| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1619608 | 153 (0.750) | 9 (0.050) | 6/148 | NT | 5.3% | intergenic (+11/+94) | proC/rnz | Pyrroline‑5‑carboxylate reductase/Ribonuclease Z |
| ? | USA300TCH1516_ALE | = 1619646 | 181 (0.960) | intergenic (+49/+56) | proC/rnz | Pyrroline‑5‑carboxylate reductase/Ribonuclease Z | |||||
Only 100 of 235 total aligned reads displayed.
ATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTG > USA300TCH1516_ALE/1619518‑1619698 | aTTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCG < 2:1448003‑M1/91‑1 (MQ=255)aTTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCG < 1:131614‑M1/91‑1 (MQ=255)aTTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCG > 1:2647527‑M1/1‑91 (MQ=255)aTTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGACGACCGTAGTATTGAACTTTCTAATATAGAAGACCAAGAAAAACAAACCCG < 2:2320936‑M1/91‑1 (MQ=255) ttAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGcc < 1:515814/91‑1 (MQ=255) aGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCaa < 1:1524730/91‑1 (MQ=255) gTATCTATTTTCGAAGATTGTCTAAACGCTGCCATCGCCCGTAGTACTGAACTTTCTAACATAGAAGACCAATAAAAACAAACCCGCCAac > 1:3154563/1‑91 (MQ=255) tATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAaca < 1:877371/91‑1 (MQ=255) tCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAAcaca > 1:4160/1‑91 (MQ=255) tCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAAcaca > 1:3936727/1‑91 (MQ=255) tCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAAcaca > 2:2091461/1‑91 (MQ=255) tCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAAcaca < 1:2632772/91‑1 (MQ=255) cTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACAt > 1:1065803/1‑91 (MQ=255) tATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATg > 1:135928/1‑91 (MQ=255) tATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATg > 2:2643437/1‑91 (MQ=255) aTTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGt > 2:1958232/1‑91 (MQ=255) aTTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGt < 2:1555590/91‑1 (MQ=255) tttCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTAt > 2:3666143/1‑91 (MQ=255) tttCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTAt > 2:228441/1‑91 (MQ=255) tttCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTAt < 2:3756001/91‑1 (MQ=255) cGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGca < 1:235315/91‑1 (MQ=255) aaGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGcatc < 1:2408540/91‑1 (MQ=255) aGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGcatca < 1:3611602/91‑1 (MQ=255) aGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGcatca > 2:3175810/1‑91 (MQ=255) aGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGcatca > 1:2829546/1‑91 (MQ=255) gATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGcatcat > 1:806342/1‑91 (MQ=255) tCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCaa < 2:2401784/91‑1 (MQ=255) tCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCaa < 2:3818044/91‑1 (MQ=255) cTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAg > 1:969731/1‑91 (MQ=255) aaaCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCa > 2:1619700/1‑91 (MQ=255) aaCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCAc > 2:1525231/1‑91 (MQ=255) acacTGACGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACt < 2:1586546/88‑1 (MQ=255) aCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGtcaaacacagtgcttgcgatgatgcataca < 1:2257798‑M1/91‑31 (MQ=255) aCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACt > 1:2937690/1‑91 (MQ=255) aCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACt < 2:351634/91‑1 (MQ=255) cGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACtg < 1:306916/91‑1 (MQ=255) cGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACtg < 1:2173990/91‑1 (MQ=255) gCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACtgt < 2:3695263/91‑1 (MQ=255) ccGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGttt > 2:840808/1‑91 (MQ=255) ccGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGttt > 2:923417/1‑91 (MQ=255) cGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTg > 2:489435/1‑91 (MQ=255) cGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTg > 1:3307222/1‑91 (MQ=255) gTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGtcaaacacagtgcttgcgatgatgcatacatgtgttgg < 1:39971‑M1/91‑39 (MQ=255) gTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGa > 1:2288001/1‑91 (MQ=255) tCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGtcaaacacagtgcttgcgatgatgcatacatgtgttggc < 2:331419‑M1/91‑40 (MQ=255) tCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAc > 1:2419835‑M2/1‑90 (MQ=255) tCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAc > 2:816521‑M2/1‑90 (MQ=255) cGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcg > 2:766162‑M2/1‑89 (MQ=255) cGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcg > 2:1177468‑M2/1‑89 (MQ=255) cGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcg > 1:1302292‑M2/1‑89 (MQ=255) gACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcgg < 2:429192‑M2/91‑4 (MQ=255) gACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcgg > 2:3633730‑M2/1‑88 (MQ=255) aCCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcggg < 2:966475‑M2/91‑5 (MQ=255) ccGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcgggt < 1:2826297‑M2/91‑6 (MQ=255) tagtaTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAt > 2:305867/1‑91 (MQ=255) agtaTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAtt < 2:3349565/91‑1 (MQ=255) agtaTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAtt > 2:2316710/1‑91 (MQ=255) gtaTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAttt > 1:2489602/1‑91 (MQ=255) aTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTAttttt > 1:1248362/1‑91 (MQ=255) ttGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTta > 2:3550295/1‑91 (MQ=255) ttGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTta > 1:3606967/1‑91 (MQ=255) cTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAtt > 1:1704248/1‑91 (MQ=255) cTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAtt < 1:379916/91‑1 (MQ=255) tttCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAAttt > 1:1048683/1‑91 (MQ=255) ttCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTa < 1:374330/91‑1 (MQ=255) cTAAGATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTAtt < 2:3617848/91‑1 (MQ=255) aaTATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGt > 1:1296383/1‑91 (MQ=255) atatAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGtt > 1:354475/1‑91 (MQ=255) tataGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTa < 2:720563/91‑1 (MQ=255) ataGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTAt > 1:2799987/1‑91 (MQ=255) ataGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTAt > 2:1267886/1‑91 (MQ=255) taGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTAtt > 1:1163005/1‑91 (MQ=255) gaCCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCa > 1:480421/1‑91 (MQ=255) gaCCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCa < 2:1584357/91‑1 (MQ=255) gaCCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTAGAATTTATTGTTATTTGGCa < 2:1466669/91‑1 (MQ=255) aCCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCaa > 1:2027367/1‑91 (MQ=255) cAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGc < 2:311059/91‑1 (MQ=255) cAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGc < 2:3877722/91‑1 (MQ=255) aTAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCAt > 2:749016/1‑91 (MQ=255) aTAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCAt < 1:738777/91‑1 (MQ=255) aaaaCAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGt > 1:1737764/1‑91 (MQ=255) aaaaCAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGt > 1:2584963/1‑91 (MQ=255) aacaaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTCTAATTTATTGTTATTTGGCAAGCATTGttt > 2:858409/1‑91 (MQ=255) aacaaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGttt > 2:1166510/1‑91 (MQ=255) caaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcgggtttgtttttattggtcttctatattagaaagttcaatacta < 2:1826679‑M2/91‑46 (MQ=255) aaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGAcgggtttgtttttattggtcttctatattagaaagttcaatactac < 1:2289104‑M2/91‑47 (MQ=255) aaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTTTTATTTGGCAAGCATTGTttatt > 1:1925436/1‑91 (MQ=255) acCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTAc < 1:3349260/91‑1 (MQ=255) cccGtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattagaaagttcaatactacggt > 2:3381513‑M1/1‑4 (MQ=255) cccGtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattagaaagttcaatactacggt > 1:1333315‑M1/1‑4 (MQ=255) cccGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACt > 1:2879671/1‑91 (MQ=255) cccGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACt < 2:2900033/91‑1 (MQ=255) ccGtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattagaaagttcaatactacggtc > 2:3633679‑M1/1‑3 (MQ=255) ccGtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattagaaagttcaatactacggtc < 2:1447362‑M1/91‑89 (MQ=255) ccGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACtt > 2:2504843/1‑91 (MQ=255) cGtcaaacaccgtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattagaaagttcaatactacggtcg > 2:2237652‑M1/1‑2 (MQ=255) cGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACttt > 2:3280874/1‑91 (MQ=255) cGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACttt < 2:871327/91‑1 (MQ=255) gtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattcgaaagttcactactacggtcga > 2:3618177‑M1/1‑1 (MQ=255) gtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttattggtcttctatattagaaagttcaatactacggtcga > 1:2401546‑M1/1‑1 (MQ=255) | ATTTAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTG > USA300TCH1516_ALE/1619518‑1619698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |