| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1456948 = | 224 (1.100) | 43 (0.230) +GTTTT |
13/150 | NT | 18.5% | intergenic (‑62/‑182) | USA300HOU_RS07230/USA300HOU_RS07235 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 1918540 | 180 (0.880) | intergenic (‑258/+240) | USA300HOU_RS07235/USA300HOU_RS09510 | hypothetical protein/hypothetical protein | |||||
Only 100 of 296 total aligned reads displayed.
CAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTCAGAAAAG > USA300TCH1516_ALE/1456858‑1457037 | ttctagcacgtagagatgcattttttgtgacaatggtagaaccttttctgaacgatacgcatagcgtatggttttctttttacaaaaaaca > 1:3328472‑M1/91‑91 (MQ=255)ttctagcacgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaaca > 1:3643372‑M1/91‑91 (MQ=255)ttctagcacgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaaca < 1:2629134‑M1/1‑1 (MQ=255)caACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTtata > 1:2331469/1‑91 (MQ=255) tagcacgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacaaaa > 1:547200‑M1/88‑91 (MQ=255) tagcacgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacaaaa > 1:3218804‑M1/88‑91 (MQ=255) gTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAg < 1:3591403/91‑1 (MQ=255) agcacgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAg < 1:2256986‑M1/5‑1 (MQ=255) agcacgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAg < 2:2987464‑M1/5‑1 (MQ=255) ttCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCa > 2:2644179/1‑91 (MQ=255) ttCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCa > 2:2398139/1‑91 (MQ=255) ttCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCa < 1:3133723/91‑1 (MQ=255) cacgtagagatgcattttttgcgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCa > 2:3132503‑M1/85‑91 (MQ=255) cgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGt < 1:1770070‑M1/9‑1 (MQ=255) cgtagagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGt > 2:726415‑M1/83‑91 (MQ=255) cGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGt > 2:2132500/1‑91 (MQ=255) gTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTa < 1:956764/91‑1 (MQ=255) gTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTa < 2:3342272/91‑1 (MQ=255) gagatgcatttttttttttttttttataaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAAc < 2:2933095‑M1/13‑1 (MQ=255) gagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAAc < 2:862074‑M1/13‑1 (MQ=255) gagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAAc < 1:1691582‑M1/13‑1 (MQ=255) gagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAAc < 2:2475969‑M1/13‑1 (MQ=255) gagatgcattttttgtgacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAAc > 1:1651283‑M1/79‑91 (MQ=255) cTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAAc < 2:2626404/91‑1 (MQ=255) ttgttgGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAAcc < 1:305427/91‑1 (MQ=255) gttgGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCt < 2:1998574/91‑1 (MQ=255) ttgGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCtt > 1:1548742/1‑91 (MQ=255) ttgGATTGATCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATTACAACGTTTTATAAAAGCAGTAAACCCtt < 2:3441790/91‑1 (MQ=255) ggATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTAc > 2:3820899/1‑91 (MQ=255) ggATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTAc < 1:2429766/91‑1 (MQ=255) tGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGaca < 1:3837508/91‑1 (MQ=255) ggTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGacac > 1:2952112/1‑91 (MQ=255) gTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACt > 1:1402812/1‑91 (MQ=255) gTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACt < 2:1454637/91‑1 (MQ=255) tCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACtt > 2:804280/1‑91 (MQ=255) tCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACtt < 1:1879097/91‑1 (MQ=255) ttgacaatagtagaaccttttcttaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAACCCTTACGACACttt > 2:1274879‑M1/65‑91 (MQ=255) cATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACttt > 1:1813306/1‑91 (MQ=255) cATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACatt > 1:3532921/1‑91 (MQ=255) aTTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTa < 2:1367724/91‑1 (MQ=255) gacaatggtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAACCCTTACGACACTTTAg > 1:1295512‑M1/63‑91 (MQ=255) gacaatggtagaaccttttctgaaccatacgcatagcgtatggttgtctttttacaaaaaacAAAAGCAGTAAACCCTTACGACACTTTAg > 2:697732‑M1/63‑91 (MQ=255) tttCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAgg < 2:2429224/91‑1 (MQ=255) aatggtagaaccttttctgaaccatacgcatagcgtatggttttcgttttacaaaaaacAAAAGCAGTAAACCCTTACGACACTTTAGGtt > 2:1013354‑M1/60‑91 (MQ=255) cAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGttt < 2:3845443/91‑1 (MQ=255) gtagaaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACt > 2:1809353‑M1/56‑91 (MQ=255) atTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGc < 1:2710891/91‑1 (MQ=255) tCCCCTTTTATATGCCTGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCtt < 2:3033208/91‑1 (MQ=255) tCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCtt < 2:3491893/91‑1 (MQ=255) tCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCtt < 1:2915816/91‑1 (MQ=255) aaccttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCtt > 1:51084‑M1/52‑91 (MQ=255) accttttctgaaccatacgcatagcgtatggttttctttttacaaaaaacAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCttt > 1:1110149‑M1/51‑91 (MQ=255) ccTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTTCTGCTTTTg > 1:3792398/1‑91 (MQ=255) cTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGt < 1:771681/91‑1 (MQ=255) cTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGt > 1:1506152/1‑91 (MQ=255) tttATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGttt < 2:2802921/91‑1 (MQ=255) ttATATGCCCGTAAAAGACTATTTTCGTTATTGCTACGTTTTCTACCGGCATTAAACCGTTAGGACACTTTAGGTTTACTGCTTTTGtttt < 2:1800722/91‑1 (MQ=255) ttATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGtttt < 1:2580719/91‑1 (MQ=255) tataTGCCCGTAAAGGACAATATGTGTTATAACAACGTTTTATTAAAGCATTAATCCCTTACGACACTTTAGGTTTACTGCTTTTGttttt < 2:3676336/91‑1 (MQ=255) tataTGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGttttt > 2:2300766/1‑91 (MQ=255) atGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGt < 1:2138863/91‑1 (MQ=255) atGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGt > 2:480148/1‑91 (MQ=255) atGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGt > 2:1227929/1‑91 (MQ=255) atGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGt > 1:435067/1‑91 (MQ=255) atGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGt > 2:2559853/1‑91 (MQ=255) tGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTa < 2:2160818/91‑1 (MQ=255) tGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGCTTTACTGCTTTTGTTTTTTGTa > 2:3192222/1‑91 (MQ=255) catatAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTaaa > 1:1736385/5‑91 (MQ=255) cGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTaaaaa < 2:2324038/91‑1 (MQ=255) gTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAg < 1:1986966/91‑1 (MQ=255) aaaaGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGaa < 1:2033847/91‑1 (MQ=255) aaaaGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGaa < 2:1570963/91‑1 (MQ=255) aGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAAc > 2:633867/1‑91 (MQ=255) aCAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTTAAAAGAAAACCa > 2:1718688/1‑91 (MQ=255) ataCGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGc < 1:1139001/91‑1 (MQ=255) taCGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑t > 2:1861719/1‑91 (MQ=255) taCGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑t < 1:2183337/91‑1 (MQ=255) aCGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGcat < 1:691553/91‑3 (MQ=255) aCGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGcat < 2:1127673/91‑3 (MQ=255) aCGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTCTTTGTAAACAGAAACTCATACGcca > 2:3607649/1‑89 (MQ=255) cGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGcata < 1:590551/91‑4 (MQ=255) cGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTGTAGGTTTAGTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGcata < 1:3157196/91‑4 (MQ=255) gTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGcatag < 1:2291457/91‑5 (MQ=255) gTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑g < 1:3898029/91‑1 (MQ=255) ttATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑Gc < 1:1034988/91‑1 (MQ=255) tataACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCg < 1:897808/91‑1 (MQ=255) caacGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATgg > 2:208328/1‑91 (MQ=255) aacGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGt < 2:564451/91‑1 (MQ=255) aacGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGt < 2:3238077/91‑1 (MQ=255) aacGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑‑ATAGCGTATGGt < 1:1233793/91‑1 (MQ=255) aacGTTTTATAAAAGCAGTAAACCCGTACGACACGTGAGGTTGACTGCTTTTGTTTGTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGt < 2:1904011/91‑1 (MQ=37) acGTTTTATAAAAGCAGTAAACCCTTACGACACGTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGtt < 1:3238246/91‑1 (MQ=255) acGTTTTATAAAAGCAGTAAACCCTGACGACACTATAGGTTTACTGCTGTTGTTTTTTGTAAAAAGAAAACCATACGC‑ATA‑GCGTATGGtt < 2:2112082/91‑1 (MQ=38) cGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTc > 2:3095645/1‑91 (MQ=255) ttttATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGCATAT‑‑CGTATGGttttc < 1:3048579/91‑4 (MQ=38) ttttATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTCAg < 2:1691442/91‑1 (MQ=255) ttATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTCAGaa > 1:62019/1‑91 (MQ=255) ttATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑GAT‑GCGTATGGTTCAGaa > 1:3391733/1‑91 (MQ=255) ataAAAGCAGTAAACCCGTACGACACTGTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTCAGaaaa < 2:1066193/91‑1 (MQ=255) taAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTCAGAAAAg > 2:3416949/1‑91 (MQ=255) | CAACGTTTCGTTCTTGTTGGATTGGTCATTTTCAAATATTCCCCTTTTATATGCCCGTAAAAGACAATATACGTTATAACAACGTTTTATAAAAGCAGTAAACCCTTACGACACTTTAGGTTTACTGCTTTTGTTTTTTGTAAAAAGAAAACCATACGC‑TAT‑GCGTATGGTTCAGAAAAG > USA300TCH1516_ALE/1456858‑1457037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |