BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	2218211 =	63 (0.640)	9 (0.120)	7/124	NT	13.5%	intergenic (+4/+55)	USA300HOU_RS11330/fabZ	hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ
*	?	USA300TCH1516_ALE	2218261 =	67 (0.880)	9 (0.120)	7/124	NT	13.5%	intergenic (+54/+5)	USA300HOU_RS11330/fabZ	hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ

Only 100 of 124 total aligned reads displayed.

AAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCT  >  USA300TCH1516_ALE/2218172‑2218350

aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tttttttt                                                                                           <  1:2928218/91‑1 (MQ=255)

aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tttttttt                                                                                           <  1:1929342/91‑1 (MQ=255)

  aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gt                                                                                        <  1:2798184/91‑1 (MQ=255)

    cAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttt                                                                                      >  1:10896/1‑91 (MQ=255)

    cAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTC‑Gttt                                                                                      <  1:2771309/91‑1 (MQ=255)

     aaaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gtttt                                                                                     <  1:784389/91‑1 (MQ=255)

      aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gtttta                                                                                    <  1:4074571/91‑1 (MQ=255)

         ttAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttattt                                                                                 <  1:2781713/91‑1 (MQ=255)

         ttAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttattt                                                                                 <  1:2781949/91‑1 (MQ=255)

           aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttatttta                                                                               >  1:3681011/1‑91 (MQ=255)

           aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑Gttttatttta                                                                               >  1:36172/1‑91 (MQ=255)

            aaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTAc                                                                              <  1:205845/91‑1 (MQ=255)

             aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACa                                                                             >  1:1111216/1‑91 (MQ=255)

             aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACa                                                                             >  1:1330652/1‑91 (MQ=255)

             aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACa                                                                             >  1:1330705/1‑91 (MQ=255)

              ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACAt                                                                            >  1:791359/1‑91 (MQ=255)

                aTGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCt                                                                          <  1:3069990/91‑1 (MQ=255)

                 tGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCtt                                                                         >  1:1923551/1‑91 (MQ=255)

                  gAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTg                                                                        <  1:2057441/91‑1 (MQ=255)

                   aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGa                                                                       <  1:1459854/91‑1 (MQ=255)

                    aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGaa                                                                      >  1:2257680/1‑91 (MQ=255)

                    aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGaa                                                                      >  1:1373546/1‑91 (MQ=255)

                     aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt                                                                     <  1:3362248/91‑1 (MQ=255)

                     aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt                                                                     <  1:184851/91‑1 (MQ=255)

                     aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt                                                                     <  1:1862662/91‑1 (MQ=255)

                     aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAAt                                                                     <  1:2111611/91‑1 (MQ=255)

                       aTTAGAAGAGTAAAGTAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATT‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTg                                                                   <  1:3741941/91‑1 (MQ=255)

                          agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaa                                                                <  1:3961534/91‑1 (MQ=255)

                          agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaa                                                                <  1:1985386/91‑1 (MQ=255)

                          agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaa                                                                <  1:1684096/91‑1 (MQ=255)

                          agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaa                                                                <  1:1684207/91‑1 (MQ=255)

                           gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAATACATTAAATCTTTCAATG‑TTTTTTTT‑GATTTATTTTACATCTTGAATAGCaaa                                                               >  1:3852769/1‑91 (MQ=255)

                           gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaaa                                                               >  1:708994/1‑91 (MQ=255)

                           gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCaaa                                                               >  1:708666/1‑91 (MQ=255)

                            aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAAt                                                              <  1:17845/91‑1 (MQ=255)

                             agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATg                                                             <  1:596532/91‑1 (MQ=255)

                             agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATg                                                             <  1:1492870/91‑1 (MQ=255)

                               agTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTa                                                           <  1:530864/91‑1 (MQ=255)

                                  aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGt                                                        <  1:193494/91‑1 (MQ=255)

                                   aaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGtt                                                       <  1:2398302/91‑1 (MQ=255)

                                    aataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTc                                                      <  1:2269921/91‑1 (MQ=255)

                                     ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTca                                                     <  1:2720458/91‑1 (MQ=255)

                                     ataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑‑‑TTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca                                                   >  1:2632481/1‑91 (MQ=255)

                                        AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTTCATCTTGAATTGCATATGTAAgttcatta                                                  <  1:2711867‑M1/91‑4 (MQ=255)

                                         AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAAc                                                 >  1:3711114‑M1/1‑91 (MQ=255)

                                          AAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt                                                >  1:3161743‑M1/1‑91 (MQ=255)

                                           aaacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt                                                >  1:664383‑M2/48‑91 (MQ=255)

                                           AACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTa                                               >  1:608279‑M1/1‑91 (MQ=255)

                                            aacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTa                                               >  1:1181478‑M2/47‑91 (MQ=255)

                                            aacattcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTa                                               >  1:3878666‑M2/47‑91 (MQ=255)

                                               TTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag                                           <  1:2333064‑M1/91‑1 (MQ=255)

                                               TTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag                                           <  1:2333751‑M1/91‑1 (MQ=255)

                                                ttcaaagatttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag                                           >  1:606301‑M2/43‑91 (MQ=255)

                                                 CAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagca                                         >  1:330543‑M1/1‑91 (MQ=255)

                                                  AAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTATTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa                                        <  1:3497599‑M1/91‑1 (MQ=255)

                                                   AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag                                       <  1:13734‑M1/91‑1 (MQ=255)

                                                   AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag                                       <  1:1570775‑M1/91‑1 (MQ=255)

                                                     GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt                                     >  1:3965371‑M1/1‑91 (MQ=255)

                                                     GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt                                     >  1:1611896‑M1/1‑91 (MQ=255)

                                                     GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt                                     >  1:3963111‑M1/1‑91 (MQ=255)

                                                      ATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTT‑‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGa                                   >  1:2774453‑M1/1‑91 (MQ=255)

                                                       aaagatttaatgtgttggcataatctttgaatgtt‑‑‑‑TTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAcc                                 >  1:1890866‑M2/36‑91 (MQ=255)

                                                        TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGa                                   <  1:561615‑M1/91‑1 (MQ=255)

                                                        TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGa                                   <  1:561424‑M1/91‑1 (MQ=255)

                                                        TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTCGAc                                  <  1:3216667‑M1/91‑1 (MQ=255)

                                                         ttaatgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc                                  >  1:3921068‑M2/34‑91 (MQ=255)

                                                         aTGCCAACATATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAcc                                 <  1:3978717/91‑1 (MQ=255)

                                                         aTGCCAACACATTAAATCTTTGAATGTTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc                                  >  1:3803491/1‑91 (MQ=255)

                                                         aTGCCAACACATTAAATCTTTGAATGTTTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc                                  >  1:573996/1‑91 (MQ=255)

                                                            atgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt                               >  1:1592793‑M2/31‑91 (MQ=255)

                                                            atgtgttggcataatctttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt                               >  1:2893846‑M2/31‑91 (MQ=255)

                                                             cAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCg                             >  1:1908373/1‑91 (MQ=255)

                                                             cAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCg                             <  1:641055/91‑1 (MQ=255)

                                                             cAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCg                             >  1:1907666/1‑91 (MQ=255)

                                                              aaCACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGa                            <  1:4118105/91‑1 (MQ=255)

                                                              aaCACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGa                            <  1:4118225/91‑1 (MQ=255)

                                                               acacATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGAc                           <  1:285746/91‑1 (MQ=255)

                                                               acacATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGAc                           <  1:288165/91‑1 (MQ=255)

                                                                 acaTTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAg                         <  1:3939825/91‑1 (MQ=255)

                                                                 acaTTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAg                         <  1:1199255/91‑1 (MQ=255)

                                                                 acaTTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTGGACCATCGACAg                         <  1:3191057/91‑1 (MQ=255)

                                                                  caTTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt                        <  1:2797339/91‑1 (MQ=255)

                                                                  caTTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt                        <  1:3335682/91‑1 (MQ=255)

                                                                  caTTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt                        <  1:3335499/91‑1 (MQ=255)

                                                                      aaaTCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCt                    <  1:887363/91‑1 (MQ=255)

                                                                      aaaTCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCt                    >  1:2987720/1‑91 (MQ=255)

                                                                            tttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGc               <  1:1005126‑M2/77‑1 (MQ=255)

                                                                            tttgaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGc               <  1:1103416‑M2/77‑1 (MQ=255)

                                                                               gaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtt            <  1:3516376‑M2/80‑1 (MQ=255)

                                                                               gaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtt            <  1:1821944‑M2/80‑1 (MQ=255)

                                                                               gaatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtt            >  1:1558737‑M2/12‑91 (MQ=255)

                                                                                aatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtta           >  1:1294850‑M2/11‑91 (MQ=255)

                                                                                aatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtta           >  1:3612360‑M2/11‑91 (MQ=255)

                                                                                aatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtta           <  1:881445‑M2/81‑1 (MQ=255)

                                                                                aatgttttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtta           <  1:881607‑M2/81‑1 (MQ=255)

                                                                                      ttttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttaccttta     <  1:3764159‑M2/87‑1 (MQ=255)

                                                                                       tttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttac    <  1:2630350‑M2/88‑1 (MQ=255)

                                                                                        ttTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacc   <  1:4067105‑M2/89‑1 (MQ=255)

                                                                                         tTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacct  <  1:2577243‑M2/90‑1 (MQ=255)

                                                                                         tTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacct  <  1:2577203‑M2/90‑1 (MQ=255)

AAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTT‑GTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCT  >  USA300TCH1516_ALE/2218172‑2218350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.