| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2674533 = | 95 (0.970) | 14 (0.160) | 6/140 | NT | 16.2% | intergenic (‑45/+256) | glcB/ydaP | PTS system glucoside‑specific EIICBA component/Putative thiamine pyrophosphate‑containing protein YdaP |
| ? | USA300TCH1516_ALE | 2674588 = | 62 (0.720) | intergenic (‑100/+201) | glcB/ydaP | PTS system glucoside‑specific EIICBA component/Putative thiamine pyrophosphate‑containing protein YdaP | |||||
Only 100 of 114 total aligned reads displayed.
CCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTATCAT > USA300TCH1516_ALE/2674499‑2674677 | ccTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCAt > 1:3117249/1‑91 (MQ=255) cTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCAtt > 1:3652458/1‑91 (MQ=255) tATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTa > 1:877958/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:908221/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:2117426/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:2116737/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:2005559/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:1774380/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:1774196/1‑91 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 1:52189/1‑91 (MQ=255) tctcAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAcc < 1:1150454/91‑1 (MQ=255) tctcAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAcc < 1:1456172/91‑1 (MQ=255) attagatatcacttgcgtgttactggtaatgcaggcatgagcaaacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTAcc < 1:3116576‑M2/6‑1 (MQ=255) cAATTTCCGCTGCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGt < 1:3762527/91‑1 (MQ=255) aTTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTaa > 1:3958914/1‑91 (MQ=255) aTTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTaa > 1:215494/1‑91 (MQ=255) tttCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAac > 1:2787363/1‑91 (MQ=255) tttCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAac < 1:682100/91‑1 (MQ=255) ttCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAaca < 1:4007865/91‑1 (MQ=255) ttCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAaca < 1:1366530/91‑1 (MQ=255) ttCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAaca > 1:550981/1‑91 (MQ=255) cGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGc > 1:717145/1‑91 (MQ=255) gCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCa > 1:4131460/1‑91 (MQ=255) gCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCa > 1:3635142/1‑91 (MQ=255) ccATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTg < 1:3968976/91‑1 (MQ=255) cATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGa < 1:29560/91‑1 (MQ=255) aCAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCt < 1:2727230/91‑1 (MQ=255) aCAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCt < 1:1138475/91‑1 (MQ=255) aCAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCt > 1:695746/1‑91 (MQ=255) aCAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCt < 1:327595/91‑1 (MQ=255) aaaaaaaGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTaa < 1:2814749/91‑1 (MQ=255) ggtaatGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAAt < 1:3116576‑M1/85‑1 (MQ=255) aaaaaaGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAAt > 1:3229325/1‑91 (MQ=255) aGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATa < 1:2284516/91‑1 (MQ=255) aGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATa > 1:2429408/1‑91 (MQ=255) aGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATa < 1:2284306/91‑1 (MQ=255) GCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAg > 1:1513960‑M1/1‑91 (MQ=255) CAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGc < 1:3665778‑M1/91‑1 (MQ=255) AGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCt < 1:42394‑M1/91‑1 (MQ=255) GGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCta < 1:3987285‑M1/91‑1 (MQ=255) GGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCta < 1:3986979‑M1/91‑1 (MQ=255) GCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCtat < 1:3405108‑M1/91‑1 (MQ=255) ATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCtatta > 1:2710130‑M1/1‑91 (MQ=255) ATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCtatta > 1:1257104‑M1/1‑91 (MQ=255) TGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCtattat < 1:411757‑M1/91‑1 (MQ=255) TGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCtattat < 1:412015‑M1/91‑1 (MQ=255) gcaaacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACa > 1:2998638‑M2/46‑91 (MQ=255) acaaacaaGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACa > 1:186024/1‑91 (MQ=255) acaaacaaGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACa > 1:185259/1‑91 (MQ=255) caaacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACat > 1:1738949‑M2/45‑91 (MQ=255) caaacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACat > 1:876380‑M2/45‑91 (MQ=255) aaacaaccgcactatgggaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACata > 1:1160182‑M2/44‑91 (MQ=255) aaacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACata > 1:4040085‑M2/44‑91 (MQ=255) aaacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACata > 1:409910‑M2/44‑91 (MQ=255) aacaaccgcactatgagaatagtcttgtttgttcatgcctgcTTTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACatat > 1:3447396‑M2/43‑91 (MQ=255) aacaaccgcactatgagaatagtcttgtttgttcatgcctgcTTTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACatat > 1:3447608‑M2/43‑91 (MQ=255) aacaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACatat > 1:251628‑M2/43‑91 (MQ=255) acaaccgcactatgagaatagtcttgtttgttcatgcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATAtt > 1:567295‑M2/42‑91 (MQ=255) acaaGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATAtt < 1:3573078/91‑1 (MQ=255) acaaGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATAtt > 1:209792/1‑91 (MQ=255) acaaGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATAtt < 1:626343/91‑1 (MQ=255) caaGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTAATATACATAttt > 1:3767524/1‑91 (MQ=255) aGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCTGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGt < 1:3932927/91‑1 (MQ=255) aGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGt < 1:3933040/91‑1 (MQ=255) aGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGt < 1:3933129/91‑1 (MQ=255) aGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGt > 1:3388935/1‑91 (MQ=255) tATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTaaaa < 1:241974/91‑1 (MQ=255) aTTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAg > 1:3872512/1‑91 (MQ=255) aTTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAg < 1:1881769/91‑1 (MQ=255) aTTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAg < 1:4036765/91‑1 (MQ=255) ttCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGc > 1:805040/1‑91 (MQ=255) tctcATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCg > 1:3300069/1‑91 (MQ=255) ctcATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGt < 1:513261/91‑1 (MQ=255) ctcATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGt > 1:2843653/1‑91 (MQ=255) tcATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGtt < 1:3807459/91‑1 (MQ=255) tAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGGTATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTc > 1:3375768/1‑91 (MQ=255) aGTGCGGTTGTTTGCTCGTGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTca < 1:3546648/91‑1 (MQ=255) gTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTcaa < 1:1108011/91‑1 (MQ=255) gTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTcaa < 1:1650136/91‑1 (MQ=255) gTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTcaa < 1:3799073/91‑1 (MQ=255) tGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTcaac < 1:2334929/91‑1 (MQ=255) gCGGTTGTTCGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTcaaca < 1:3971248/91‑1 (MQ=255) ggTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTGTTATACATATTTGTAAAAGCGTTTTCaacaac > 1:3539505/1‑91 (MQ=255) gttgttTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATTCATATTTGTAAAAGCGTTTTCAACAACt < 1:1591872/91‑1 (MQ=255) tgttTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACttt < 1:2346963/91‑1 (MQ=255) tgttTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACttt < 1:2347176/91‑1 (MQ=255) tttGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACttttt < 1:3994550/91‑1 (MQ=255) ttGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTc > 1:1792750/1‑91 (MQ=255) ttGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTc < 1:3075722/91‑1 (MQ=255) ttGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTc > 1:1792620/1‑91 (MQ=255) tGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTca > 1:1628715/1‑91 (MQ=255) gCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTcac > 1:1561781/1‑91 (MQ=255) gCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTcac < 1:1365577/91‑1 (MQ=255) cTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTcaca > 1:2151746/1‑91 (MQ=255) gcctgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAAtttt > 1:1667443‑M2/7‑91 (MQ=255) tgcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTatc < 1:2127031‑M2/88‑1 (MQ=255) gcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTatca > 1:2946773‑M2/3‑91 (MQ=255) gcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTatca > 1:816075‑M2/3‑91 (MQ=255) gcATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTatca < 1:4128481‑M2/89‑1 (MQ=255) cATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTatcat > 1:2733481‑M2/2‑91 (MQ=255) | CCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAGCTATTATACATATTTGTAAAAGCGTTTTCAACAACTTTTTCACAATTTTATCAT > USA300TCH1516_ALE/2674499‑2674677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |