| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2573677 = | 93 (0.950) | 13 (0.150) | 8/138 | NT | 14.7% | intergenic (‑203/+91) | norB_5/opuCD | Quinolone resistance protein NorB/Carnitine transport permease protein OpuCD |
| ? | USA300TCH1516_ALE | 2573715 = | 71 (0.840) | intergenic (‑241/+53) | norB_5/opuCD | Quinolone resistance protein NorB/Carnitine transport permease protein OpuCD | |||||
Only 100 of 115 total aligned reads displayed.
ATGATAATAATTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTAGATTG > USA300TCH1516_ALE/2573625‑2573803 | tGATAATAATTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCa > 1:2799125/1‑91 (MQ=255) ataataATTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAtt < 1:605861/91‑1 (MQ=255) ataataATTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAtt < 1:1791796/91‑1 (MQ=255) taataaTTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttt < 1:2488728/91‑1 (MQ=255) taataaTTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttt < 1:3702026/91‑1 (MQ=255) taataaTTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttt < 1:3702719/91‑1 (MQ=255) taataaTTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttt < 1:3702720/91‑1 (MQ=255) aataatTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAtttt < 1:4120550/91‑1 (MQ=255) ataatTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttttt < 1:3178082/91‑1 (MQ=255) ataatTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttttt < 1:3178428/91‑1 (MQ=255) ataatTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAttttt < 1:524206/91‑1 (MQ=255) taatTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCAtttttt < 1:3414619/91‑1 (MQ=255) gaagatgtttataatttagcgatttcgtttcatgatttataaaaa‑GGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTta > 1:881925‑M1/46‑91 (MQ=255) atTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTtat > 1:4147122/1‑91 (MQ=255) atTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTtat < 1:2036166/91‑1 (MQ=255) tGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaa < 1:3242859/91‑1 (MQ=255) tGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaa > 1:2578923/1‑91 (MQ=255) tGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaa > 1:2554345/1‑91 (MQ=255) tGCTAGTTTAGTGTAAACGCATACATACACAACCTATAAGAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaa < 1:3859391/91‑1 (MQ=255) atgtttataatttagcgatttcgtttcatgatttataaaaa‑GGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaaa > 1:2694083‑M1/42‑91 (MQ=255) gcgaTTTTAGTGTAAACGCATACAAACACAGCCTATAAAAAGGCTACTCAAAGCTTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaaa < 1:873766/88‑1 (MQ=255) gCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaaa > 1:3288295/1‑91 (MQ=255) gCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaaa > 1:3830040/1‑91 (MQ=255) gCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATaaa < 1:3527967/91‑1 (MQ=255) tATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATc > 1:2892027/1‑91 (MQ=255) aGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGaaa < 1:123566/91‑1 (MQ=255) aaaCGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGaaa < 1:2782282/91‑1 (MQ=255) aCGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATc > 1:3703528/1‑91 (MQ=255) aCGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATc > 1:3703564/1‑91 (MQ=255) aTACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTa > 1:2998232/1‑91 (MQ=255) cAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAAt > 1:310409/1‑91 (MQ=255) aaaCACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAAtt < 1:2992342/91‑1 (MQ=255) aaaCACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAAtt < 1:2813478/91‑1 (MQ=255) aaaCACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCACCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAAtt > 1:3591801/1‑91 (MQ=255) aaCACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATta > 1:536636/1‑91 (MQ=255) aaCACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATta > 1:580750/1‑91 (MQ=255) aaCACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATta < 1:2539117/91‑1 (MQ=255) cacaACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATtata < 1:3077016/91‑1 (MQ=255) cacaACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATtata < 1:2411998/91‑1 (MQ=255) cacaACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATtata < 1:414993/91‑1 (MQ=255) caACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATaaa < 1:17049/91‑1 (MQ=255) caACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATaaa > 1:652916/1‑91 (MQ=255) aaCCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAAc < 1:3601113/91‑1 (MQ=255) ccTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAt > 1:2635110/1‑91 (MQ=255) taaaaaatgaggctactcaaggagctcaaataatctttgagtagcc‑‑‑TTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtcttc > 1:881925‑M2/47‑91 (MQ=255) tataAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtct < 1:3484684/91‑1 (MQ=255) tataAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtct < 1:3972664/91‑1 (MQ=255) taAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtcttc < 1:1044217/91‑1 (MQ=255) taAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtcttc < 1:276099/91‑1 (MQ=255) aaaaaGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtcttct < 1:1037989/91‑1 (MQ=255) aaaaaGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACAtcttct < 1:3648509/91‑1 (MQ=255) aaaaGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTGcta > 1:3214749/1‑91 (MQ=255) aaaGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTctac > 1:3146919/1‑91 (MQ=255) aaaGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTctac > 1:538753/1‑91 (MQ=255) aggctactcaaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTctacta > 1:418182‑M2/39‑91 (MQ=255) aggctactcaaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTctacta > 1:416923‑M2/39‑91 (MQ=255) AGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTctacta > 1:4100233‑M1/1‑91 (MQ=255) ggctactcaaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTAt > 1:1494375‑M2/38‑91 (MQ=255) TACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTAc > 1:3173765‑M1/1‑91 (MQ=255) TACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTAc > 1:2519114‑M1/1‑91 (MQ=255) actcaaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACa > 1:1189100‑M2/34‑91 (MQ=255) ACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACa < 1:1638023‑M1/91‑1 (MQ=255) TCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACata < 1:9159‑M1/91‑1 (MQ=255) caaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACatat > 1:3557084‑M2/31‑91 (MQ=255) caaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACatat > 1:1288955‑M2/31‑91 (MQ=255) caaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACatat > 1:2733037‑M2/31‑91 (MQ=255) caaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACatat > 1:2732913‑M2/31‑91 (MQ=255) aaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATAtt > 1:1464746‑M2/30‑91 (MQ=255) aaggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATAtt > 1:1625208‑M2/30‑91 (MQ=255) AAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTa > 1:2860253‑M1/1‑91 (MQ=255) AAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTa > 1:4076295‑M1/1‑91 (MQ=255) ggagctcaaataatctttgagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTaa > 1:2906850‑M2/28‑91 (MQ=255) aGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTaa > 1:3362824/1‑91 (MQ=255) gATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAAt < 1:1821531/91‑1 (MQ=255) gATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAAt < 1:1821842/91‑1 (MQ=255) gATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAAt < 1:3998041/91‑1 (MQ=255) attattTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATa < 1:3657740/91‑1 (MQ=255) attattTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAAGTATAAACATCTTCTACTATTACATATTAATa < 1:3682981/91‑1 (MQ=255) attTGAGCTGCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACtt < 1:3968717/91‑1 (MQ=255) attTGAGCTGCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACtt < 1:3968804/91‑1 (MQ=255) attTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACtt > 1:1947853/1‑91 (MQ=255) attTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACtt < 1:384408/91‑1 (MQ=255) attTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACtt > 1:912694/1‑91 (MQ=255) tttGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACttt < 1:1226634/91‑1 (MQ=255) ttGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTg > 1:216772/1‑91 (MQ=255) ttGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTg > 1:1091592/1‑91 (MQ=255) ttGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTg > 1:1569423/1‑91 (MQ=255) ttGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTg > 1:2422449/1‑91 (MQ=255) aGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCgg < 1:1781771/91‑1 (MQ=255) aGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCgg < 1:1782430/91‑1 (MQ=255) gCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGc < 1:2687219/91‑1 (MQ=255) ccTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCga > 1:3566800/1‑91 (MQ=255) cTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCgat > 1:2192315/1‑91 (MQ=255) gagtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCgatgat > 1:3454591‑M2/10‑91 (MQ=255) gtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTa < 1:1372823‑M2/84‑1 (MQ=255) gtagcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTa < 1:1410296‑M2/84‑1 (MQ=255) agcctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTAGa > 1:4048991‑M2/6‑91 (MQ=255) cctCATCTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTAGAtt > 1:3221423‑M2/4‑91 (MQ=255) ctCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTAGATTg < 1:3461289‑M2/89‑1 (MQ=255) ctCACTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTAGATTg < 1:3461473‑M2/89‑1 (MQ=255) | ATGATAATAATTGCTATTTTAGTGTAAACGCATACAAACACAACCTATAAAAAGGCTACTCAAAGATTATTTGAGCTCCTTGAGTAGCCTCATTTTTTATAAATCATGAAACGAAATCGCTAAATTATAAACATCTTCTACTATTACATATTAATACTTTGCGGCCGATGATTAGATTG > USA300TCH1516_ALE/2573625‑2573803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |