| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1332932 = | 122 (0.600) | 14 (0.090) | 5/124 | NT | 11.7% | intergenic (+142/+80) | hfq/bsaA_1 | RNA‑binding protein Hfq/Glutathione peroxidase BsaA |
| ? | USA300TCH1516_ALE | 1332990 = | 117 (0.740) | intergenic (+200/+22) | hfq/bsaA_1 | RNA‑binding protein Hfq/Glutathione peroxidase BsaA | |||||
Only 100 of 337 total aligned reads displayed.
TATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATT > USA300TCH1516_ALE/1332842‑1333022 | ttgttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaata > 1:3404562‑M1/91‑91 (MQ=255)ttgttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaata > 2:846165‑M1/91‑91 (MQ=255)ttgttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaata > 2:3491175‑M1/91‑91 (MQ=255)ttgttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaata > 2:3357209‑M1/91‑91 (MQ=255) gttaaacgatttgcacctcaaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataa < 1:3428162‑M1/2‑1 (MQ=255) aTGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAA > 2:3797027‑M1/1‑91 (MQ=255) tGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAA > 2:2216519‑M1/1‑91 (MQ=255) gttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataaa > 1:337914‑M1/89‑91 (MQ=255) gttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataaa > 1:1650522‑M1/89‑91 (MQ=255) gttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataaa > 1:804820‑M1/89‑91 (MQ=255) gttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataaa < 2:2983064‑M1/3‑1 (MQ=255) ttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataaaa > 1:765490‑M1/88‑91 (MQ=255) ttaaacgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaataaaa > 1:1284925‑M1/88‑91 (MQ=255) gATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA > 2:2065547‑M1/1‑91 (MQ=255) aaTAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCT < 1:1421846‑M1/91‑1 (MQ=255) aaTAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCT < 1:2089210‑M1/91‑1 (MQ=255) cgatttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCtt > 1:97847‑M1/83‑91 (MQ=255) tAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTC > 1:2445503‑M1/1‑91 (MQ=255) tAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTC < 1:2226766‑M1/91‑1 (MQ=255) atttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCa > 1:2643346‑M1/81‑91 (MQ=255) atttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCa > 2:2532569‑M1/81‑91 (MQ=255) atttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCa > 1:312330‑M1/81‑91 (MQ=255) tttgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCat < 1:2547052‑M1/12‑1 (MQ=255) tgcacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCatat < 2:1636739‑M1/14‑1 (MQ=255) tataGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATAT < 1:1820814‑M1/91‑1 (MQ=255) tataGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATAT > 2:239707‑M1/1‑91 (MQ=255) tataGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATAT > 1:2894894‑M1/1‑91 (MQ=255) gcacctcaaaaaaaaacctgttcaaatcgaaagagaaatagaaaaataattataaaataaacaagaacatagcaaatAAAA‑CGCATCatat < 2:723527‑M1/14‑1 (MQ=255) ataGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATA > 1:1995290‑M1/1‑91 (MQ=255) cacctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATaa < 2:1359149‑M1/16‑1 (MQ=255) acctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATaaa < 2:2869352‑M1/17‑1 (MQ=255) cctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATAAA‑g < 1:2194975‑M1/18‑1 (MQ=255) cctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATAAA‑g > 2:3522069‑M1/74‑91 (MQ=255) cctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATAAA‑g < 2:3628219‑M1/18‑1 (MQ=255) cctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATAAA‑g < 1:485449‑M1/18‑1 (MQ=255) cctcaaaaaaaacctgttcaaatcgaaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑AGcttcatatcaac < 2:2298708‑M1/18‑5 (MQ=255) aaTAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGt < 2:2477808/91‑1 (MQ=255) aaTAAAGTCATATGTGACATCAATTAAATGATGTTAAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGt < 2:3267844/91‑1 (MQ=255) tAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCg > 2:502498/1‑91 (MQ=255) tAAAGACATATGTGACATCAAATAAAAGATGATCAAATGACAAGATACAATAGAGGAAAGTTTGAAAAAAAAA‑CGCTTCATATAAA‑GGTCg < 2:1257230/91‑1 (MQ=255) aaGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAg > 1:3271130/1‑91 (MQ=255) aaGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAg > 1:386396/1‑91 (MQ=255) aGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGt < 2:3045069/91‑1 (MQ=255) atGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAatat < 1:691954/91‑1 (MQ=255) gACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGa > 2:1990211/1‑91 (MQ=255) cATCAATTAAATGATGTTCAAATGACAAGATACGATAGAGGAAGGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATa < 2:2939599/91‑1 (MQ=255) aTCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAACAA‑CGCTTCATATAAA‑GGACGAGTCAATACATGATAc > 2:3511323/1‑91 (MQ=255) aTCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATAc > 2:488307/1‑91 (MQ=255) aaTTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGAc < 2:1479771‑M2/91‑2 (MQ=255) aTTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑Gtcgtatcatatattgactcgacct < 1:2722701‑M1/91‑25 (MQ=255) ttAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑Gtcgtatcatatattgactcgacctt < 2:635075‑M1/91‑26 (MQ=255) aaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAAACGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACt > 2:130478‑M1/49‑91 (MQ=255) aaagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACtt > 1:2428644‑M1/49‑91 (MQ=255) aagagaaatagaaaaattattataaaatatactagctcatagcaaatAAAAACGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACtt > 2:2965878‑M1/48‑91 (MQ=255) aaaTGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActtta > 1:429015‑M2/1‑86 (MQ=255) atgatgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttata < 1:1035711‑M2/91‑8 (MQ=255) atgatgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttata > 1:3050123‑M2/1‑84 (MQ=255) atgatgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttata < 1:79788‑M2/91‑8 (MQ=255) agaaatagaaaaattattataaaatatactagctcatagcaaatAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTtata > 2:795658‑M1/45‑91 (MQ=255) tgatgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatat < 2:2143245‑M2/91‑9 (MQ=255) gatgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatatg > 1:1222984‑M2/1‑82 (MQ=255) tgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatatgaa > 2:2250715‑M2/1‑80 (MQ=255) tgTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatatgaa > 1:3815871‑M2/1‑80 (MQ=255) tCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatatgaagcg > 1:2590103‑M2/1‑77 (MQ=255) cAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatatgaagcgt > 1:1765692‑M2/1‑76 (MQ=255) cAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttagatgaaccgt < 1:3555948‑M2/91‑16 (MQ=255) aaTGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGActttatatgaagcgttt > 2:2696575‑M2/1‑74 (MQ=255) tGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAAGGtcgtatcatatattgactcgacctttatatgaagcgtttt < 1:2459741‑M1/91‑41 (MQ=255) gACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTAt < 1:115727/91‑1 (MQ=255) aCAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTAtt < 2:1540896/91‑1 (MQ=255) aTACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTa < 1:111966/91‑1 (MQ=255) tAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTCTGAGCt > 1:1701920/1‑91 (MQ=255) agagGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTa > 2:104610/1‑91 (MQ=255) agagGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTa < 2:1786294/91‑1 (MQ=255) agagGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTa < 2:1522155/91‑1 (MQ=255) gagGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAg > 2:3859458/1‑91 (MQ=255) gagGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAg < 1:2750920/91‑1 (MQ=255) agGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGt < 1:501736/91‑1 (MQ=255) agGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGt > 2:1138250/1‑91 (MQ=255) ggAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGta < 2:1708769/91‑1 (MQ=255) ggAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGta > 2:3585682/1‑91 (MQ=255) ggAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGta < 1:113526/91‑1 (MQ=255) gAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGtat > 2:1873861/1‑91 (MQ=255) aTGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTatat < 2:2204509/91‑1 (MQ=255) tGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATAtt > 2:573697/1‑91 (MQ=255) gTTTGTAATAAAAA‑CGCTTCATATATA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATAttt < 1:3695040/91‑1 (MQ=255) gTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATAttt > 1:1585592/1‑91 (MQ=255) tGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTGAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTtat > 2:3878735/1‑91 (MQ=255) tGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGTGTTTTATTTGCTATGAGCTAGTATATTTtat > 1:2341754/1‑91 (MQ=255) tGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTtat > 1:456189/1‑91 (MQ=255) gTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTtata < 2:279143/91‑1 (MQ=255) taataaAAA‑CGCTTCATATAAA‑GGTCGCGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTataa > 2:2737328/1‑91 (MQ=255) taataaAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTataa < 1:136222/91‑1 (MQ=255) taataaAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATACGATACGACCTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTataa > 1:3152344/1‑91 (MQ=255) aataaAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTataat < 2:3713366/91‑1 (MQ=255) taaAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTAtaataa < 1:1950291/91‑1 (MQ=255) taaAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTAtaataa < 1:2888855/91‑1 (MQ=255) aaaa‑CGCTTCATATAAA‑Gtcgtatcatatattgactcgacctttatatgaagcgtttttattacaaacattcctctattgtatcttgtcat > 2:1940304‑M1/1‑18 (MQ=255) aaaa‑CGCTTCATATAAA‑Gtcgtatcatatattgactcgacctttatatgaagcgtttttattacaaacattcctctattgtatcttgtcat > 2:1940851‑M1/1‑18 (MQ=255) AAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAAtt < 1:1186633‑M1/91‑1 (MQ=255) | TATGATAAATAGATATAGAAATAAAGTCATATGTGACATCAATTAAATGATGTTCAAATGACAAGATACAATAGAGGAATGTTTGTAATAAAAA‑CGCTTCATATAAA‑GGTCGAGTCAATATATGATACGACTTTATATGAAGCGTTTTATTTGCTATGAGCTAGTATATTTTATAATAATT > USA300TCH1516_ALE/1332842‑1333022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |