| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 1702267 | 173 (0.850) | 11 (0.060) | 6/138 | NT | 6.9% | intergenic (‑11/+38) | comEA/tylM1 | ComE operon protein 1/dTDP‑3‑amino‑3,6‑dideoxy‑alpha‑D‑glucopyranose N,N‑dimethyltransferase |
| ? | USA300TCH1516_ALE | = 1702290 | 148 (0.840) | intergenic (‑34/+15) | comEA/tylM1 | ComE operon protein 1/dTDP‑3‑amino‑3,6‑dideoxy‑alpha‑D‑glucopyranose N,N‑dimethyltransferase | |||||
Only 100 of 283 total aligned reads displayed.
ATAATTAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTA > USA300TCH1516_ALE/1702177‑1702357 | ttgaaacatttactgattttaatatagatgaacataatgaagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCActc > 1:735312‑M1/81‑91 (MQ=255)aTAATTAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTC < 2:3154706‑M1/91‑1 (MQ=255) aTTAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTCTAGCGTAATAAAAATTGATACAATAAAACCActcctc < 2:2696439/91‑1 (MQ=255) aTTAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCActcctc < 1:1499097/91‑1 (MQ=255) ttAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCa < 2:2834248/91‑1 (MQ=255) tAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCaa < 1:2826105/91‑1 (MQ=255) aaaaCAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAAc > 1:2522733/1‑91 (MQ=255) aaaCAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACt > 2:2966112/1‑91 (MQ=255) aacaacAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACtt > 1:1057993/1‑91 (MQ=255) aacaacAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACtt > 1:3227406/1‑91 (MQ=255) caacaGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTta < 1:1928126/91‑1 (MQ=255) caGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATac < 1:1549977/91‑1 (MQ=255) caGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATac > 1:669561/1‑91 (MQ=255) caGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATac < 1:505840/91‑1 (MQ=255) aGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATaca < 2:2282293/91‑1 (MQ=255) aCTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGt > 1:9662/1‑91 (MQ=255) aCTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGt > 1:3108205/1‑91 (MQ=255) aCTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGt > 1:3461145/1‑91 (MQ=255) aCTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGt < 1:421420/91‑1 (MQ=255) cTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTc > 2:1636657/1‑91 (MQ=255) cTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTc > 1:3807816/1‑91 (MQ=255) cTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTc < 2:3742185/91‑1 (MQ=255) cTTAGAATATATAACTTCCATTGAGTTAAAAAAGCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTc < 1:3235285/91‑1 (MQ=255) aatatagatgaacataatgaagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTg > 2:1733636‑M1/61‑91 (MQ=255) aGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGa < 2:1098659/91‑1 (MQ=255) aGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGa < 2:2214286/91‑1 (MQ=255) atagatgaacataatgaagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTGAGc > 2:1828211‑M1/58‑91 (MQ=255) aaTATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGGTACAATGAAACCACTCCTCATCTTTATACACGTCTGAGc < 2:2490952/91‑1 (MQ=255) atatatAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCgctcagacgcgtataaagttgagg < 2:2249074‑M1/91‑25 (MQ=255) atatatAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCg > 1:2157084‑M2/1‑90 (MQ=255) atatatAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCg < 2:2348605‑M2/91‑2 (MQ=255) atatatAACTTCCACTGAATTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCGTTCgctcagacgcgtataaagttgagg < 2:2249286‑M1/91‑25 (MQ=255) atataACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCgctcagacgtgtataaagttgaggag < 1:668773‑M1/91‑27 (MQ=255) tataACTTCCATTGAGTTAACAAATCTTGATAGCACAATAAAAATTGATACAATAAAACCACTCgctcagacgtgtataaagttgaggagt < 2:1699749‑M1/91‑28 (MQ=255) tataACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCgctcagacgtgtataaagttgaggagt < 1:875448‑M1/91‑28 (MQ=255) ataACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCgagtg > 1:2319099‑M2/1‑86 (MQ=255) ataACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCgagtg < 2:3163737‑M2/91‑6 (MQ=255) ataACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCgagtg > 2:362542‑M2/1‑86 (MQ=255) ataACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCgagtg > 2:3801363‑M2/1‑86 (MQ=255) gaacataatgaagatgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTgg > 1:1806208‑M1/52‑91 (MQ=255) aaCTTCCATTGAGTTAAAAACTCTTTATAGCGTAATCAAAATTGATACAATAAAACCACCCCTCAACTTTACACACGCCTGAGCGAGTGGt > 2:99120/1‑91 (MQ=255) aCTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCgagtggtt < 2:260076‑M2/91‑9 (MQ=255) cTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCgctcagacgtgtataaagttgaggagtggttt < 1:1402867‑M1/91‑33 (MQ=255) cTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCgcgtggttt < 2:595257‑M2/91‑10 (MQ=255) ccATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTGTTAc < 2:3590979/91‑1 (MQ=255) aTTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACtt < 1:3771782/91‑1 (MQ=255) aTTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACtt < 1:3612871/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 2:1961123/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:1429604/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt > 2:2670599/1‑91 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:1768064/91‑1 (MQ=255) ttGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACttt < 1:2552696/91‑1 (MQ=255) tGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACtttt < 1:1756488/91‑1 (MQ=255) gAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTa < 2:565716/91‑1 (MQ=255) gTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtt > 2:3195212/1‑91 (MQ=255) gTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtt > 1:1396338/1‑91 (MQ=255) gTTAAAAAATCTTAATAGCGTAATATAAATTGATACAATAAAACTACACCTTAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtt > 2:1630363/1‑91 (MQ=255) ttAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAttt < 2:3899753/91‑1 (MQ=255) tgcagaaagattgtttttcattgcgaaaaaataaaagTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAttt > 2:2128368‑M1/38‑91 (MQ=255) tAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtttt < 2:2626930/91‑1 (MQ=255) tAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtttt > 2:252190/1‑91 (MQ=255) aaaaaaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAttttt > 2:79500/1‑91 (MQ=255) aaaaaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTAtttttt > 2:2440017/1‑91 (MQ=255) aaaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCg > 1:3838282/1‑91 (MQ=255) aaaTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCg < 1:1940863/91‑1 (MQ=255) aaTATTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGc < 1:3185008/91‑1 (MQ=255) aTCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCa > 2:3090499/1‑91 (MQ=255) tttATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCCATg > 2:2041468/1‑91 (MQ=255) ttATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGa > 1:1519553/1‑91 (MQ=255) tataGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaa > 2:2415430/1‑91 (MQ=255) tataGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaa > 1:2732055/1‑91 (MQ=255) tataGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaa > 1:2897347/1‑91 (MQ=255) tataGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCCGACCGAGTGGTTTTACTTTTCTTTTTTCGCCATGaa > 2:1283957/1‑91 (MQ=255) taGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGaaaa < 1:726880/91‑1 (MQ=255) gCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAAc < 2:1157734/91‑1 (MQ=255) taataaAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAAt > 1:3914400/1‑91 (MQ=255) taaAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCtt < 1:2267846/91‑1 (MQ=255) taaAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCtt < 1:1298315/91‑1 (MQ=255) aaaaaTTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCttt < 2:1003701/91‑1 (MQ=255) aaaaTTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTc < 1:3939211/91‑1 (MQ=255) aaaTTGATACAATAAAACCACTCCTCAACATTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTTTCAATTAAAAACAATCTTTCt > 2:3437182/1‑91 (MQ=255) atcgATACAATAGAACCTCTCCTCATCTTTAGACTCATCTGGGCGAGTGGTTTTACGTTTATTGTTTCGCAATGAAAAACAATCTTTCGGc < 2:3421792/88‑1 (MQ=255) aTTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGc < 2:48331/91‑1 (MQ=255) tGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCAt < 1:653197/91‑1 (MQ=255) gATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATc > 2:2421471/1‑91 (MQ=255) aCAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTc < 1:1186114/91‑1 (MQ=255) aaTAAAACCACTCCTCAACTTTATACACTTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCAt < 2:1925268/91‑1 (MQ=255) aaTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCAt < 2:719348/91‑1 (MQ=255) aTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCAtt < 2:1863682/91‑1 (MQ=255) aTAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCAtt < 1:2706577/91‑1 (MQ=255) tAAAACCACTCgctcagacgtgtataaagttgaggagtggttttattgtatcaatttttattacgctataaagattttttaactcaatgga < 2:1074558‑M1/91‑81 (MQ=255) AAAACCACTCCTCAACTTCATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTAt > 1:2192662‑M1/1‑91 (MQ=255) ACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGAAATAAAAAACAATCTTTCTGCATCTTCATTATGtt > 2:3367556‑M1/1‑91 (MQ=255) ccACTCgctcagacgtgtataaagttgaggagtggttttattgtatcaatttttattacgctataaagattttttaactcaatggaagtta < 1:2293400‑M1/91‑86 (MQ=255) CCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTc < 1:1028110‑M1/91‑1 (MQ=255) aCTCgctcagacgtgtataaagttgaggagtggttttattgtatcaatttttattacgctataaagattttttaactcaatggaagttata > 1:127092‑M1/1‑4 (MQ=255) ctcctcAACTTTATACACGTCTGAGCgagtggttttattgtatcaatttttattacgctataaagattttttaactcaatggaagttatat < 2:882214‑M2/91‑66 (MQ=255) tcctcAACTTTATACACGTCTGAGCgagtggttttattgtatcaatttttattacgctataaagattttttaactcaatggaagttatata < 2:1931894‑M2/91‑67 (MQ=255) TCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCt > 2:2417482‑M1/1‑91 (MQ=255) CCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTa > 2:3575213‑M1/1‑91 (MQ=255) | ATAATTAAAACAACAGCACTTAGAATATATAACTTCCATTGAGTTAAAAAATCTTTATAGCGTAATAAAAATTGATACAATAAAACCACTCCTCAACTTTATACACGTCTGAGCGAGTGGTTTTACTTTTATTTTTTCGCAATGAAAAACAATCTTTCTGCATCTTCATTATGTTCATCTA > USA300TCH1516_ALE/1702177‑1702357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |