| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012417 | = 2937 | 5802 (0.580) | 1563 (0.170) | 53/150 | NT | 21.9% | intergenic (‑263/–) | USA300HOU_RS14900/– | hypothetical protein/– |
| ? | NC_012417 | = 2949 | 5721 (0.610) | intergenic (‑275/–) | USA300HOU_RS14900/– | hypothetical protein/– | |||||
Only 100 of 12717 total aligned reads displayed.
TTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTT > NC_012417/2859‑3039 | ggggttttttattgtcaaattttcctttcacgcacaaaaacacgtttaaacactgtaatatcaacagttacagctatatatataaaatCGa > 1:414511‑M1/89‑91 (MQ=255) tATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAg > 1:4069957‑M2/1‑90 (MQ=255) gggttttttattgtcaaattttcctttcacgcacaaaaacacgtttaaacactgtaatatcaacagttacagctatatatataaaatCGAg > 1:935885‑M1/88‑91 (MQ=255) gggttttttattgtcaaattttcctttcacgcacaaaaacacgtttaaacactgtaatatcaacagttacagctatatatataaaatCGAg < 1:1926278‑M1/4‑1 (MQ=255) ggttttttattgtcaaattttcctttcacgcacaaaaacacgtttaaacactgtaatatcaacagttacagctatatatataaaatCGAGt > 1:3603797‑M1/87‑91 (MQ=255) ggttttttattgtcaaattttcctttcacgcacaaaaacacgtttaaacactgtaatatcaacagttacagctatatatataaaatCGAGt > 1:2742233‑M1/87‑91 (MQ=255) ttCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAgtt < 1:3841191‑M2/91‑4 (MQ=255) gttttttattgtcaaattttcctttcacgcacaaaaacacgtttaaacactgtaatatcaacagttacagctatatatataaaatCGAGtt < 1:2554535‑M1/6‑1 (MQ=255) cATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAgtttc > 1:3148993‑M2/1‑86 (MQ=255) cATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAgtttc < 1:1858809‑M2/91‑6 (MQ=255) cATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAgtttc > 1:1042204‑M2/1‑86 (MQ=255) agctatatatataaaatcgagttatttctatatagtatcaagacAAGAAGAAGGAATAGGTTGTCTTTTGAAACGAGTGTGAACGAGTttc > 1:2300264‑M1/45‑91 (MQ=255) ttGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttctt < 1:395012/91‑1 (MQ=255) tGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTttcttc < 1:2192326/91‑1 (MQ=255) ggTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTtcttct < 1:2787596/91‑1 (MQ=255) gTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTcttctt < 1:388278/91‑1 (MQ=255) gTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTcttctt < 1:2933917/91‑1 (MQ=255) tttCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgt < 1:1630278/91‑1 (MQ=255) tttCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgt < 1:126329/91‑1 (MQ=255) tttCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgt > 1:739487/1‑91 (MQ=255) tCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAgtttcaaaaaacaa < 1:1000073‑M2/91‑15 (MQ=255) tCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTtcttgtct < 1:4031318/91‑1 (MQ=255) aTTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGAt < 1:2266329/91‑1 (MQ=255) tAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATAc < 1:3079425/91‑1 (MQ=255) aaTTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACT < 1:2973880‑M1/91‑1 (MQ=255) aaTTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACT < 1:1826472‑M1/91‑1 (MQ=255) aaTTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACT > 1:1195579‑M1/1‑91 (MQ=255) atttatttAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTA > 1:158774‑M1/1‑91 (MQ=255) tttatttaGGTTTAGAGGGTCATAAAAAGAAGAAGGATTAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTAT > 1:3491741‑M1/1‑91 (MQ=255) atttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATA < 1:2704837‑M1/91‑1 (MQ=255) tttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAg > 1:557662/1‑91 (MQ=255) tttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAg < 1:1964983/91‑1 (MQ=255) tttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAg < 1:858228/91‑1 (MQ=255) ttaGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGa > 1:2077120/1‑91 (MQ=255) taGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGaa > 1:2670174/1‑91 (MQ=255) aGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGaaa > 1:1224783/1‑91 (MQ=255) ggTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAAt > 1:1701915/1‑91 (MQ=255) ggTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAAt > 1:3009483/1‑91 (MQ=255) ggTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAAt < 1:699977/91‑1 (MQ=255) ggTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAAt < 1:2152135/91‑1 (MQ=255) tttAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATaa > 1:1787389/1‑91 (MQ=255) ttAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAAc < 1:3380756/91‑1 (MQ=255) tAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACt < 1:625257/91‑1 (MQ=255) tAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACt > 1:282271/1‑91 (MQ=255) tAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACt < 1:3042479/91‑1 (MQ=255) tAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACt > 1:1420251/1‑91 (MQ=255) agagGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTc < 1:263183/91‑1 (MQ=255) agagGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTc > 1:894207/1‑91 (MQ=255) gagGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCg > 1:2226347/1‑91 (MQ=255) gggTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAt > 1:782446/1‑91 (MQ=255) gTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAGCGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAttt > 1:3300256/1‑91 (MQ=255) tCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAtttt > 1:3455309/1‑91 (MQ=255) tCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAtttt > 1:968889/1‑91 (MQ=255) tCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGAtttt < 1:3686153/91‑1 (MQ=255) cATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTta < 1:322622/91‑1 (MQ=255) tAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTAta < 1:3803251‑M2/91‑3 (MQ=255) aaaaaGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTAtat > 1:1518952‑M2/1‑88 (MQ=255) aagaagaagGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacct < 1:591966‑M2/91‑50 (MQ=255) AGAAGAAGGAAGAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTtatatatat > 1:3764610‑M1/1‑91 (MQ=255) GAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCt > 1:3115340‑M1/1‑91 (MQ=255) GAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCt < 1:1556053‑M1/91‑1 (MQ=255) GAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTATTCTTGTCTTGATACTATATCGAAATAATTCGATTTTATATATATAGCt < 1:2334048‑M1/91‑1 (MQ=255) AAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTg < 1:485359‑M1/91‑1 (MQ=255) AAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTg < 1:3261057‑M1/91‑1 (MQ=255) AAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTg < 1:1157875‑M1/91‑1 (MQ=255) AGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGt > 1:44590‑M1/1‑91 (MQ=255) ggAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTA < 1:1340123‑M1/91‑1 (MQ=255) gAATAGGTTGTTTTTTGTAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAA < 1:3556855‑M1/91‑1 (MQ=255) aaTAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAAc > 1:2513879/1‑91 (MQ=255) aTAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACt > 1:2367723/1‑91 (MQ=255) tAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTg < 1:3418409/91‑1 (MQ=255) ggTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGtt < 1:1115912/91‑1 (MQ=255) ttgttTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGa < 1:4106597/91‑1 (MQ=255) tgttTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGat > 1:259545/1‑91 (MQ=255) gttTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTCata > 1:3342617/1‑91 (MQ=255) tttGAAACGTGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATAttac > 1:3725286‑M2/1‑87 (MQ=255) tGAAACGAGTGTGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaat < 1:3182846‑M2/91‑74 (MQ=255) tGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATATAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATAttacag < 1:1298651‑M2/91‑7 (MQ=255) tGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATAttacag > 1:3992055‑M2/1‑85 (MQ=255) tGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATAttacag > 1:2406619‑M2/1‑85 (MQ=255) gAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAgt > 1:2443916/1‑91 (MQ=255) gAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAgt > 1:2476139/1‑91 (MQ=255) aaaCGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAgtg > 1:1666672/1‑91 (MQ=255) cGAGTGTGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaata < 1:1486029‑M2/91‑79 (MQ=255) gAGTGTGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataa < 1:3648767‑M2/91‑80 (MQ=255) aGTGTGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataaa < 1:2897265‑M2/91‑81 (MQ=255) aGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTaa > 1:661627/1‑91 (MQ=255) aGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTaa < 1:2118478/91‑1 (MQ=255) gtgtGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataaat < 1:1382845‑M2/91‑82 (MQ=255) gtgtGAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataaaa < 1:3520733‑M2/91‑82 (MQ=255) gtgtGAACGAgtttcaaaaaacaacctattccctcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataaat < 1:2861065‑M2/91‑82 (MQ=255) gtgtGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTaga < 1:2039044/91‑3 (MQ=255) gtgtGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTaaa > 1:1740858/1‑91 (MQ=255) gtgAACGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataaataa < 1:1082459‑M2/91‑84 (MQ=255) gtgAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACg > 1:818821/1‑91 (MQ=255) gtgAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACg < 1:517313/91‑1 (MQ=255) tgAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACgt > 1:1448885/1‑91 (MQ=255) aaCGAgtttcaaaaaacaacctattccttcttctttttatgaccctctaaacctaaataaattaatgtgaaaaccaatgaataaataaaac < 1:1893332‑M2/91‑87 (MQ=255) aaCGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACgtgt < 1:3915927/91‑1 (MQ=255) CGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGttt < 1:2004548‑M1/91‑1 (MQ=255) | TTATTCATTGGTTTTCACATTAATTTATTTAGGTTTAGAGGGTCATAAAAAGAAGAAGGAATAGGTTGTTTTTTGAAACGAGTGTGAACGAGTTTCTTCTTGTCTTGATACTATATAGAAATAACTCGATTTTATATATATAGCTGTAACTGTTGATATTACAGTGTTTAAACGTGTTTTT > NC_012417/2859‑3039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |