| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2580557 = | 168 (0.820) | 85 (0.450) | 13/148 | NT | 37.1% | intergenic (+192/‑416) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase |
| ? | USA300TCH1516_ALE | 2580587 = | 133 (0.710) | intergenic (+222/‑386) | yveA/pnbA | Aspartate‑proton symporter/Para‑nitrobenzyl esterase | |||||
Only 100 of 283 total aligned reads displayed.
AAATAACTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGT > USA300TCH1516_ALE/2580467‑2580647 | aagtatttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatc > 2:848411‑M1/91‑91 (MQ=255) ataaCTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGa < 2:2406331/91‑1 (MQ=255) taactaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaa > 1:315313/1‑91 (MQ=255) taactaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaa < 2:3595753/91‑1 (MQ=255) taactaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaa < 1:2311641/91‑1 (MQ=255) tttctttatcgtcgtcccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatAGaaaa > 2:3792072‑M1/86‑91 (MQ=255) actaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaaa < 1:3098093/91‑1 (MQ=255) actaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaaa < 2:1865341/91‑1 (MQ=255) actaacATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGaaaa > 2:2290940/1‑91 (MQ=255) ctaacATAACAAGATGATGATCAGGCTTGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAAt < 1:1151513/91‑1 (MQ=255) taacataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATg > 1:2848457/1‑91 (MQ=255) taacataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATg < 2:64676/91‑1 (MQ=255) aacataactAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTAGATTGGCAGTAGTTGACTGAACGAAAATgc < 2:3434673/91‑1 (MQ=255) acataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATgcg > 2:2487630/1‑91 (MQ=255) ataacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCt < 2:3529696/91‑1 (MQ=255) aacaAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTg < 1:800966/91‑1 (MQ=255) gatgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACa < 1:3791323/91‑1 (MQ=40) atgatgatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACaa < 1:3441455/91‑1 (MQ=39) tgatgatCAGGCTGGGACATAAATGAATGTTCTATGCTCTACGTAGTTATATTGACAGTAGTTGACTGAACGAAAATGCGCTTTTAACAAg < 2:3682151/91‑1 (MQ=14) ccaccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGc > 1:2008631‑M1/70‑91 (MQ=255) acaccccaactcgcattgcctgtagaatttcttttcgaaattctctatgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGc > 1:3307100‑M1/70‑91 (MQ=255) caccccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagagtTGAAAATGCGCTTGCAACAAGCt > 2:1314300‑M1/69‑91 (MQ=255) accccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagagtTGAAAATGCGCTTGCAACAAGCtt > 1:876611‑M1/68‑91 (MQ=255) accccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtt > 1:3202210‑M1/68‑91 (MQ=255) accccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtt > 1:334705‑M1/68‑91 (MQ=255) gatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttt > 1:2291308/1‑91 (MQ=33) gatCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCttt > 2:2918876/1‑91 (MQ=33) ccccagcttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGCttt > 2:970521‑M1/67‑91 (MQ=255) ccccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGCttt > 1:477159‑M1/67‑91 (MQ=255) ccccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagagtTGAAAGTGCGCTTGCAACAAGCttt > 2:3461564‑M1/67‑91 (MQ=255) ccccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCttt > 1:2650069‑M1/67‑91 (MQ=255) ccccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCttt > 1:2161197‑M1/67‑91 (MQ=255) cccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGCtttt > 1:1568935‑M1/66‑91 (MQ=255) cccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAATAAGCtttt > 1:2996054‑M1/66‑91 (MQ=255) cccaactcgcattgcctgtagaatttcttttcgaaattctctatgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtttt > 1:292460‑M1/66‑91 (MQ=255) atCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCtttt > 1:659319/1‑91 (MQ=32) ccccaactctcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactgaaCGAAAATGCGCTTGTAACAAGCttttt > 1:3780955‑M1/65‑91 (MQ=255) ccaacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCttttt > 1:3219562‑M1/65‑91 (MQ=255) ccaactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAATAAGCttttt > 2:1519702‑M1/65‑91 (MQ=255) caacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtttttt > 1:2189833‑M1/64‑91 (MQ=255) caactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagagtTGAAAATGCGCTTGCAACAAGCtttttt > 1:3511022‑M1/64‑91 (MQ=255) caactcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtttttt > 1:695733‑M1/64‑91 (MQ=255) caactcgcattgcctgtagaatttcttttcgaaattctctatgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCtttttt > 1:2050275‑M1/64‑91 (MQ=255) aacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatCGAAAATGCGCTTGTAACAAGCTTTTTTc > 1:1322901‑M1/63‑91 (MQ=255) aactcgcattgcctgtagaatttcttttcgaaattctctatgttggggcccctgactagaatTGAAAATGCGCTTGTAACAAGCTTTTTTc > 1:572954‑M1/63‑91 (MQ=255) actcgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaatTGAAAATGCGCTTGTAATAAGCTTTTTtca > 1:3942026‑M1/62‑90 (MQ=255) cttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactagaacTGAAAATGCGCTTGTAACAAGCTTTTttcaa > 2:3026584‑M1/61‑89 (MQ=255) aacttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactgaaCGAAAATGCGCTTGTAACAAGCTTTTTTCGa > 1:894895‑M1/61‑91 (MQ=255) cTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGAt > 2:927976/1‑91 (MQ=33) cTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGAt > 1:2523756/1‑91 (MQ=33) cTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGAt < 1:1063712/91‑1 (MQ=33) cttgcattgcctgtagaatttcttttcgaaattctctgtgttggggcccctgactgaaCGAAAATGCGCTTGTAACAAGCTTTTTTCGAtt > 1:848105‑M1/59‑91 (MQ=255) ggACATAAATCAATGTTCTATGCTCTACGAAGTGATCTTGGCAGTAGTTGACTGAGCGAAACTGCGCTGGTAACAAGCTTCTCTCGATTCt > 2:1599279/1‑91 (MQ=11) cATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGt < 2:221680/91‑1 (MQ=34) aTAAATCAATGTTCTATGCTCTACGGAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTc < 1:2790964/91‑1 (MQ=21) aTAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTc > 1:620213/1‑91 (MQ=34) tAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCa > 1:121824/1‑91 (MQ=34) tAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCa > 2:3613830/1‑91 (MQ=34) aTCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAggg > 1:751742/1‑91 (MQ=34) aTCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAggg < 1:1806706/91‑1 (MQ=34) tCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAgggg < 1:451454/91‑1 (MQ=34) aTGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGccc > 2:3155325/1‑91 (MQ=34) tGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGcccc < 1:234947/91‑1 (MQ=34) ttCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCaa > 2:565214/1‑91 (MQ=34) aTGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAAcaca < 1:2397076/91‑1 (MQ=34) aTGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAAcaca < 2:2683083/91‑1 (MQ=34) aTGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAAcaca > 1:954127/1‑91 (MQ=34) tGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACag > 2:3369748/1‑91 (MQ=34) tGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACag > 1:1709421/1‑91 (MQ=34) tGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACag < 1:1456020/91‑1 (MQ=34) tGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACag > 2:2401837/1‑91 (MQ=34) gCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACaga > 2:3845458/1‑91 (MQ=34) gCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACaga < 1:3125550/91‑1 (MQ=34) ctctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACagag > 1:1070456/1‑91 (MQ=34) tctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAgaga > 2:1177763/1‑91 (MQ=34) tctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAgaga < 1:2661699/91‑1 (MQ=34) ctACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGaa > 2:3224364/1‑91 (MQ=34) aCGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAAtt > 2:2767921/1‑91 (MQ=33) cGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAAttt < 1:3615271/91‑1 (MQ=34) gAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTc < 1:2711791/91‑1 (MQ=34) aGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGa > 1:3566010/1‑91 (MQ=34) gTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTTGTTTCTTTTCAGGGGCCCCAACACAGAGAATTTCGaa > 2:2643914/1‑91 (MQ=11) ttATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGaaa > 1:2092471/1‑91 (MQ=34) tataTTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTTGTTTTTTGTCAGGGGCCCCAACCCAGAGAATTTCGaaaa > 2:2841344/1‑91 (MQ=11) atatTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAg < 2:1393339/91‑1 (MQ=33) atacTGGCAGTAGTTGACTGAACGAAAGTGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAg < 2:2836933/91‑1 (MQ=16) tatTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGa < 2:147838/91‑1 (MQ=34) tatTGGCAGTAGTTGACGGAGCGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGa < 2:1709081/91‑1 (MQ=255) ggCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAAtt < 2:1937001/91‑1 (MQ=34) gCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTc > 1:2470966/1‑91 (MQ=34) gCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTc < 2:594978/91‑1 (MQ=33) tagtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACa > 1:1666037/1‑91 (MQ=34) agtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAg > 2:1811826/1‑91 (MQ=34) agtTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAg < 1:3836483/91‑1 (MQ=34) ttGACTGAACGAAAAGGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCTAAAAGAAATTCTACAGGc < 2:207211/91‑1 (MQ=16) aCTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAAt > 1:1779894/1‑91 (MQ=34) tGAACGAAAATGCGCTTGTAACGAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGc < 2:3187432/91‑1 (MQ=21) aCGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAg < 1:1943985/91‑1 (MQ=34) aCGAAAATGCGCGTGTAACTAGCTGTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATGTCGAAAAGAAAGTCTACAGGCAATGCAAg < 2:489438/91‑1 (MQ=11) CGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGt > 2:3263106‑M1/1‑91 (MQ=255) | AAATAACTAACATAACAAGATGATGATCAGGCTGGGACATAAATCAATGTTCTATGCTCTACGAAGTTATATTGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAGGGGCCCCAACACAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGT > USA300TCH1516_ALE/2580467‑2580647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |