| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1364100 | 155 (0.760) | 9 (0.050) | 4/144 | NT | 5.8% | coding (157/1518 nt) | katA | Catalase |
| ? | USA300TCH1516_ALE | = 1364118 | 154 (0.840) | coding (175/1518 nt) | katA | Catalase | |||||
Only 100 of 243 total aligned reads displayed.
ATGACAGCAGGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATTCTCTG > USA300TCH1516_ALE/1364010‑1364190 | gtgACAGCAGGGCCTAGGGGGCCTCTTTTAATGCAAGATATTTACTGTTTAGGGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAAC < 2:2786225‑M1/90‑1 (MQ=255)aTGACAGCAGGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGAAAATGTCTCAATTTGATAGAGAAGTAATACCAGAAC > 2:3114222‑M1/1‑91 (MQ=255) gACAGCAGGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGt < 1:3637068/91‑1 (MQ=255) cagcagGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCg < 1:2489879/91‑1 (MQ=255) cagcagGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCg < 1:3890038/91‑1 (MQ=255) cagGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAat > 1:596669/1‑91 (MQ=255) agGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatg > 1:2390693/1‑91 (MQ=255) gggCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgc < 2:2650590/91‑1 (MQ=255) gggCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgc < 1:3913533/91‑1 (MQ=255) gggCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgc < 1:1059262/91‑1 (MQ=255) ggCCTAGAGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgca < 2:3521592/91‑1 (MQ=255) gCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgcat > 2:2180259/1‑91 (MQ=255) ccTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgcatg < 2:1096975/91‑1 (MQ=255) ccTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgcatg < 1:2778241/91‑1 (MQ=255) cTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgcatgc < 1:2796891/91‑1 (MQ=255) cTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAatgcatgc < 1:2796802/91‑1 (MQ=255) aGGGGGCCTCTTTTAATGCAAGATATTTACTGTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCa < 2:2574510/91‑1 (MQ=255) aGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCa < 1:695966/91‑1 (MQ=255) aGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCa < 2:2946840/91‑1 (MQ=255) aGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCa < 2:864620/91‑1 (MQ=255) aGGGGACCTCTTGTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCa < 2:3288792/91‑1 (MQ=255) gggACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCaaa < 1:1829136/91‑1 (MQ=255) ggACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAg < 2:2710157/91‑1 (MQ=255) gACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGg > 2:693584‑M2/1‑90 (MQ=255) gACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGg < 1:2896708‑M2/91‑2 (MQ=255) aCCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACctttggcatgcattcgacgt < 2:425346‑M1/91‑21 (MQ=255) ctctTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACctttggcatgcattcgacgttc < 1:115847‑M1/91‑23 (MQ=255) ctctTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACctttggcatgcattcgacgttc < 2:761554‑M1/91‑23 (MQ=255) ctctTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACctttggcatgcattcgacgtcc < 1:116171‑M1/91‑23 (MQ=255) ctctTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttc < 1:2127790‑M2/91‑5 (MQ=255) ttttAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttctgg > 1:533931‑M2/1‑84 (MQ=255) ttttAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttctgg > 2:1530106‑M2/1‑84 (MQ=255) ttttAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttctgg < 1:2585705‑M2/91‑8 (MQ=255) ttttAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttctgg < 1:3747367‑M2/91‑8 (MQ=255) tttAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttctggt < 2:431932‑M2/91‑9 (MQ=255) tttAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGgttctggt < 2:2321798‑M2/91‑9 (MQ=255) tAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGc < 2:662066/91‑1 (MQ=255) aaTGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGcc > 1:1261561/1‑90 (MQ=255) tGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCAtt < 2:717460/91‑1 (MQ=255) tGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCAtt < 1:3841899/91‑1 (MQ=255) gCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTGGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCAtta < 2:3910178/91‑2 (MQ=255) cAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTg < 2:702950/91‑1 (MQ=255) cAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTg > 1:2717467/1‑91 (MQ=255) cAAGATATTTACGTGTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAGCGTCGAATGCATGCCAAAGGTTCTGGTGCATTTg < 2:454266/91‑1 (MQ=255) cAAGATAGTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTTCATTTg < 2:602425/91‑1 (MQ=255) aaGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTgg < 2:3088566/91‑1 (MQ=255) aaGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTgg < 1:3714589/91‑1 (MQ=255) atgtACTTTTTAGAGCAAATGTCTCAATTGGATAGAGAAGGAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACAt < 2:1251793/88‑1 (MQ=255) atTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACAt > 2:2081130/1‑91 (MQ=255) tACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTa < 1:2073949/91‑1 (MQ=255) tACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTa > 1:2227430/1‑91 (MQ=255) cTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACt < 1:2065619/91‑1 (MQ=255) cTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACt < 2:3486908/91‑1 (MQ=255) tttttAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTg < 1:1172494/91‑1 (MQ=255) ttttAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGt < 2:2631441/91‑1 (MQ=255) ttAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTaa > 1:3756178/1‑91 (MQ=255) agagCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACt < 1:1564695/91‑1 (MQ=255) aaaTGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGa < 2:1613850/91‑1 (MQ=255) aaTGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGat > 2:1732113/1‑91 (MQ=255) aTGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGata > 1:3452320/1‑91 (MQ=255) ctcAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAAc > 1:3413084/1‑91 (MQ=255) cAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTTATGCATTTGGGACATTTACTGTAACTAAAGATATAACaa > 1:1488636/1‑91 (MQ=255) aaTTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACaaa > 2:2269013/1‑91 (MQ=255) tttGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAat < 1:1741936/91‑1 (MQ=255) tttGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAat < 1:1741950/91‑1 (MQ=255) ttGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAata > 2:1438883/1‑91 (MQ=255) tGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAatat < 1:520858/91‑1 (MQ=255) gATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAAtata < 1:925999/91‑1 (MQ=255) gATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAAtata > 1:2124606/1‑91 (MQ=255) gATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAAtata > 1:335734/1‑91 (MQ=255) aTAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATAc > 2:3329431/1‑91 (MQ=255) tAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTaa > 1:2303459/1‑91 (MQ=255) aaTACCAGAACGTCGAATGCATGCCAAAGgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcatt < 1:721878‑M2/91‑63 (MQ=255) aaTACCAGAACGTCGAATGCATGCCAAAGgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcatt < 1:721910‑M2/91‑63 (MQ=255) aaTACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTaaa > 1:2471972/1‑91 (MQ=255) aaTACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTaaa < 1:1323279/91‑1 (MQ=255) aTACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTaaaa > 1:2249695/1‑91 (MQ=255) tACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAat < 1:2751252/91‑1 (MQ=255) aCCAGAACctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaa > 2:1876028‑M1/1‑8 (MQ=255) aCCAGAACctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaa < 2:753394‑M1/91‑84 (MQ=255) aCCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAata > 1:934940/1‑91 (MQ=255) ccAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAatat < 1:1258318/91‑1 (MQ=255) cAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATAtt > 1:1655916/1‑91 (MQ=255) cAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATAtt > 1:1805596/1‑91 (MQ=255) cAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATAtt < 2:3706770/91‑1 (MQ=255) aGAACctttggcatgcattcggcgttctggtattacttctctatcaggttgagacatatgcgctaaaaagtaaatatcttgcattaaaaga < 2:1003606‑M1/91‑87 (MQ=255) aGAACctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaaga < 1:1621324‑M1/91‑87 (MQ=255) aGAACctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaaga < 2:1810263‑M1/91‑87 (MQ=255) aGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATtc > 2:1994103/1‑91 (MQ=255) aGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATtc > 2:1994228/1‑91 (MQ=255) gAACctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaagag > 2:2727245‑M1/1‑4 (MQ=255) gAACctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaagag < 1:1790624‑M1/91‑88 (MQ=255) gAACGTCGAATGCATGCCAAAGgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaagag < 2:761575‑M2/91‑70 (MQ=255) gAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATtct > 1:2876555/1‑91 (MQ=255) gAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATtct < 1:1507022/91‑1 (MQ=255) aaCctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaagagg < 2:947329‑M1/91‑89 (MQ=255) aaCGTCGAATGCATGCCAGAGGTTCTGGTGCATTTGGGACAGTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATtctc < 2:1373411/91‑1 (MQ=255) aaCGTCGAATGCATGCCAAAGGTTGTGGTGCATTTGGGTCATTTACTGGAACTAAAGATATAACAAAATATACGAATGCGAAGAGATtctc < 2:2819994/91‑1 (MQ=255) cctttggcatgcattcgacgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaagaggtc < 2:989355‑M1/91‑91 (MQ=255) cGTCGAATGCATGCCAAAGgttctggtattacttctctatcaaattgagacatttgctctaaaaagtaaatatcttgcattaaaagaggtc < 1:454855‑M2/91‑73 (MQ=255) | ATGACAGCAGGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAGCAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCTGGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATATTCTCTG > USA300TCH1516_ALE/1364010‑1364190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |