MQ=255) ccGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGaa < 1:2112555/91‑1 (MQ=255) ccGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGaa < 1:2112497/91‑1 (MQ=255) gaacgaaAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGc > 1:2593586/1‑91 (MQ=255) cgaaAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTgg > 1:3476101/1‑91 (MQ=255) cgaaAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTgg < 1:82904/91‑1 (MQ=255) gaaAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGc > 1:2987455/1‑91 (MQ=255) aaaaTGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGcc < 1:4091483/91‑1 (MQ=255) aaaTGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCa > 1:2185659/1‑91 (MQ=255) aaaTGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCa > 1:1205130/1‑91 (MQ=255) aaTGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCaa > 1:1141106/1‑91 (MQ=255) tGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATa < 1:4062662/91‑1 (MQ=255) gcgcCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAg > 1:1405366/1‑91 (MQ=255) gcgcCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAg > 1:547506/1‑91 (MQ=255) cgcCCCGGGGCACCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGt < 1:3753274/91‑1 (MQ=255) gcCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGtt < 1:2602422/91‑1 (MQ=255) gcCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGtt > 1:862045/1‑91 (MQ=255) gcCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGtt > 1:1586578/1‑91 (MQ=255) ccccGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACACTGCAAGTTGGCGGGGCCCCAACATAGAAGTTGGCCAATAGTTa > 1:4141390/1‑91 (MQ=255) ccccGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTa > 1:2984675/1‑91 (MQ=255) cccGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAg > 1:3750533/1‑91 (MQ=255) cccGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAg > 1:1957661/1‑91 (MQ=255) cGGGGCCCCAACAGAGAGAATTTCGAAAAGAAATTCTACAGACGATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCt < 1:4152473/91‑1 (MQ=255) GGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCtt < 1:1043729‑M1/91‑1 (MQ=255) GGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCtt < 1:1718956‑M1/91‑1 (MQ=255) GGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTc < 1:1605395‑M1/91‑1 (MQ=255) gccccgccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccGACATAGAAGCTGGTCAATAGTTAGCTTTCa > 1:2653492‑M2/61‑91 (MQ=255) GCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCa > 1:3027241‑M1/1‑91 (MQ=255) CCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCaa < 1:1142283‑M1/91‑1 (MQ=255) CCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATACAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCaa < 1:3602190‑M1/91‑1 (MQ=255) cccgccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCaat > 1:3513748‑M2/59‑91 (MQ=255) cccaccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCaat > 1:1872638‑M2/59‑91 (MQ=255) cccaccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCaat > 1:1869356‑M2/59‑91 (MQ=255) ccgccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCaata > 1:972222‑M2/58‑91 (MQ=255) CCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCaata < 1:849452‑M1/91‑1 (MQ=255) CCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCaata > 1:1001255‑M1/1‑91 (MQ=255) cgccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCaataa > 1:782608‑M2/57‑91 (MQ=255) CAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCATCATAGAAGCTGGCCAATAGTTAGCTTTCaataa < 1:3683735‑M1/91‑1 (MQ=255) gccaacttgcattgtctgtagaatttcttttcgaaattctctatgttggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCaataat > 1:2648665‑M2/56‑91 (MQ=255) gagaATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCaa > 1:2749112/1‑91 (MQ=255) tttCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgg < 1:2918052/91‑1 (MQ=255) tttCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgg < 1:1231457/91‑1 (MQ=255) tttCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgg > 1:1515584/1‑91 (MQ=255) ttCGAAATGAAATTCTACAGACACTGCATGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTggg < 1:2013754/91‑1 (MQ=255) tCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgggg < 1:350870/91‑1 (MQ=255) tCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgggg < 1:351108/91‑1 (MQ=255) tCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgggg < 1:1476441/91‑1 (MQ=255) tCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTgggg < 1:4154491/91‑1 (MQ=255) cGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGt < 1:2422707/91‑1 (MQ=255) cGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGt < 1:60338/91‑1 (MQ=255) gAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTa > 1:3463044/1‑91 (MQ=255) gAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTa > 1:583321/1‑91 (MQ=255) gAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTa > 1:1032149/1‑91 (MQ=255) aaaaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTaa < 1:402888/91‑1 (MQ=255) aaaaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTaa < 1:2629837/91‑1 (MQ=255) aaaaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTaa > 1:2251898/1‑91 (MQ=255) aaaaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTaa > 1:191299/1‑91 (MQ=255) aaaaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTaa > 1:3802332/1‑91 (MQ=255) aaaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAg < 1:3318256/91‑1 (MQ=255) tcgAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAgg > 1:2482693/3‑91 (MQ=255) aaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAgg < 1:1973973/91‑1 (MQ=255) aaGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAgg < 1:1947957/91‑1 (MQ=255) aGAAATTCTACAGACAAGGCAAGTTGGCGGGGCCCCAACATAGCAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAggg < 1:2745484/91‑1 (MQ=255) aaaTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGcc < 1:1026674/91‑1 (MQ=255) aaaTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGcc < 1:2793770/91‑1 (MQ=255) aaaTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGcc < 1:2337643/91‑1 (MQ=255) aaaTTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGcc < 1:2302165/91‑1 (MQ=255) tCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCaa > 1:2473207/1‑91 (MQ=255) tCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCaa > 1:689448/1‑91 (MQ=255) cTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAac > 1:84285/1‑91 (MQ=255) cTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAac > 1:1875971/1‑91 (MQ=255) cTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGATAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAac > 1:935351/1‑91 (MQ=255) tACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAaca < 1:1030616/91‑1 (MQ=255) cAGACAATGCAAGTTGGCGGGGCCCGAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAAcaca < 1:3865905/91‑1 (MQ=255) aGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAg > 1:1464194/1‑91 (MQ=255) aaTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGc < 1:574576/91‑1 (MQ=255) aaTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGc < 1:3182479/91‑1 (MQ=255) aaGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGcc < 1:1678027/91‑1 (MQ=255) aaGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGcc < 1:1677064/91‑1 (MQ=255) aaGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGcc < 1:1676369/91‑1 (MQ=255) ggCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAg < 1:2464748/91‑1 (MQ=255) ggggccccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCa > 1:1747513‑M2/9‑91 (MQ=255) gccccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCt > 1:234125‑M2/6‑91 (MQ=255) ccccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCtt > 1:1289522‑M2/5‑91 (MQ=255) ccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCTTTc > 1:757399‑M2/3‑91 (MQ=255) ccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCTTTc > 1:758535‑M2/3‑91 (MQ=255) ccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCTTTc > 1:3260863‑M2/3‑91 (MQ=255) ccAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCTTTc < 1:393651‑M2/89‑1 (MQ=255) | AATTAACCGAACGAAAATGCGCCCCGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGACAATGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCCAATAGTTAGCTTTCAATAATGTGCAAGTTGGGGTAAGGGCCCCAACACAGAAGCTGGCCAATAGTCAGCTTTCAA > USA300TCH1516_ALE/1873557‑1873735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |