| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1131052 | 155 (0.760) | 13 (0.080) | 5/126 | NT | 8.7% | intergenic (+16/+47) | USA300HOU_RS05590/glpQ1 | hypothetical protein/putative glycerophosphodiester phosphodiesterase 1 |
| ? | USA300TCH1516_ALE | = 1131083 | 151 (0.940) | intergenic (+47/+16) | USA300HOU_RS05590/glpQ1 | hypothetical protein/putative glycerophosphodiester phosphodiesterase 1 | |||||
AGAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1130946‑1131052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacatcgagtcagaTGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACTA < USA300TCH1516_ALE/1131083‑1130994 AGAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAA < 2:942671/91‑1AGAACATGGCAAAATAGAAACAGGTAATCCATACTTTCAAATAACACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTAATTATAA < 2:3465901/91‑1 GAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAA > 1:1213902/1‑91 GAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAA < 2:3014820/91‑1 GAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTAATTATAAA < 2:3014225/91‑1 GAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATACTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAA > 2:3477327/1‑91 AACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAA > 1:988055/1‑91 AACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAA > 1:357446/1‑91 ACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAA > 2:3736199/1‑91 ATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAAC < 2:2390022/91‑1 ATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAAC > 1:421068/1‑91 ATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAAC > 1:2118770/1‑91 GTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACAT > 1:856816/1‑91 GTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACAT > 1:2648524/1‑91 GTCAAAANAGANANAGGTAATCCATTCTTTCNAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACAT < 1:369217/91‑1 TCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATC > 2:2577422/1‑91 CAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCG > 1:1654681/1‑91 AAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGA > 2:2716193/1‑91 AAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGA > 2:1972645/1‑91 AAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAG < 2:2087401/91‑1 AAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAG > 1:709593/1‑91 AAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAG > 1:645811/1‑91 AAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAG > 1:2658830/1‑91 AATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGT < 1:268651/91‑1 ATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTC > 2:3342325/1‑91 ATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTC < 1:1805563/91‑1 AGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAG < 1:1056499/91‑1 AGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAG < 1:924551/91‑1 AGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAG < 1:300035/91‑1 AGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAG < 1:423230/91‑1 GAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGA > 2:2042893/1‑91 TAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTT < 2:2777046/91‑1 TAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTT < 1:3729921/91‑1 TAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTT < 2:311718/91‑1 TAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTT < 2:2776491/91‑1 TAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTT < 1:717677/91‑1 AGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATTACCACCTTTTTC < 1:3045873/91‑1 AGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTC < 2:1115290/91‑1 TGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTG < 2:264221/91‑1 TGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTG < 2:264220/91‑1 TGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGGTAGTGGTTTCAATAACCACCTTTTTCTG < 2:742435/91‑1 TGTGCGATGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTC < 1:3347072/91‑1 gGCGACGGGCGGATCCTGTAATTGTTCAGTATAAAGAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGA < 2:497829/90‑1 TGCGGCGGGCGGATTCTGTAATTGTTCATTATAAAAAACATCGAGACAGATGCTAGTTAGTGGTTTCAAGAACCACCTTTTTCTGACTCGA < 2:497820/91‑1 AAAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCC > 1:576704/1‑91 AAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTTACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCC > 2:587889/1‑91 AAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCC < 1:1856061/91‑1 AAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCC < 2:2845911/91‑1 AAAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCC > 2:587655/1‑91 tccCATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCG < 1:718127/88‑1 AAACATCGAGTCAGATGCTAGTTAGTGGTTTCAGTAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCG < 2:1122813/91‑1 AAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCG < 1:779616/91‑1 AAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCG < 1:1866405/91‑1 ACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTC < 2:1095098/91‑1 ACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTC > 2:3678424/1‑91 CATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCG > 1:628878/1‑91 ATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGC < 2:3889066/91‑1 TCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTTGATGTTTTTTATAATGAACAATTACAGGATCCGCTCGTCGCA > 2:1945305/1‑91 TCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCA > 2:2994232/1‑91 TCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCA < 1:1039730/91‑1 TCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCA < 1:1039582/91‑1 TCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCA < 1:680087/91‑1 CGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCAC > 1:3613115/1‑91 CGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCAC < 2:3940162/91‑1 CGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCAC < 2:3940121/91‑1 CGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCAC > 2:2184950/1‑91 CGAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTGTTTCTGACGCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCAC < 2:3939894/91‑1 ggGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA < 2:783453/89‑1 GAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA > 1:1219889/1‑91 GAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA > 1:2917644/1‑91 GAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA < 2:3623996/91‑1 GAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA > 1:3745741/1‑91 GAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA > 2:1807753/1‑91 GAGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACA < 1:3586273/91‑1 AGTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAA < 2:348331/91‑1 GTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAAC < 1:2169226/91‑1 GTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAAC > 2:2839361/1‑91 GTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAAC > 2:1112153/1‑91 GTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAAC > 1:779377/1‑91 GTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAAC > 1:2600908/1‑91 GTCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAAC < 1:1616179/91‑1 TCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACC < 1:486744/91‑1 TCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACC > 2:17969/1‑91 TCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACC < 2:1419193/91‑1 TCAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACC > 2:2097716/1‑91 CAGATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATATTTAATAATTACAGGATCCGCCCGTCGCACAACCA > 2:3091134/1‑91 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACT > 2:1432856/1‑91 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACT > 1:1576447/1‑91 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACT < 2:1920968/91‑1 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACT > 1:840828/1‑91 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACT < 2:1180705/91‑1 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACT < 2:266877/91‑1 GATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCAGCCCGTCGCACAACCACT > 1:1322868/1‑91 ATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGTTTCTATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACTA > 2:3048000/1‑91 ATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACTA > 2:2482460/1‑91 ATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACTA > 2:3588871/1‑91 ATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACTA > 1:1539915/1‑91 ATGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACACGCCCCCCCCGTCCCACAACCACca > 2:3836098/1‑89 AGAACATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTTGTGCGACGGGCGGATCCTGTAATTGTTCATTATAAAAAACATCGAGTCAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > USA300TCH1516_ALE/1130946‑1131052‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaacatcgagtcagaTGCTAGTTAGTGGTTTCAATAACCACCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACAGGATCCGCCCGTCGCACAACCACTA < USA300TCH1516_ALE/1131083‑1130994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |