BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	= 2021642	74 (0.750)	4 (0.050)	4/134	NT	5.4%	intergenic (+201/+59)	queE_2/USA300HOU_RS10190	7‑carboxy‑7‑deazaguanine synthase/putative acyl‑CoA thioester hydrolase
*	?	USA300TCH1516_ALE	= 2021681	79 (0.960)	4 (0.050)	4/134	NT	5.4%	intergenic (+240/+20)	queE_2/USA300HOU_RS10190	7‑carboxy‑7‑deazaguanine synthase/putative acyl‑CoA thioester hydrolase

Only 100 of 119 total aligned reads displayed.

GGGTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTT  >  USA300TCH1516_ALE/2021591‑2021770

gggTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTa                                                                                           >  1:2373532/1‑91 (MQ=255)

gggTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTa                                                                                           <  1:884724/91‑1 (MQ=255)

 ggTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAa                                                                                          >  1:2607316‑M2/1‑90 (MQ=255)

 ggTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAa                                                                                          >  1:3064370‑M2/1‑90 (MQ=255)

 ggTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAa                                                                                          >  1:289510‑M2/1‑90 (MQ=255)

  gTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAac                                                                                         <  1:2812913‑M2/91‑3 (MQ=255)

  gTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAac                                                                                         >  1:2808520‑M2/1‑89 (MQ=255)

    aaaTTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaa                                                                                       >  1:2669376‑M2/1‑87 (MQ=255)

     aaTTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaat                                                                                      >  1:2018506‑M2/1‑86 (MQ=255)

     aaTTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaat                                                                                      <  1:282195‑M2/91‑6 (MQ=255)

         ttAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgt                                                                                  >  1:3076078‑M2/1‑82 (MQ=255)

         ttAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgt                                                                                  <  1:1000665‑M2/91‑10 (MQ=255)

          tAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGGTTGTAGGTAGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtc                                                                                 >  1:1503798‑M2/1‑81 (MQ=255)

           aaCTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtct                                                                                <  1:3113168‑M2/91‑12 (MQ=255)

            aCTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtctt                                                                               <  1:4150347‑M2/91‑13 (MQ=255)

               aaaaGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTtat                                                                            <  1:2661307/91‑1 (MQ=255)

               aaaaGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTtat                                                                            >  1:493547/1‑91 (MQ=255)

                aaaGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTtata                                                                           >  1:2620665/1‑91 (MQ=255)

                aaaGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTtata                                                                           >  1:398313/1‑91 (MQ=255)

                 aaGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTatat                                                                          <  1:376112/91‑1 (MQ=255)

                 aaGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTatat                                                                          <  1:376142/91‑1 (MQ=255)

                   gCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATAttt                                                                        <  1:204758/91‑1 (MQ=255)

                      tAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTa                                                                     <  1:1942174/91‑1 (MQ=255)

                      tAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTa                                                                     <  1:1153212/91‑1 (MQ=255)

                       aaaCGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAg                                                                    >  1:3073864/1‑91 (MQ=255)

                        aaCGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGt                                                                   <  1:1420955/91‑1 (MQ=255)

                         aCGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGtc                                                                  >  1:730214/1‑91 (MQ=255)

                          cGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGtct                                                                 <  1:2547651/91‑1 (MQ=255)

                           gTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGtctc                                                                <  1:243257/91‑1 (MQ=255)

                            tGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTctct                                                               <  1:2842591/91‑1 (MQ=255)

                            tGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTctct                                                               <  1:2072867/91‑1 (MQ=255)

                            tGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAACTCATCCTTAACAATCTGTCTTTATATTTTTCGTctct                                                               >  1:2215743/1‑91 (MQ=255)

                            tGCATAAGCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTctct                                                               <  1:2072777/91‑1 (MQ=255)

                                  aTCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATg                                                         >  1:1291250/1‑91 (MQ=255)

                                   tCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGt                                                        <  1:365983/91‑1 (MQ=255)

                                       aaaGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCa                                                    >  1:1557687/1‑91 (MQ=255)

                                        aaGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCAc                                                   <  1:3047159/91‑1 (MQ=255)

                                        aaGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCAc                                                   <  1:2638279/91‑1 (MQ=255)

                                        aaGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCAc                                                   <  1:989148/91‑1 (MQ=255)

                                        aaGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCAc                                                   >  1:3111188/1‑91 (MQ=255)

                                         aGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACt                                                  <  1:3632536/91‑1 (MQ=255)

                                           aCAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTg                                                <  1:321867/91‑1 (MQ=255)

                                            cAGATTATAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACATGa                                               >  1:3222268/1‑91 (MQ=255)

                                             aGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtctttttgattatgcacgtttatgcttttagttaaaa                                              <  1:3207261‑M2/91‑46 (MQ=255)

                                              gATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtctttttgattatgcacgtttatgcttttagttaaaat                                             <  1:2914350‑M2/91‑47 (MQ=255)

                                              gATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTCATATGTTGCACTTGAGc                                             >  1:3557742/1‑91 (MQ=255)

                                              gATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGc                                             >  1:1493747/1‑91 (MQ=255)

                                               aTTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCt                                            >  1:2620010/1‑91 (MQ=255)

                                                ttGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtctttttgattatgcacgtttatgcttttagttaaaattt                                           <  1:1033881‑M2/91‑49 (MQ=255)

                                                  gTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTaaa                                         <  1:999559/91‑1 (MQ=255)

                                                   tAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAacaatctgtctttttgattatgcacgtttatgcttttagttaaaatttacc                                        <  1:1321237‑M2/91‑52 (MQ=255)

                                                   tAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAat                                        >  1:2592089/1‑91 (MQ=255)

                                                    aGGTGGAATATTCGAACATAACAGTTCATTTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAata                                       >  1:3756089/1‑91 (MQ=255)

                                                    aGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAata                                       >  1:3756153/1‑91 (MQ=255)

                                                      gTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATAtt                                     <  1:3987809/91‑1 (MQ=255)

                                                        ggAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCa                                   >  1:2943588/1‑91 (MQ=255)

                                                        ggAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCa                                   >  1:2656790/1‑91 (MQ=255)

                                                        ggAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCa                                   >  1:2879383/1‑91 (MQ=255)

                                                         gAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCaa                                  <  1:1311743/91‑1 (MQ=255)

                                                         gAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCaa                                  <  1:190551/91‑1 (MQ=255)

                                                          aaTATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAt                                 <  1:1515605/91‑1 (MQ=255)

                                                          aaTATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAt                                 <  1:2043106/91‑1 (MQ=255)

                                                           atatTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAtt                                >  1:837555/1‑91 (MQ=255)

                                                            tatTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAttg                               >  1:3987724/1‑91 (MQ=255)

                                                            tatTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAttg                               >  1:1742337/1‑91 (MQ=255)

                                                             atTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAttgt                              >  1:2893615/1‑91 (MQ=255)

                                                               tCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAttgttt                            <  1:1721919/91‑1 (MQ=255)

                                                               tCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTCGAGCTAAATATTCAAttgttt                            >  1:3901130/1‑91 (MQ=255)

                                                                cGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAttgtttg                           <  1:2773807/91‑1 (MQ=255)

                                                                 gAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAAttgtttgt                          <  1:2400092/91‑1 (MQ=255)

                                                                  aaCATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATtgtttgtt                         >  1:1025485/1‑91 (MQ=255)

                                                                  aaCATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATtgtttgtt                         <  1:2407324/91‑1 (MQ=255)

                                                                   aCATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTgtttgttt                        <  1:1224743/91‑1 (MQ=255)

                                                                   aCATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTgtttgttt                        <  1:1820697/91‑1 (MQ=255)

                                                                     aTAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTAc                      <  1:3440305/91‑1 (MQ=255)

                                                                      tAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACt                     >  1:467715/1‑91 (MQ=255)

                                                                      tAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACt                     >  1:466203/1‑91 (MQ=255)

                                                                       aaCAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACtt                    <  1:2672883/91‑1 (MQ=255)

                                                                          aGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCa                 >  1:3151085/1‑91 (MQ=255)

                                                                          aGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCa                 >  1:1703391/1‑91 (MQ=255)

                                                                          aGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCa                 <  1:1509919/91‑1 (MQ=255)

                                                                          aGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCa                 >  1:2355339/1‑91 (MQ=255)

                                                                           gTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCaa                <  1:1531193/91‑1 (MQ=255)

                                                                            ttCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAAt               >  1:715752/1‑91 (MQ=255)

                                                                              cAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGc             <  1:2759472/91‑1 (MQ=255)

                                                                                aTTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGa           <  1:1729532/91‑1 (MQ=255)

                                                                                  tCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACg         <  1:3064986/91‑1 (MQ=255)

                                                                                  tCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACg         <  1:3064882/91‑1 (MQ=255)

                                                                                    aTCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTg       >  1:966410/1‑91 (MQ=255)

                                                                                    aTCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAAGATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTg       <  1:2697922/91‑1 (MQ=255)

                                                                                     tCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGc      <  1:2140759/91‑1 (MQ=255)

                                                                                     tCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGc      >  1:1398599/1‑91 (MQ=255)

                                                                                     tCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGc      <  1:3802908/91‑1 (MQ=255)

                                                                                     tCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGc      <  1:2579010/91‑1 (MQ=255)

                                                                                      ccTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCt     <  1:1122168/91‑1 (MQ=255)

                                                                                       cTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCtt    <  1:443939/91‑1 (MQ=255)

                                                                                       cTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCtt    <  1:2171917/91‑1 (MQ=255)

                                                                                       cTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCtt    <  1:3625254/91‑1 (MQ=255)

                                                                                        ttAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCttt   <  1:2638496/91‑1 (MQ=255)

                                                                                         tAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCtttt  >  1:2583833/1‑91 (MQ=255)

GGGTAAATTTTAACTAAAAGCATAAACGTGCATAATCAAAAAGACAGATTGTAGGTGGAATATTCGAACATAACAGTTCAATTCATCCTTAACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTT  >  USA300TCH1516_ALE/2021591‑2021770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.