| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 1970888 = | 209 (1.030) | 25 (0.140) | 13/142 | NT | 11.6% | intergenic (+77/‑656) | USA300HOU_RS09825/USA300HOU_RS09830 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | 1970925 = | 197 (1.090) | intergenic (+114/‑619) | USA300HOU_RS09825/USA300HOU_RS09830 | hypothetical protein/hypothetical protein | |||||
Only 100 of 372 total aligned reads displayed.
AAATTTCTAAGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTG > USA300TCH1516_ALE/1970798‑1970978 | tttCTAAGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGA > 2:2085289‑M1/1‑91 (MQ=255) aattcataaatatgatttaagcgaaaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaagaga > 1:569046‑M1/88‑91 (MQ=255) aattcataaatatgatttaagcgaaaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaagaga > 2:1904773‑M1/88‑91 (MQ=255) ttCTAAGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGAT > 2:1026521‑M1/1‑91 (MQ=255) attcataaatatgatttaagcgaaaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaagagaa < 2:3929781‑M1/5‑2 (MQ=255) cTAAGTAGCAGGTTACGTTCTCGATCACAACTCTTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGCTGA > 1:1414728‑M1/1‑91 (MQ=255) ataaatatgatttaagcgaaaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACa < 1:1709947‑M1/9‑1 (MQ=255) aaGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACA < 1:3447853‑M1/91‑1 (MQ=255) aaGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACA > 2:3896861‑M1/1‑91 (MQ=255) aaGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACA > 2:2025856‑M1/1‑91 (MQ=255) aaGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACA < 1:770374‑M1/91‑1 (MQ=255) aGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACAt > 1:2709275/1‑91 (MQ=255) aGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACAt > 1:2791224/1‑91 (MQ=255) aGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACAt > 1:127912/1‑91 (MQ=255) aGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACAt < 1:3564993/91‑1 (MQ=255) gTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACAtt < 2:240942/91‑1 (MQ=255) atatgatttaagcgaaaatcactacaaacaatgtcttcctataatttgtaaacataatttcatttgagttttaaaaaaGAGAtgacacgaa < 2:2739712‑M1/13‑5 (MQ=255) gCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGa > 2:1634245/1‑91 (MQ=255) ggTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAAt > 1:319408/1‑91 (MQ=255) tACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAg < 1:241549/91‑1 (MQ=255) tACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAg < 1:294570/91‑1 (MQ=255) aCGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGa > 1:2115613/1‑91 (MQ=255) cGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGat < 2:1278910/91‑1 (MQ=255) gTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGata > 2:3110217/1‑91 (MQ=255) gcgaaaatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACA‑‑AGAAATTAGATAttt > 1:2564577‑M1/68‑91 (MQ=255) tctcGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATAtt > 1:3898811/1‑91 (MQ=255) tcGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGCTGACATTAGAAATTAGATATTTc > 2:3022626/1‑91 (MQ=255) tcGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTc > 2:3083018/1‑91 (MQ=255) aatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCtt > 1:2486369‑M1/63‑91 (MQ=255) aatcactacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCtt > 2:1165822‑M1/63‑91 (MQ=255) aTCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtg < 2:2576264‑M2/91‑3 (MQ=255) tcactacaaacaatgtcttcctatagcttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGt > 2:3418379‑M1/61‑91 (MQ=255) tCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgt > 1:1849702‑M2/1‑88 (MQ=255) tCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgt > 2:282736‑M2/1‑88 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc > 2:2006323‑M2/1‑87 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc > 2:2305684‑M2/1‑87 (MQ=255) cacaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtc > 2:2941758‑M2/1‑87 (MQ=255) actacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCa > 2:1582701‑M1/59‑91 (MQ=255) actacaaacaatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCa > 2:875421‑M1/59‑91 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACAagaaatatctaatttctaatgtca < 2:3070262‑M1/91‑25 (MQ=255) acaACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtca > 1:1776749‑M2/1‑86 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGGTATTTCTtgtcat > 2:1848139‑M2/1‑85 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcat > 1:730871‑M2/1‑85 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcat < 2:411232‑M2/91‑7 (MQ=255) caACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcat > 2:2510578‑M2/1‑85 (MQ=255) aaCTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatc < 2:1744155‑M2/91‑8 (MQ=255) aCTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatct > 2:3704400‑M2/1‑83 (MQ=255) aCTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTtgtcatct > 1:1914621‑M2/1‑83 (MQ=255) cTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAAGAAACGAGATGACCTTAGAAATTAGATATTTCTtgtcatctc < 2:3758489‑M2/91‑10 (MQ=255) tATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATctct < 2:350474/91‑1 (MQ=255) tATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATctct > 2:3562571/1‑91 (MQ=255) tATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATctct < 1:1667042/91‑1 (MQ=255) ttttATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCtttt < 2:2885351/91‑1 (MQ=255) caatgtcttcctataatttgtaaacataagttcatttgagttttaaaaaaGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCtttt > 1:1221008‑M1/51‑91 (MQ=255) tttATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCttttt > 1:3357303/1‑91 (MQ=255) tattaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTa < 1:897098/91‑1 (MQ=255) attaGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaa < 2:3170856/91‑1 (MQ=255) taGTAACAGCATATTTATTTTTTAAAATTAAATCCCACATAAACGACATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTaaaa > 1:3152978/1‑91 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt > 1:3903980/1‑91 (MQ=255) gTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACt < 2:3274092/91‑1 (MQ=255) tAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTc > 1:598126/1‑91 (MQ=255) aGCATATTTCTTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAAt < 1:3783482/91‑1 (MQ=255) gCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATg > 1:2189449/1‑91 (MQ=255) gCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTCGTCATCTCTTTTTTAAAACTCAAATg < 2:2236492/91‑1 (MQ=255) atatTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGATATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGaa > 1:1693521/1‑91 (MQ=255) atatTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGaa < 1:2650264/91‑1 (MQ=255) atatTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGaa > 2:1695164/1‑91 (MQ=255) tatttattTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTTAAATGAAc > 2:3165292/1‑91 (MQ=255) tatttattTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAAc > 1:3247271/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt > 2:2174112/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt > 1:3109269/1‑91 (MQ=255) atttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACt < 2:2657457/91‑1 (MQ=255) tttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACtt > 2:2218564/1‑91 (MQ=255) tttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACtt > 2:2218865/1‑91 (MQ=255) ttatttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTa > 1:1371157/1‑91 (MQ=255) atttTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATg > 1:33772/1‑91 (MQ=255) ttttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGt > 1:3615461/1‑91 (MQ=255) tttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGtt < 1:1923098/91‑1 (MQ=255) ttttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGttt < 2:518420/91‑1 (MQ=255) ttAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTAc < 2:2779218/91‑1 (MQ=255) aaaaTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACaa < 2:674063/91‑1 (MQ=255) aTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAAtt > 1:812243/1‑91 (MQ=255) aTTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAAtt > 1:3737248/1‑91 (MQ=255) tAAATACCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATtat < 2:144761/91‑1 (MQ=255) aaaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATtata > 2:1225786/1‑91 (MQ=255) aaaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATtata > 1:47010/1‑91 (MQ=255) aaaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATtata > 1:1596930/1‑91 (MQ=255) aaTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAg > 2:59954/1‑91 (MQ=255) aTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAgg < 2:2613289/91‑1 (MQ=255) aTGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAgg > 2:1794239/1‑91 (MQ=255) gCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGaa > 2:3751664/1‑91 (MQ=255) ccAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAg < 1:1515124/91‑1 (MQ=255) cAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGa < 1:1113440/91‑1 (MQ=255) aaTAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACa < 2:3621259/91‑1 (MQ=255) aTAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAt < 1:1065938/91‑1 (MQ=255) aaCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgt > 1:1721119/1‑91 (MQ=255) aaCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACGCAAATGAACTTATGGTTACAAATTATAGGAAGACAttgt < 2:800947/91‑1 (MQ=255) aCGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtt < 1:1498909/91‑1 (MQ=255) cGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgttt > 1:3021496/1‑91 (MQ=255) GAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACAttgtttg < 1:2914516‑M1/91‑1 (MQ=255) | AAATTTCTAAGTAGCAGGTTACGTTCTCGATCACAACTATTTTTATTAGTAACAGCATATTTATTTTTTAAAATTAAATGCCAAATAAACGAGATGACATTAGAAATTAGATATTTCTTGTCATCTCTTTTTTAAAACTCAAATGAACTTATGTTTACAAATTATAGGAAGACATTGTTTG > USA300TCH1516_ALE/1970798‑1970978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |