| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2580557 = | 168 (0.820) | 85 (0.450) | 13/148 | NT | 37.1% | intergenic (+192/‑416) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase |
| ? | USA300TCH1516_ALE | 2580587 = | 133 (0.710) | intergenic (+222/‑386) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase | |||||
Only 100 of 106 total aligned reads displayed.
CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2580652‑2580557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcgATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTT > USA300TCH1516_ALE/2580587‑2580676 CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCAT > 1:477423/1‑91CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCAT > 1:78956/1‑91CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCAT < 1:2607321/91‑1 CCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATT > 2:2736513/1‑91 CCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATT > 1:97476/1‑91 CCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTT > 2:1260969/1‑91 CAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGTGGCCCCTGAATAGAAAAAAAAAAAGCTTGTTACAAGCGCATTTT < 2:2827866/91‑1 CAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTT < 1:3416846/91‑1 AACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTC > 1:873147/1‑91 ACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG < 1:2826315/91‑1 ACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG < 2:3839320/91‑1 ACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG < 1:2348714/91‑1 ACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG > 2:3263106/1‑91 ACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG > 2:1284250/1‑91 TCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAAAACAGAGAATTTCGA > 1:3173423/1‑91 ACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAAT > 1:3210105/1‑91 ACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAAT > 1:1383445/1‑91 ACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAAT > 1:2761489/1‑91 GAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAA > 1:1799191/1‑91 GAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAA > 1:1799123/1‑91 aattGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACATAGAGAATTTCGCAAAGAAATTCTACAGGCAATGCGAG > 2:77812/5‑91 AATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 1:848217/1‑91 AATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 1:848105/1‑91 AATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 1:1629282/1‑91 AATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 2:604876/1‑91 AATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 2:1353287/1‑91 attGAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAA > 1:2041122/4‑91 attGAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAA > 1:2040302/4‑91 ttGAAAAAAGCTTGTTACAAGCGCATTTTCAGTTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 2:3026584/3‑91 TCGAAAAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAG > 1:694409/1‑91 TCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTT > 1:892720/1‑91 TCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTT > 1:894253/1‑91 TCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTT > 1:894895/1‑91 tGAAAAAAGCTTATTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGT > 1:3942026/2‑91 CGAAAAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATCTCGAAAAGAAATTCTACAGGCAATGCAAGT > 2:3388780/1‑91 GAAAAAAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTT > 1:540627/1‑91 GAAAAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCCACACAGAGAATTTCGAAAAGAAATTCTACCGGCAATGCAAGTT > 1:3958248/1‑91 GAAAAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTT > 1:1322901/1‑91 GAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTT > 1:573090/1‑91 GAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTT > 1:572954/1‑91 GAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTT > 1:3210271/1‑91 GAAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTT > 1:2733362/1‑91 AAAAAAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTG > 1:3511022/1‑91 AAAAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTG > 1:2419478/1‑91 AAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTG > 1:1229709/1‑91 AAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTG > 1:2050275/1‑91 AAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTG > 1:695733/1‑91 AAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTG > 1:787134/1‑91 AAAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTG > 1:2330912/1‑91 AAAAAAGCTTATTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGACATTCTACAGGCACTGCGAGTTG > 2:2274979/1‑91 AAAAAGCTTGTTACAAGCGCATTTTCG‑TTC‑AGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGAGAGTTGGGG > 1:3780955/1‑91 AAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGG > 1:2922285/1‑91 AAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGCGAATTTCGAAAAGAAATTCTACAGGCAATGCGCGTTGG > 1:3328466/1‑91 AAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGG > 1:1698307/1‑91 AAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGG > 1:3770262/1‑91 AAAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGG > 1:3219562/1‑91 AAAAAGCTTATTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGG > 2:1519741/1‑91 AAAAAGCTTATTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGG > 1:3088330/1‑91 AAAAAGCTTATTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGG > 2:1519702/1‑91 AAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGG > 2:1693814/1‑91 AAAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGG > 1:1568935/1‑91 AAAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGG > 1:292460/1‑91 AAAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 2:1821432/1‑91 AAAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:642629/1‑91 AAAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:2669439/1‑91 AAAGCTTGTTGCAAGCGCACTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 2:3461564/1‑91 AAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGG > 1:477159/1‑91 AAAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGCTGGGG > 2:970521/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCCACACAGAGAATTTCGAAAAGAAATTCTACCGGCAATGCAAGTTGGGG > 2:1495467/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:1399632/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:2161197/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 2:2865721/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:2649963/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 2:2253492/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:2650069/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGG > 1:2650082/1‑91 AAAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGG > 2:986688/1‑91 AAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGT > 1:1886878/1‑91 AAGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGT > 1:876611/1‑91 AAGCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGT > 1:2522516/1‑91 AAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGT > 1:3202210/1‑91 AAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGT > 1:334705/1‑91 AAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGGTGGGGT > 1:1575469/1‑91 AAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGa > 2:2955184/1‑90 AAGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGa > 1:2116351/1‑90 AGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGACAAGAAATTCTACAGGCAATGCGAGTGGGGGTG > 2:1575635/1‑91 AGCTTGTTGCAAGCGCATTTTCAACTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG > 2:1314300/1‑91 AGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG > 1:2977506/1‑91 AGCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGat > 2:2739820/1‑89 GCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGG > 1:2397358/1‑91 GCTTGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGG > 1:2008631/1‑91 GCTTGTTACAAGCGCATTTTCAATTCTAGTCAGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGt > 1:3307100/1‑90 TGTTACAAGCGCATTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGAC > 2:2183162/1‑91 TTTTCTATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAA > 2:3792072/1‑91 TCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATAC < 2:361316/91‑1 TCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATAC > 1:3573049/1‑91 CGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACT > 2:2429143/1‑91 CGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACT > 2:946734/1‑91 GATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTT > 1:2608851/1‑91 GATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTT > 2:848411/1‑91 CCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATCGAAAAAAGCTTGTTACAAGCGCATTTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < USA300TCH1516_ALE/2580652‑2580557‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcgATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGGGACGACGATAAAGAAATACTT > USA300TCH1516_ALE/2580587‑2580676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |