| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 974266 | 195 (0.960) | 17 (0.100) | 8/136 | NT | 8.4% | intergenic (+109/‑438) | mrp/oatA_1 | Iron‑sulfur cluster carrier protein/O‑acetyltransferase OatA |
| ? | USA300TCH1516_ALE | = 974288 | 205 (1.190) | intergenic (+131/‑416) | mrp/oatA_1 | Iron‑sulfur cluster carrier protein/O‑acetyltransferase OatA | |||||
TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/974165‑974266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcccttcaaaATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACAG < USA300TCH1516_ALE/974288‑974199 gTGCATTGGCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G < 2:85495/90‑1TTGCGTTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G < 2:1191465/91‑1TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G < 2:697067/91‑1TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G > 2:3740094/1‑91TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G > 1:251795/1‑91TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G > 1:3098703/1‑91TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATGGTGAATAA‑G < 2:216043/91‑1TTGCAGTGCCTGTAGAATTTCTTTTCGAGATGCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑G < 2:2541759/91‑1 TGCATTGGATGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGGTCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑Gg > 2:2610680/1‑90 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCCTTGTGAATAA‑GC > 2:3285595/1‑91 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCCTTGTGAATAA‑GC > 2:3285948/1‑91 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GC < 2:3109582/91‑1 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GC < 2:3109608/91‑1 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GC > 1:1131897/1‑91 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GC > 1:3212803/1‑91 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GC < 1:2873355/91‑1 TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GC > 1:2553624/1‑91 GCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCT > 1:2237075/1‑91 CATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTC > 1:769374/1‑91 CATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTC < 1:3643429/91‑1 ATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCC > 1:3722744/1‑91 ATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCC < 2:1835465/91‑1 TTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCC > 2:780223/1‑91 TTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCC < 1:44664/91‑1 TTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCC < 1:1884601/91‑1 TGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAT‑GCTCCCT > 2:3519913/1‑91 TGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAC‑GCTCCCc > 2:3519987/1‑90 TGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCT < 1:2672377/91‑1 TGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCT > 2:3520013/1‑91 TGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCT > 2:3520221/1‑91 GCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTT < 2:1225398/91‑1 CCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTC < 1:1512449/91‑1 CCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTC < 1:1512024/91‑1 CCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTC > 2:3286993/1‑91 CCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTC > 1:2958555/1‑91 CTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCA > 2:3547067/1‑91 CTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCA < 2:2099889/91‑1 CTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCA < 2:3899444/91‑1 TGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAA > 1:618684/1‑91 GTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAA < 2:2253722/91‑1 GTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAA > 1:158878/1‑91 CTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTA < 1:2821684/91‑1 CTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTA < 2:2970545/91‑1 TCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTAC < 1:2321359/91‑1 TCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTAC < 1:907445/91‑1 CTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACT < 2:1047114/91‑1 CTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACT < 2:1047578/91‑1 CTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACT < 2:1047605/91‑1 CTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACT < 1:1205961/91‑1 CTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACT < 1:2584485/91‑1 CTGGGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATGATTCATTGTGAATAA‑GCTCCCTTGAAAATTTTCAGTGTTCAATGTCTACT < 2:3816324/91‑1 TGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTT < 1:2243127/91‑1 TGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTT < 1:429129/91‑1 TTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAAGGCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGA < 2:3604017/91‑1 CCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAAGGCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAG < 2:483580/91‑1 CCCGCAGTCAATATAACATTGTAGAGTATAATTCATGGTGAATAAGGCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAG < 2:3114834/91‑1 CGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAAGGCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCT < 2:877051/91‑1 TCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCA < 1:283260/91‑1 aagaCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGC < 1:3561829/87‑1 GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGG < 2:3732940/91‑1 GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGG < 1:2407288/91‑1 GCTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACCGCGGG < 1:2408740/91‑1 CTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGC > 1:3806878/1‑91 CTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGC < 2:3095319/91‑1 CTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGC < 2:2973349/91‑1 CTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGC < 1:12236/91‑1 CTCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGC < 1:1454291/91‑1 TCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTCTTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCC > 1:3130240/1‑91 TCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCC > 1:181111/1‑91 TCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCC < 1:3216984/91‑1 TCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCC > 1:3130020/1‑91 TCCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCC > 1:44675/1‑91 CCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCC < 2:558337/91‑1 CCCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCC < 1:2545817/91‑1 CCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCA < 1:2034124/91‑1 CCTTCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCA < 2:1252565/91‑1 CCTGCAAACTTTTCATATTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACGATAGAATGTTATATGGACTGCGGGCCCA < 2:3310883/91‑1 TCAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAAC > 1:84879/1‑91 CAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACA < 1:2011119/91‑1 CAAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACA > 2:2230488/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGTGCTTATTCACAATGAATTATACTCTACTATGTTATATCGATTGCGGGCCCAAACAC > 1:1593822/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 2:724471/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 1:1185524/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC < 2:676960/91‑1 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 1:2499256/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 2:3165253/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 1:3853658/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 2:2892872/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 2:2892515/1‑91 AAAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACAC > 1:631939/1‑91 AAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACA < 1:3099368/91‑1 AAATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACA < 2:3949684/91‑1 AATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAATACAG < 1:3125219/91‑1 AATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACAG < 2:1551356/91‑1 AATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACAG < 2:1551552/91‑1 AATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACAG < 2:1551645/91‑1 TTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTTGGGCCCGCAGTCAATATAACATTGTAGAGTATAATTCATTGTGAATAA‑GCTCCCTTCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/974165‑974266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcccttcaaaATTTTCATTTTTCAATGTCTACTTTGAAGGGAGCTTATTCACAATGAATTATACTCTACAATGTTATATTGACTGCGGGCCCAAACACAG < USA300TCH1516_ALE/974288‑974199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |