| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2580666 = | 87 (0.880) | 8 (0.090) | 4/140 | NT | 10.4% | intergenic (+301/‑307) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase |
| ? | USA300TCH1516_ALE | 2580701 = | 62 (0.720) | intergenic (+336/‑272) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase | |||||
GAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCATTTGTG > USA300TCH1516_ALE/2580611‑2580790 | gagaATTTCGACAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTa > 1:3611733/1‑91 (MQ=255)gagaATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTa < 1:1375407/91‑1 (MQ=255) agccacagctaatgtgtatttaaaaataggaatacatgagtaaaactcatgcatAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt > 1:724170‑M1/55‑91 (MQ=255) agaATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTAGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTAt > 1:3501781/1‑91 (MQ=255) gaATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTaaa < 1:3085227/91‑3 (MQ=255) gaATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTaaa < 1:3085039/91‑3 (MQ=255) aTTTCGAAAAGAACTTCTACAGGCAATGCAAGTTGGGGTGGGAGGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCa < 1:4154510/91‑1 (MQ=255) aTTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCa < 1:3190368/91‑1 (MQ=255) aTTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCa < 1:3189517/91‑1 (MQ=255) aTTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCa < 1:2232784/91‑1 (MQ=255) tttCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCAt < 1:1029132/91‑1 (MQ=255) tttCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCAt < 1:1030190/91‑1 (MQ=255) cGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAg > 1:1348429/1‑91 (MQ=255) gAAGAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCAAGAGt < 1:3272877/91‑1 (MQ=255) gAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGt < 1:3725218/91‑1 (MQ=255) gAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGt < 1:3725194/91‑1 (MQ=255) gAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGt < 1:497415/91‑1 (MQ=255) gAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGt < 1:497430/91‑1 (MQ=255) aaaGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGttt < 1:3053165/91‑1 (MQ=255) aaaGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGttt > 1:3520122/1‑91 (MQ=255) aaaGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGttt > 1:3093252/1‑91 (MQ=255) aaGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGtaaa < 1:3320704/91‑4 (MQ=255) aGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTa < 1:2553502/91‑1 (MQ=255) aaaTTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACt < 1:3122970/91‑1 (MQ=255) tACAGGCAATGCAAGTTTGGGTGGGACGACGATAAAGAAATGCTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTa < 1:3559602/91‑1 (MQ=255) cAGGCAATGCAAGTTGGGGTGGGACGACGATAGAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGATTTTTACTCATGTAtt < 1:3536382/91‑1 (MQ=255) cAGGCAATGCAAGTTGGGGTGGGACGACGATAGAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGACTTTTACTCATGTAtt < 1:3536313/91‑1 (MQ=255) cAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTAtt < 1:4005261/91‑1 (MQ=255) cAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTAtt < 1:4005370/91‑1 (MQ=255) cAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTAtt > 1:3994094/1‑91 (MQ=255) atgCAAAGGAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTc < 1:2822202/89‑1 (MQ=255) aGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTc < 1:2772878/91‑1 (MQ=40) gCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCat < 1:4082008/91‑1 (MQ=255) gCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCat < 1:4083687/91‑1 (MQ=255) aaTGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCatat < 1:838161/91‑1 (MQ=255) aTGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATAtt < 1:2682453/91‑1 (MQ=40) cAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATAttttt < 1:3249450/91‑1 (MQ=37) aGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTaa > 1:2401915/1‑91 (MQ=34) gTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAg < 1:1044356/91‑1 (MQ=34) gTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAg < 1:1795022/91‑1 (MQ=34) gTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAg > 1:3592929/1‑91 (MQ=34) gTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAg < 1:1897218/91‑1 (MQ=34) gTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAg > 1:379095/1‑91 (MQ=33) ttGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGt < 1:3903152/91‑1 (MQ=33) ttGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGt > 1:1708711/1‑91 (MQ=34) ggggTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTac > 1:908735/1‑91 (MQ=34) ggTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTacac < 1:2558083/91‑1 (MQ=34) ggTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTacac < 1:1297670/91‑1 (MQ=34) ggTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTacac < 1:1297615/91‑1 (MQ=34) ggTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTacac > 1:3418789/1‑91 (MQ=34) ggTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTacac > 1:3417820/1‑91 (MQ=34) tGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACAt < 1:157524/91‑1 (MQ=34) tGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTGCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACAt < 1:3288465/91‑1 (MQ=21) tGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTGCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACAt < 1:3288551/91‑1 (MQ=21) ggACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTa > 1:776248/1‑91 (MQ=34) ggACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTa > 1:1879227/1‑91 (MQ=34) cgacgaTAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGcc < 1:878099/91‑2 (MQ=21) cgaTAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGccaca < 1:624576/91‑5 (MQ=21) gaTAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTgg < 1:1611323/91‑1 (MQ=33) aTAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGc < 1:3305018/91‑1 (MQ=34) tAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCt < 1:1186443/91‑1 (MQ=34) ataagaaatactaatttctaaagaaaaagtatttcttATGCATGAGTTTTACTCATGTATTCCTATTTTTAAATACACATTAGCTGTGGCt > 1:724170‑M2/38‑91 (MQ=255) aaaGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTATTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTa > 1:1159362/1‑91 (MQ=18) aagaaatactaatttctatagaaaaagtattacttATGCATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGTGGCTaa > 1:2604433‑M2/36‑91 (MQ=255) aagaaatactaatttctatagaaaaagtattacttATGCATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGTGGCTaa > 1:2604518‑M2/36‑91 (MQ=255) agaaatactaatttctatagaaaaagtatttcttATGCATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGTGGCTAAt > 1:3799383‑M2/35‑91 (MQ=255) GAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATg > 1:1352842‑M1/1‑91 (MQ=255) GAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATg < 1:484243‑M1/91‑1 (MQ=255) AAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGt > 1:3945308‑M1/1‑91 (MQ=255) aatactaatttctatagaaaaagtatttcttATGCATGAGTTTTACTCATGTATTCCTATTTTTAAGTACACATTAGCTGTGGCTAATgtt > 1:1326264‑M2/32‑90 (MQ=255) ATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGtat > 1:249460‑M1/1‑91 (MQ=255) ATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGtat > 1:2130717‑M1/1‑91 (MQ=255) actaatttctatagaaaaagtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATaa > 1:1017372‑M2/29‑91 (MQ=255) ACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATaa > 1:557008‑M1/1‑91 (MQ=255) CTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAg < 1:3547120‑M1/91‑1 (MQ=255) TTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGa < 1:1601648‑M1/91‑1 (MQ=255) ttttCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGaa > 1:3431469/1‑91 (MQ=39) ttttCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGaa < 1:2940910/91‑1 (MQ=39) tttCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAAc > 1:609449/1‑91 (MQ=39) ttCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAAcc < 1:4013945/91‑1 (MQ=39) taGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTAc < 1:388262/91‑1 (MQ=39) taGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTAc < 1:3271506/91‑1 (MQ=39) atagaaaaagtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTAc > 1:3828345‑M2/19‑91 (MQ=255) atagaaaaagtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTAc > 1:458056‑M2/19‑91 (MQ=255) aGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACa > 1:3442667/1‑91 (MQ=39) aGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACa < 1:1454140/91‑1 (MQ=39) gAAGTTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACat < 1:3342382/91‑1 (MQ=255) gAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACat < 1:4102600/91‑1 (MQ=39) aaaTTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACata < 1:1174505/91‑1 (MQ=39) ttAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACataata < 1:1500225/91‑1 (MQ=39) ttAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACataata < 1:3668960/91‑1 (MQ=39) agtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATaaa > 1:1404544‑M2/11‑91 (MQ=255) agtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATaaa > 1:900109‑M2/11‑91 (MQ=255) agtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATaaa > 1:900349‑M2/11‑91 (MQ=255) gtatttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAAt < 1:1869302‑M2/82‑1 (MQ=255) tttcttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCAt > 1:2341325‑M2/7‑91 (MQ=255) cttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCATTtg < 1:1400234‑M2/88‑1 (MQ=255) cttATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCATTtg < 1:941754‑M2/88‑1 (MQ=255) tATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCATTtgtg < 1:148038‑M2/90‑1 (MQ=255) tATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCATTtgtg > 1:1757398‑M2/2‑91 (MQ=255) | GAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTTTTTCTATAGAAATTAGTATTTCTTATGCATGAGTTTTACTCATGTATTCATATTTTTAAGTACACATTAGCTGTGGCTAATGTATAAGAACCACTACATAATAAATCATTTGTG > USA300TCH1516_ALE/2580611‑2580790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |