| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 52495 = | 30 (1.280) | 62 (2.660) +T |
5/278 | 2.2 | 70.6% | intergenic (+105/‑568) | USA300HOU_RS00215/USA300HOU_RS00220 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 52988 | 22 (0.940) | intergenic (+598/‑75) | USA300HOU_RS00215/USA300HOU_RS00220 | hypothetical protein/hypothetical protein | |||||
AAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGG > USA300TCH1516_ALE/52851‑53128 | aaaTCATCGGAGTAAGCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATcgcg < 1:227473/141‑1 (MQ=17) atcGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGaaa < 1:315288/141‑1 (MQ=32) aTCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGt < 1:253548/141‑1 (MQ=38) cgTGAAATAATCAGAAGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCTGAGGAATTGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTaa < 1:99546/141‑1 (MQ=255) gTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCTCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTaaa < 1:338960/141‑1 (MQ=255) gTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTaaa < 1:206793/141‑1 (MQ=255) ataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATGGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAAt < 1:306684/141‑1 (MQ=255) ataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTtaattaat < 1:312310/141‑1 (MQ=255) taatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATg < 1:252994/141‑1 (MQ=255) aatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATAGCGTGAAATTATCAGGTGACTCGGATCATATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAGAATGGTAGACGGTTTGATTAAATTAATgg > 1:239740/1‑141 (MQ=14) gagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATAAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGAAACTTAATAGAGTAt > 1:181092/1‑141 (MQ=255) tcttagtaATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTgg < 1:346157/138‑1 (MQ=255) taATCGCGAGAACATCGCGTGAAATTATCCGAGGAATCGTTTGAAATCACCGCAGTAACCGCGCGAACAAAACAGGATATACAATATAAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAAt < 1:494326/141‑1 (MQ=255) aTCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTg < 1:178923/141‑1 (MQ=255) aaaaTCGCGTGAAATAATCTGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTTTGGTTTGGAGGAATTGCGTTGCAt < 1:319927/141‑1 (MQ=255) aTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTCATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTGGCATaga > 1:293831/1‑141 (MQ=255) tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaa > 1:482573‑M2/1‑57 (MQ=255) tCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATagag < 1:68820/141‑1 (MQ=255) gcgTGAAATAATCAGAGGAATCGTTTTAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaat > 1:458640‑M2/1‑55 (MQ=255) gTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAg > 1:173517/1‑141 (MQ=255) gAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaactcatc < 1:444759‑M2/141‑91 (MQ=255) gAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatc < 1:444744‑M2/141‑91 (MQ=255) gAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatc > 1:125674‑M2/1‑51 (MQ=255) aaaTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagagtaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaatcatcgt > 1:238538‑M2/1‑50 (MQ=255) aataatCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTaaa < 1:292242/141‑1 (MQ=255) agagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatc > 1:187964‑M2/1‑42 (MQ=255) agagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatc < 1:274133‑M2/141‑100 (MQ=255) gagGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcg > 1:68182‑M2/1‑41 (MQ=255) ccgaaTCGGTTGAAATCCTGGGAGCAATCGCGCGAAAATGacgggaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgc > 1:480671‑M2/3‑40 (MQ=255) agGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaactaatcagaggaagcgtttgaaatcatcgtagtaagcgc < 1:126561‑M2/141‑102 (MQ=255) agGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgc > 1:232567‑M2/1‑40 (MQ=255) agGAATCGTTTGAAAATATCGTAGTGATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatggc < 1:249740‑M2/141‑102 (MQ=255) ggAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcg > 1:39481‑M2/1‑39 (MQ=255) ggAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcg < 1:413060‑M2/141‑103 (MQ=255) ggAATCGTTTGAAAACATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcg > 1:442937‑M2/1‑39 (MQ=255) gcgatcgTTTGAAAACATCCTTATAATCGTGTGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcg > 1:428520‑M2/4‑39 (MQ=255) gAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatggattgaaatcagcgtagtaatcgcgg < 1:191885‑M2/141‑104 (MQ=255) aaTCGTTTGAAAACATCCTAGAAATCGCGCGAAAATCacgtgaaataatcaggaatcgtgttgtatatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcg > 1:491999‑M2/1‑37 (MQ=255) aaTCGTCTGAAATAAGTGTAGAAATGGGGCGAAAATCgcgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcg > 1:430623‑M2/1‑37 (MQ=255) tCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaa < 1:205045‑M2/141‑107 (MQ=255) cGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcccgtgaaataatccgagaaatcgtttgaaatgatcgtagtaatcgcgcggaa < 1:422440‑M2/141‑108 (MQ=255) cGTTTGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaa < 1:28956‑M2/141‑108 (MQ=255) cGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAg > 1:308106/1‑141 (MQ=255) gtgttaaatcaacGTAGTAATCGCGCGAAAATCacgggaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaa > 1:228439‑M2/6‑33 (MQ=255) tttGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaat < 1:11221‑M2/141‑110 (MQ=255) tttGAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaat > 1:468466‑M2/1‑32 (MQ=255) tttGAAATCATCGTAATAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaat > 1:16468‑M2/1‑32 (MQ=255) tttGAAACCATCGTAGTAATCGTGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaat > 1:481358‑M2/1‑32 (MQ=255) ggtgaCATCATAGTAGTAATCTCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaat > 1:39137‑M2/3‑32 (MQ=255) ttGAAAACATAGTAGCAATAGCGCGAAAATCacgtgaaacaatcagaggaaacgttttaaaacatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatc > 1:265001‑M2/1‑31 (MQ=255) gAAATCATCTTTGTAATCTCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcac > 1:221429‑M2/1‑29 (MQ=255) gAAATCATCGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatgaggggaatcggttggaatcatcgtagtaaacgcgcgaaaatcac < 1:248215‑M2/141‑113 (MQ=255) aaTCATCCTAGTAATCGCGTGAAAATCacgtgaaacaatcaacggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgt > 1:467191‑M2/1‑27 (MQ=255) tcatcGTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacggga < 1:193283‑M2/141‑117 (MQ=255) aatcgTAGTAATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaa > 1:473320‑M2/2‑24 (MQ=255) atcGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGaaa < 1:333586/141‑1 (MQ=255) gtaATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatca < 1:475752‑M2/141‑125 (MQ=255) gtaATCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatca < 1:21531‑M2/141‑125 (MQ=255) aaTCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcaga < 1:157938‑M2/141‑127 (MQ=255) aaTCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcaga > 1:315502‑M2/1‑15 (MQ=255) aaTCGCGCGAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcaga < 1:475758‑M2/141‑127 (MQ=255) gcgAAAATCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaagcgcgccaaaatcacgagaaacaatcacaggaatc < 1:318698‑M2/141‑133 (MQ=255) cgAAAATCacgtgaaataatcagaagaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcg > 1:373251‑M2/1‑8 (MQ=255) cgAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGa > 1:485854/1‑141 (MQ=255) aaaaTCcagtgaaatactcagaggcattgtttgaaatcatcgtaggaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtt > 1:140745‑M2/1‑6 (MQ=255) aaaaTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtt > 1:2709‑M2/1‑6 (MQ=255) aaaTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcccgtgaaataatcagaggaatcgttt < 1:408166‑M2/141‑137 (MQ=255) aaaTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgatataatcagaggaatcgttt > 1:299597‑M2/1‑5 (MQ=255) aaaTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatggttt < 1:387278‑M2/141‑137 (MQ=255) aaaTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgttt < 1:323551‑M2/141‑137 (MQ=255) aaaTCacataaaataaccataggaatcgcttgaaatcatcctagtaaacgcgccaaaatcacgtgaaataatcagaggaatcgtttgaacgcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgttt > 1:193552‑M2/1‑5 (MQ=255) agccacgggaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttg > 1:488081‑M2/4‑4 (MQ=255) aaTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaaacgcgcgaaaatcacgtaaaataatcagaggaatcgtgtg < 1:462331‑M2/141‑138 (MQ=255) aaTCacgggaaatatgcagaggaatcgttctaaaccttcgcagcaaccgcgccaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttg > 1:441010‑M2/1‑4 (MQ=255) aaTCacgggaaataatcagaggaagcgttttaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttg > 1:29818‑M2/1‑4 (MQ=255) aaTCacgggaaataaccagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttg > 1:73473‑M2/1‑4 (MQ=255) aTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttga > 1:474054‑M2/1‑3 (MQ=255) aTCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttga < 1:385086‑M2/141‑139 (MQ=255) tCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaattgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaa < 1:431741‑M2/141‑140 (MQ=255) tCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcttcgcagtaatcgcgcgaaaatcacgggaaataatcagaggaatcgtttgaa < 1:235928‑M2/141‑140 (MQ=255) tCacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaa < 1:332267‑M2/141‑140 (MQ=255) cacgtgaaataatcagaggcatcgtgtgaaatcatcgtagtaatagcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaa < 1:273859‑M2/141‑141 (MQ=255) cacgtgaaataatcagacgaacgctttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaaccatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaa > 1:417107‑M2/1‑1 (MQ=255) cacgtgaaagaattagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcacgtgaaataatcagagtaatcgtttgaaa > 1:258973‑M2/1‑1 (MQ=255) | AAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCGCGTGAAATACTATGGTAGACGGTTTGAGTAAATTAATGGAGTATTTTAATATTTATGGTTTGGAGGAATTGCGTTGCATAGAGAAAGTAAATATATAGAGTATAAGAAATCACGAAAAGGATTATCTAATGATATTTGG > USA300TCH1516_ALE/52851‑53128 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |