BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	24406 =	96 (0.990)	5 (0.060)	3/240	NT	5.7%	intergenic (+398/‑88)	USA300HOU_pUSA300HOUMR0029/USA300HOU_pUSA300HOUMR0030	macrolide 2'‑phosphotransferase/Sin recombinase
*	?	CP000731	24471 =	77 (0.860)	5 (0.060)	3/240	NT	5.7%	intergenic (+463/‑23)	USA300HOU_pUSA300HOUMR0029/USA300HOU_pUSA300HOUMR0030	macrolide 2'‑phosphotransferase/Sin recombinase

Only 100 of 114 total aligned reads displayed.

TGAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACAGTCGGGAAAGTCAG  >  CP000731/24331‑24611

gtctttctaaattttgatctatcgatgatactctcgcataacctataatcattcatcttcactccataataaataTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGtat                                                                                                                                              >  2:43506‑M1/76‑141 (MQ=255)

gtctttctaaattttgatctatcgatgatactctcgcataacctataatcattcatcttcactccataataaataTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGtat                                                                                                                                              >  1:129217‑M1/76‑141 (MQ=255)

 tctttctaaattttgatctatcgatgatactctcgcataacctataatcattcatcttcactccataataaataTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGtata                                                                                                                                             >  1:388131‑M1/75‑141 (MQ=255)

 gAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGtata                                                                                                                                             <  2:134772/141‑1 (MQ=255)

  aaCGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTatat                                                                                                                                            >  1:158826/1‑141 (MQ=255)

   tttctaaattttgatctatcgatgatactctcgcataacctataatcattcatcttcactccataataaataTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtatt                                                                                                                                           >  2:235800‑M1/73‑141 (MQ=255)

   tttctaaattttgatctatcgatgatactctcgcataacctataatcattcatcttcactccataataaataTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtatt                                                                                                                                           >  2:10832‑M1/73‑141 (MQ=255)

   aCGGTTCTGTTACAAAGCAAAAATCTCTATTTATTTTTCGTAAGTTTTAATTAAAGCTATGTACCCTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtatt                                                                                                                                           <  2:165139/141‑1 (MQ=255)

   aCGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtatt                                                                                                                                           >  1:165016/1‑141 (MQ=255)

   aCGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtatt                                                                                                                                           <  2:251837/141‑1 (MQ=255)

   aCGGTTCTGTTACAAAGAAAAAATCTACATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtatt                                                                                                                                           >  1:363693/1‑141 (MQ=255)

    cGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTAtattt                                                                                                                                          >  1:631569/1‑141 (MQ=255)

           gTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATgg                                                                                                                                   >  1:17295/1‑141 (MQ=255)

           gTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATgg                                                                                                                                   <  1:710800/141‑1 (MQ=255)

               cAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTg                                                                                                                               <  1:327310/141‑1 (MQ=255)

               cAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTg                                                                                                                               >  2:37641/1‑141 (MQ=255)

               cAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTg                                                                                                                               <  1:285786/141‑1 (MQ=255)

                    aaaaaaTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGat                                                                                                                          >  1:704937/1‑141 (MQ=255)

                     aaaaaTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatg                                                                                                                         >  1:479697/1‑141 (MQ=255)

                      aaaaTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatga                                                                                                                        <  2:12071/141‑1 (MQ=255)

                        aaTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatgaat                                                                                                                      >  1:728019/1‑141 (MQ=255)

                        aaTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatgaaa                                                                                                                      >  1:606145/1‑140 (MQ=255)

                         aTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatgaatg                                                                                                                     >  1:161521/1‑141 (MQ=255)

                         aTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatgaatg                                                                                                                     >  1:383380/1‑141 (MQ=255)

                         aTCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGatgaatg                                                                                                                     >  2:210770/1‑141 (MQ=255)

                             atatTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATta                                                                                                                 <  2:116949/141‑1 (MQ=255)

                             atatTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATta                                                                                                                 >  1:486745/1‑141 (MQ=255)

                              tatttattTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATtat                                                                                                                <  2:244553/141‑1 (MQ=255)

                                 ttatttTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAgg                                                                                                             <  2:74156/141‑1 (MQ=255)

                                  tatttTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGGTTATAGGt                                                                                                            <  1:193740/141‑1 (MQ=255)

                                  tatttTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGt                                                                                                            <  1:473800/141‑1 (MQ=255)

                                   atttTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTATACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGtt                                                                                                           >  1:264814/1‑141 (MQ=255)

                                     ttttAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTAt                                                                                                         >  1:125247/1‑141 (MQ=255)

                                         aGTAAGTTTTAATTATAGATATGTAGACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGAATGATTAGGGTGTATACAACTCATGATGTGAAGATGAATGATTATAGGTTATGCga                                                                                                     >  2:155147/1‑141 (MQ=255)

                                          gTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCgag                                                                                                    <  1:32544/141‑1 (MQ=255)

                                            aaGTTTTAATTATAGATATGTACACTTTGAGTACAACCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGagag                                                                                                  <  2:102450/141‑1 (MQ=255)

                                             aGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGt                                                                                                 >  1:106046/1‑141 (MQ=255)

                                             aGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGt                                                                                                 <  1:37944/141‑1 (MQ=255)

                                                tttAATTATAGATATGTACACTTTGAGTACACCCTAACCATACTAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTatc                                                                                              <  1:424236/141‑1 (MQ=255)

                                                       ataGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATa                                                                                       >  1:391026/1‑141 (MQ=255)

                                                        taGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAg                                                                                      >  1:66666/1‑141 (MQ=255)

                                                         aGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGa                                                                                     <  1:268395/141‑1 (MQ=255)

                                                         aGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGa                                                                                     <  1:783274/141‑1 (MQ=255)

                                                         aGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGa                                                                                     <  1:110195/141‑1 (MQ=255)

                                                           atatGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATc                                                                                   <  1:631011/141‑1 (MQ=255)

                                                               gTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTAATGCGAGAGTATCATCGACAGATGaaaa                                                                               >  1:288672/1‑141 (MQ=255)

                                                                    cTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAg                                                                          >  2:296160/1‑141 (MQ=255)

                                                                    cTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAg                                                                          >  1:175935/1‑141 (MQ=255)

                                                                     tttGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGa                                                                         <  1:761013/141‑1 (MQ=255)

                                                                     tttGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGa                                                                         <  1:381817/141‑1 (MQ=255)

                                                                     tttGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGa                                                                         <  1:121459/141‑1 (MQ=255)

                                                                       tGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGaaa                                                                       <  1:688796/141‑1 (MQ=255)

                                                                       aatatacaccctaatcatacgttttaattgttataatttcaacaattctttttgtatggttagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGaaa                                                                       >  2:10832‑M2/70‑141 (MQ=255)

                                                                        gAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAg                                                                      <  2:233478/141‑1 (MQ=255)

                                                                         tatacaccctaatcatacgttttaattgttataatttcaacaattctttttgtatggttagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGa                                                                     >  1:388131‑M2/68‑141 (MQ=255)

                                                                         aGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGa                                                                     >  1:715567/1‑141 (MQ=255)

                                                                         aGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTACGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGa                                                                     >  1:420885/1‑141 (MQ=255)

                                                                          atacaccctaatcatacgttttaattgttataatttcaacaattctttttgtatggttagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGAc                                                                    >  1:129217‑M2/67‑141 (MQ=255)

                                                                          atacaccctaatcatacgttttaattgttataatttcaacaattctttttgtatggttagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGAc                                                                    >  2:43506‑M2/67‑141 (MQ=255)

                                                                           TACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACa                                                                   <  2:233598‑M1/141‑1 (MQ=255)

                                                                            ACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACaa                                                                  <  1:59530‑M1/141‑1 (MQ=255)

                                                                            ACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACaa                                                                  <  1:531401‑M1/141‑1 (MQ=255)

                                                                            ACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACaa                                                                  <  2:181898‑M1/141‑1 (MQ=255)

                                                                             CACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAGAGACAAt                                                                 <  2:259499‑M1/141‑1 (MQ=255)

                                                                              ACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAAtt                                                                <  2:208564‑M1/141‑1 (MQ=255)

                                                                              ACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAAtt                                                                >  1:432380‑M1/1‑141 (MQ=255)

                                                                                CCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTgg                                                              <  1:509728‑M1/141‑1 (MQ=255)

                                                                                  TAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGAt                                                            <  1:305645‑M1/141‑1 (MQ=255)

                                                                                   AACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATa                                                           <  1:190107‑M1/141‑1 (MQ=255)

                                                                                       aTACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAAttt                                                       >  1:287779/1‑141 (MQ=255)

                                                                                       aTACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAAttt                                                       >  1:783287/1‑141 (MQ=255)

                                                                                       aTACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAAttt                                                       >  2:77873/1‑141 (MQ=255)

                                                                                        tACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTa                                                      >  2:38297/1‑141 (MQ=255)

                                                                                         aCAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTaa                                                     >  1:78211/1‑141 (MQ=255)

                                                                                         aCAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTaa                                                     >  1:67545/1‑141 (MQ=255)

                                                                                         aCAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATAGTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTaa                                                     >  1:400513/1‑141 (MQ=255)

                                                                                             aaaGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGAc                                                 >  1:443054/1‑141 (MQ=255)

                                                                                               aGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGCGAGAAGCTGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGt                                               <  1:75168/141‑1 (MQ=255)

                                                                                                  aTTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTg                                            >  1:326595/1‑141 (MQ=255)

                                                                                                   ttgttgAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTgg                                           >  1:596176/1‑141 (MQ=255)

                                                                                                    tgttgAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGgt                                          <  1:608111/141‑1 (MQ=255)

                                                                                                    tgttgAAATTATAACAATTAAAACGCATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGgt                                          >  2:80703/1‑141 (MQ=255)

                                                                                                     gttgAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGgtg                                         >  1:351887/1‑141 (MQ=255)

                                                                                                        gAAGTTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTTAAGAGGAATGATGATAGAGTATTTGGGATTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTgg                                      <  1:589048/141‑1 (MQ=255)

                                                                                                        gAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTgg                                      <  1:250081/141‑1 (MQ=255)

                                                                                                            ttATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGaa                                  >  1:632186/1‑141 (MQ=255)

                                                                                                               taACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAAt                               >  2:237423/1‑141 (MQ=255)

                                                                                                               taACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAAt                               >  1:478292/1‑141 (MQ=255)

                                                                                                                  aaaTTAAAACGTATGATTAGGGTGTATATTTTTTCTGCAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCtt                            <  2:316519/140‑1 (MQ=255)

                                                                                                                   aaTTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCttt                           <  1:490048/141‑1 (MQ=255)

                                                                                                                   aaTTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCttt                           <  1:485782/141‑1 (MQ=255)

                                                                                                                       aaaaCGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACag                       >  1:101804/1‑141 (MQ=255)

                                                                                                                        aaaCGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACaga                      <  1:68901/141‑1 (MQ=255)

                                                                                                                             tATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAAc                 >  2:132977/1‑141 (MQ=255)

                                                                                                                              aTGATTGGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACa                >  1:525299/1‑141 (MQ=255)

                                                                                                                              aTGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACa                <  1:529630/141‑1 (MQ=255)

                                                                                                                                   tagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACAGTCgg           >  1:269020‑M2/10‑141 (MQ=255)

                                                                                                                                   tagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACAGTCgg           <  1:134472‑M2/132‑1 (MQ=255)

                                                                                                                                   tagggtgtaTATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCAATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACAGTCgg           >  2:253410‑M2/10‑141 (MQ=255)

                                                                                                                                            tatttattATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACAGTCGGGAAAGTCAg  <  1:221228/141‑1 (MQ=255)

TGAACGGTTCTGTTACAAAGAAAAAATCTATATTTATTTTTAGTAAGTTTTAATTATAGATATGTACACTTTGAGTACACCCTAACCATACAAAAAGAATTGTTGAAATTATAACAATTAAAACGTATGATTAGGGTGTATATTTATTATGGAGTGAAGATGAATGATTATAGGTTATGCGAGAGTATCATCGATAGATCAAAATTTAGAAAGACAATTGGATAATTTAAAGACGTTTGGTGTGGAGAAAATCTTTACAGAGAAACAGTCGGGAAAGTCAG  >  CP000731/24331‑24611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.