| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2787510 | 93 (0.950) | 7 (0.080) | 6/142 | NT | 8.2% | intergenic (+56/‑184) | zipA_3/manR_2 | Cell division protein ZipA/Transcriptional regulator ManR |
| ? | USA300TCH1516_ALE | = 2787537 | 74 (0.850) | intergenic (+83/‑157) | zipA_3/manR_2 | Cell division protein ZipA/Transcriptional regulator ManR | |||||
Only 100 of 124 total aligned reads displayed.
AAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATAAGCTCTCAT > USA300TCH1516_ALE/2787447‑2787626 | aaaaTTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCtt < 1:3887406/91‑1 (MQ=255)aaaaTTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCtt < 1:3052806/91‑1 (MQ=255) attacagcgaacttttatatgattttaacagagtgcgaattatgctaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTAc > 1:1236017‑M1/54‑91 (MQ=255) aaTTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTac > 1:3712807‑M2/1‑89 (MQ=255) ttaaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTAct > 1:3723841‑M1/53‑91 (MQ=255) ttAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactg < 1:3941791‑M2/91‑5 (MQ=255) taaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTActg > 1:1597821‑M1/52‑91 (MQ=255) taaagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTActg > 1:782970‑M1/52‑91 (MQ=255) aagcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTActgct > 1:1821884‑M1/50‑91 (MQ=255) aTCATTTGCCTGATACGTCCACAAGTGCCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactgctg > 1:211996‑M2/1‑84 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:3649046‑M1/48‑91 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:1032477‑M1/48‑91 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:2204245‑M1/48‑91 (MQ=255) gcgaacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGt > 1:2203271‑M1/48‑91 (MQ=255) cATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactgctgtt < 1:2577086‑M2/91‑10 (MQ=255) aTTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTc < 1:3766589/91‑1 (MQ=255) tttGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCt > 1:2942536/1‑91 (MQ=255) aacttttatatgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCt > 1:3108013‑M1/45‑91 (MQ=255) tGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCttt > 1:1132904/1‑91 (MQ=255) tGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCttt > 1:1128420/1‑91 (MQ=255) ccTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTAt > 1:3366772/1‑91 (MQ=255) cTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTAtt < 1:1531192/91‑1 (MQ=255) aaTACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTg < 1:114537/90‑1 (MQ=255) aTACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGc < 1:3881449/91‑1 (MQ=255) tACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCa < 1:353100/91‑1 (MQ=255) tACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCa < 1:1085699/91‑1 (MQ=255) atgattttaacagagtgcgaattatgcaaataaagAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCa > 1:783163‑M1/36‑91 (MQ=255) aCGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCAt < 1:611607/91‑1 (MQ=255) aCGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCAt < 1:611683/91‑1 (MQ=255) aCGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTANTTGANATATCTTACTGCTGTTCTTTATTTGCAt > 1:1094128/1‑91 (MQ=255) tCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAAt < 1:3141609/91‑1 (MQ=255) ccACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAAtt < 1:489075/91‑1 (MQ=255) cacaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTc > 1:876963/1‑91 (MQ=255) cacaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTc > 1:1777291/1‑91 (MQ=255) acaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCg > 1:3557577/1‑91 (MQ=255) acaAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCg < 1:3008633/91‑1 (MQ=255) caAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGc < 1:1100888/91‑1 (MQ=255) aaGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCa < 1:2707698/91‑1 (MQ=255) aGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCAc > 1:4026376/1‑91 (MQ=255) tACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCActc > 1:217523/1‑91 (MQ=255) aCCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCActct < 1:3634003/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg < 1:1996088/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg < 1:1142450/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg < 1:718635/91‑1 (MQ=255) ccAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTg > 1:1325837/1‑91 (MQ=255) cAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAGTATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGt < 1:3592921/91‑1 (MQ=255) cAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGt > 1:3442749/1‑91 (MQ=255) aGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGtt > 1:3538932/1‑91 (MQ=255) aGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGtt > 1:4118825/1‑91 (MQ=255) tGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTaaa < 1:2656044/91‑1 (MQ=255) tGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGCTaaa > 1:3454905/1‑91 (MQ=255) gCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTATTaaaa < 1:2937397/91‑1 (MQ=255) aaaTTCAGATAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCat < 1:3974459/91‑1 (MQ=255) aTTCAGAAAAACCGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCctat > 1:3208285/1‑91 (MQ=255) aTTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCatat < 1:2798248/91‑1 (MQ=255) aTTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCatat < 1:1407380/91‑1 (MQ=255) aGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATaaaa < 1:1487491/91‑1 (MQ=255) gAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggca < 1:1802336‑M2/91‑52 (MQ=255) gAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAg > 1:1774748/1‑91 (MQ=255) gAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAg > 1:1252985/1‑91 (MQ=255) gAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAg > 1:1252561/1‑91 (MQ=255) aaaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATGAAAGt > 1:2827729/1‑91 (MQ=255) aaaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGt < 1:2210525/91‑1 (MQ=255) aaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGtt < 1:1546643/91‑1 (MQ=255) aaaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGtt > 1:510322/1‑91 (MQ=255) aaaCAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTc > 1:2788975/1‑91 (MQ=255) CAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCt > 1:2344081‑M1/1‑91 (MQ=255) CAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCt < 1:1830485‑M1/91‑1 (MQ=255) CAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCt < 1:1831312‑M1/91‑1 (MQ=255) agcagTGAGATATTTTTCTATTTGAAATATCTTactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggcaaatgatt < 1:1165834‑M2/91‑59 (MQ=255) AGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCtt > 1:1544122‑M1/1‑91 (MQ=255) gcagTGAGATATTTTTCTATTTGAAATATCTTactgctgtttttctgagtttatgcatctggtacttgtggacgtatcaggcaaatgatta < 1:3698341‑M2/91‑60 (MQ=255) gcagTGAGATATTTTTCTATTTGAAATATCTTactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggcaaatgatta < 1:2292378‑M2/91‑60 (MQ=255) GCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCttt < 1:2131713‑M1/91‑1 (MQ=255) cagTGAGATATTTTTCTATTTGAAATATCTTactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggcaaatgattaa < 1:2801261‑M2/91‑61 (MQ=255) CAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTa > 1:809929‑M1/1‑91 (MQ=255) CAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTa > 1:3920858‑M1/1‑91 (MQ=255) CAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTa > 1:3920964‑M1/1‑91 (MQ=255) GTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAAt < 1:707027‑M1/91‑1 (MQ=255) gagaTATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGt < 1:511149/91‑1 (MQ=255) gagaTATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTGGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGt < 1:4148527/91‑1 (MQ=255) agaTATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTc < 1:4009247/91‑1 (MQ=255) gaTATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCa < 1:2385217/91‑1 (MQ=255) gaTATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCa < 1:163441/91‑1 (MQ=255) gaTATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCa < 1:458266/91‑1 (MQ=255) atatTTTTCTATTTGAAATATCTTactgctgtttttctgaatttatgcatctggtacttgtggacgtatcaggcaaatgattaatttttag < 1:1909183‑M2/91‑68 (MQ=255) atTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTg < 1:2181856/91‑1 (MQ=255) atTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTCTAATGTCATTg > 1:3768283/1‑91 (MQ=255) ttCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACgt < 1:192049/91‑1 (MQ=255) ttCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACgt < 1:1460940/91‑1 (MQ=255) tATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACgtatg < 1:2728110/91‑1 (MQ=255) tATTCGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACgtatg > 1:3276856/1‑91 (MQ=255) tttGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACgtatgta > 1:426313/1‑91 (MQ=255) tttGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACgtatgta > 1:426249/1‑91 (MQ=255) tGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGtata < 1:347820/91‑1 (MQ=255) aaTATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATAAGc < 1:3264401/91‑1 (MQ=255) tCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATTAGCtctc > 1:2820349/1‑91 (MQ=255) tCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATAAGCtctc > 1:3667227/1‑91 (MQ=255) ttACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATAAGCTCTCAt < 1:482403/91‑1 (MQ=255) ttACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATAAGCTCTCAt < 1:2323295/91‑1 (MQ=255) | AAAATTAATCATTTGCCTGATACGTCCACAAGTACCAGATGCATAAATTCAGAAAAACAGCAGTGAGATATTTTTCTATTTGAAATATCTTACTGCTGTTCTTTATTTGCATAATTCGCACTCTGTTAAAATCATATAAAAGTTCGCTTTAATGTCATTGACGTATGTATAAGCTCTCAT > USA300TCH1516_ALE/2787447‑2787626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |