BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	= 17565	310 (0.880)	16 (0.050)	10/146	NT	5.5%	coding (481/738 nt)	USA300HOU_pUSA300HOUMR0023	bacitracin ABC ATP binding cassette transporter, membrane protein
*	?	CP000731	= 17593	265 (0.830)	16 (0.050)	10/146	NT	5.5%	coding (453/738 nt)	USA300HOU_pUSA300HOUMR0023	bacitracin ABC ATP binding cassette transporter, membrane protein

Only 100 of 385 total aligned reads displayed.

TATTATGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCAAC  >  CP000731/17503‑17683

tattatGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCg                                                                                            >  1:3884443/1‑91 (MQ=255)

 attatGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGc                                                                                           <  1:1947696‑M2/91‑2 (MQ=255)

 attatGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGc                                                                                           >  1:1850198‑M2/1‑90 (MQ=255)

  ttatGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGcc                                                                                          >  1:2763608‑M2/1‑89 (MQ=255)

   tatGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGcca                                                                                         <  1:3020009‑M2/91‑4 (MQ=255)

    atGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGccaa                                                                                        <  1:469119‑M2/91‑5 (MQ=255)

    atGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGccaa                                                                                        >  1:1498713‑M2/1‑87 (MQ=255)

     attttcaagggttaagccagagtttaataattgattcattctttacatttgTTATTGGTGGAGATAATATCCATAATAACACTCCGCCAAt                                                                                       >  1:1822036‑M1/52‑91 (MQ=255)

      ggTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGccaata                                                                                      >  1:3086612‑M2/1‑85 (MQ=255)

       gTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGccaataa                                                                                     >  1:3983735‑M2/1‑84 (MQ=255)

        ttAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCGAATAAc                                                                                    <  1:3224001/91‑1 (MQ=255)

        ttAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAAc                                                                                    <  1:3808822/91‑1 (MQ=255)

        ttAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAAc                                                                                    <  1:483000/91‑1 (MQ=255)

         tAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACa                                                                                   >  1:3803053/1‑91 (MQ=255)

          aaaaCAATTGTGGGAACATAATTTTTAAAATATATCGCCAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACaa                                                                                  >  1:3508806/1‑91 (MQ=255)

           aaaCAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACaaa                                                                                 >  1:2201174/1‑91 (MQ=255)

              cAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGt                                                                              <  1:352315/91‑1 (MQ=255)

               aaTTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTa                                                                             <  1:1274396/91‑1 (MQ=255)

                aTTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAGTAACAAATGTaa                                                                            <  1:3196181/91‑1 (MQ=255)

                aTTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTaa                                                                            <  1:624158/91‑1 (MQ=255)

                aTTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTaa                                                                            >  1:4110838/1‑91 (MQ=255)

                    tgGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAgaa                                                                        >  1:342006/1‑91 (MQ=255)

                     gggAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAgaat                                                                       <  1:3467753/91‑1 (MQ=255)

                     gggAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAgaat                                                                       >  1:1907394/1‑91 (MQ=255)

                       gAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAgaatga                                                                     >  1:2706953/1‑91 (MQ=255)

                         aCATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAgaatgaat                                                                   <  1:2827999/91‑1 (MQ=255)

                         aCATAATTTTTAAAATAGATCGACAAAATAATGATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAgaatgaat                                                                   <  1:3550167/91‑1 (MQ=255)

                          cATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATc                                                                  >  1:2342454/1‑91 (MQ=255)

                           aTAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCa                                                                 <  1:450702/91‑1 (MQ=255)

                            tAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCaa                                                                >  1:2958977/1‑91 (MQ=255)

                             aaTTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAat                                                               >  1:1372864/1‑91 (MQ=255)

                             aaTTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAat                                                               >  1:3815537/1‑91 (MQ=255)

                              aTTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAatt                                                              >  1:3400079/1‑91 (MQ=255)

                              aTTTTTAAAATATATCGACAAAATAATGATTGGTGGAGATAATATCCATAATAACACTCCGCCGATAACAAATGTAAAGAATGAATCAatt                                                              <  1:495286/91‑1 (MQ=255)

                               tttttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAatta                                                             <  1:4046373/91‑1 (MQ=255)

                                ttttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAattat                                                            <  1:3692933/91‑1 (MQ=255)

                                ttttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAattat                                                            >  1:1525849/1‑91 (MQ=255)

                                 tttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAattatt                                                           >  1:3140839/1‑91 (MQ=255)

                                 tttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAattatt                                                           <  1:796871/91‑1 (MQ=255)

                                 tttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAattatt                                                           <  1:1992915/91‑1 (MQ=255)

                                  ttAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAAttatta                                                          <  1:1315516/91‑1 (MQ=255)

                                    aaaaTATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTaaa                                                        >  1:2291332/1‑91 (MQ=255)

                                      aaTATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAAct                                                      <  1:2489162/91‑1 (MQ=255)

                                        tatatCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAActct                                                    <  1:2531784/91‑1 (MQ=255)

                                         atatCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTg                                                   <  1:4133777/91‑1 (MQ=255)

                                         atatCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTg                                                   <  1:9597/91‑1 (MQ=255)

                                          tatCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTgg                                                  <  1:2427347/91‑1 (MQ=255)

                                          tatCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTgg                                                  <  1:3285254/91‑1 (MQ=255)

                                           atCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGc                                                 <  1:1228520/91‑1 (MQ=255)

                                             cGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCtt                                               <  1:2365641/91‑1 (MQ=255)

                                                cAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAAc                                            <  1:612862/91‑1 (MQ=255)

                                                 aaaaTAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAAcc                                           <  1:3120067/91‑1 (MQ=255)

                                                 aaaaTAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAAcc                                           <  1:2348428/91‑1 (MQ=255)

                                                  aaaTAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAAccc                                          <  1:377973/91‑1 (MQ=255)

                                                  aaaTAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAAccc                                          <  1:760134/91‑1 (MQ=255)

                                                  aaaTAATTATTGGTGGAGATAATATCCATAAGAACACTCCGCCAGTAACAAATGTAAGGAATGAATCAATTATTAAACTCTGGCTTAAccc                                          <  1:3312494/91‑1 (MQ=255)

                                                   aataatTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCt                                         <  1:3430222/91‑1 (MQ=255)

                                                     taatTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTg                                       <  1:848060/91‑1 (MQ=255)

                                                        ttattGGTGGAGATAATATCCATAATAACACTCCGccaataattattttgtcgatatattttaaaaattatgttcccacaattgttttaac                                    <  1:2222803‑M2/91‑57 (MQ=255)

                                                        TTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGaaa                                    <  1:169804‑M1/91‑1 (MQ=255)

                                                            TGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGc                                >  1:1893903‑M1/1‑91 (MQ=255)

                                                            TGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGc                                >  1:532292‑M1/1‑91 (MQ=255)

                                                            TGGTGGAGATAATATCCATAATAACACTCCGCAAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGc                                >  1:2557379‑M1/1‑91 (MQ=255)

                                                             GGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCa                               >  1:1639757‑M1/1‑91 (MQ=255)

                                                              gtggAGATAATATCCATAATAACACTCCGccaataattattttgtcgatatattttaaaaattatgttcccacaattgttttaaccataat                              <  1:4067116‑M2/91‑63 (MQ=255)

                                                              GTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCaa                              >  1:1247909‑M1/1‑91 (MQ=255)

                                                               tggAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAAt                             >  1:356617/1‑91 (MQ=255)

                                                                ggAGATAATATCCATAATAACACTCCGccaataattattttgtcgatatattttaaaaattatgttcccacaattgttttaaccataataa                            <  1:2057732‑M2/91‑65 (MQ=255)

                                                                 gagaTAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAg                           <  1:2094720/91‑1 (MQ=255)

                                                                  agaTAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGc                          <  1:3392636/91‑1 (MQ=255)

                                                                   gaTAATATCCATAATAACACTCCGccaataattattttgtcgatatattttaaaaattatgttcccacaattgttttaaccataataatta                         <  1:2140170‑M2/91‑68 (MQ=255)

                                                                     taataTCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATa                       <  1:965560/91‑1 (MQ=255)

                                                                     taataTCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATa                       >  1:1577842/1‑91 (MQ=255)

                                                                       atatCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATAcc                     >  1:3053144/1‑91 (MQ=255)

                                                                       atatCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATAcc                     >  1:657405/1‑91 (MQ=255)

                                                                       atatCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATAcc                     >  1:3892796/1‑91 (MQ=255)

                                                                        tatCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCt                    <  1:364305/91‑1 (MQ=255)

                                                                        tatCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCt                    <  1:1787237/91‑1 (MQ=255)

                                                                        tatCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCt                    <  1:2331875/91‑1 (MQ=255)

                                                                         atCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTa                   >  1:567244/1‑91 (MQ=255)

                                                                          tCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAg                  <  1:1076978/91‑1 (MQ=255)

                                                                           ccATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGc                 <  1:1051295/91‑1 (MQ=255)

                                                                              taataaCACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCAtt              <  1:2256928/91‑1 (MQ=255)

                                                                               aataaCACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTa             <  1:1181067/91‑1 (MQ=255)

                                                                               aataaCACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTa             <  1:2890131/91‑1 (MQ=255)

                                                                                  aaCACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGANAATGCAATNGCATACCTAGCATTAAAg          <  1:3370517/91‑1 (MQ=255)

                                                                                   acacTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGt         <  1:143414/91‑1 (MQ=255)

                                                                                     acTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTa       >  1:1331521/1‑91 (MQ=255)

                                                                                     acTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTa       <  1:660463/91‑1 (MQ=255)

                                                                                      cTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAg      >  1:301054/1‑91 (MQ=255)

                                                                                      cTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAg      <  1:3722289/91‑1 (MQ=255)

                                                                                      cTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAg      >  1:512500/1‑91 (MQ=255)

                                                                                       tCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGc     >  1:1754206/1‑91 (MQ=255)

                                                                                       tCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGc     <  1:2234756/91‑1 (MQ=255)

                                                                                        ccGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCa    >  1:2604301/1‑91 (MQ=255)

                                                                                        ccGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCa    >  1:3833960/1‑91 (MQ=255)

                                                                                        ccGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCa    >  1:2047648/1‑91 (MQ=255)

                                                                                        ccGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCa    <  1:2879936/91‑1 (MQ=255)

                                                                                          gCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCAAc  <  1:295407/91‑1 (MQ=255)

                                                                                          gCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCAAc  >  1:1400386/1‑91 (MQ=255)

TATTATGGTTAAAACAATTGTGGGAACATAATTTTTAAAATATATCGACAAAATAATTATTGGTGGAGATAATATCCATAATAACACTCCGCCAATAACAAATGTAAAGAATGAATCAATTATTAAACTCTGGCTTAACCCTTGAAAATGCAATAGCATACCTAGCATTAAAGTTAGCAAC  >  CP000731/17503‑17683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.