| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2057471 | 172 (0.840) | 14 (0.080) | 7/132 | NT | 7.7% | intergenic (+228/+64) | USA300HOU_RS10370/USA300HOU_RS10375 | hypothetical protein/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2057483 | 196 (1.170) | intergenic (+240/+52) | USA300HOU_RS10370/USA300HOU_RS10375 | hypothetical protein/hypothetical protein | |||||
Only 100 of 312 total aligned reads displayed.
CCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACAAAAAC > USA300TCH1516_ALE/2057381‑2057561 | CCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGt > 2:1315502‑M1/1‑91 (MQ=255) CCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTa < 2:427413‑M1/91‑1 (MQ=255) cagcaagctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaa > 2:453788‑M2/33‑91 (MQ=255) AGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTaaa < 1:49852‑M1/91‑1 (MQ=255) ATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAAtt < 2:1481262‑M1/91‑1 (MQ=255) agctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTa > 2:2491337‑M2/28‑91 (MQ=255) agctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTa > 2:3801793‑M2/28‑91 (MQ=255) gctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc > 1:3716767‑M2/27‑91 (MQ=255) gctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc > 1:2849231‑M2/27‑91 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATGCAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:1402424/91‑1 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 1:3628810/91‑1 (MQ=255) atGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTAc < 2:2182989/91‑1 (MQ=255) ctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt > 1:3835395‑M2/26‑91 (MQ=255) ctatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACt > 1:1637788‑M2/26‑91 (MQ=255) tatataaagcatatgctgggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTc > 1:2981708‑M2/25‑91 (MQ=255) gCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTc > 2:3078731/1‑91 (MQ=255) tatataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAac > 2:2081118‑M2/1‑89 (MQ=255) tatataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAac > 2:51020‑M2/1‑89 (MQ=255) tatataGCGTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttac < 2:747182‑M1/91‑15 (MQ=255) atataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttact < 1:1498445‑M1/91‑16 (MQ=255) tataGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactt < 1:156329‑M2/91‑5 (MQ=255) taGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttg > 2:2771282‑M2/1‑85 (MQ=255) gCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaa < 1:3188999‑M1/91‑21 (MQ=255) gCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaa > 1:1106384‑M2/1‑83 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaat < 1:1589130‑M2/91‑10 (MQ=255) cTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAactttgaat > 2:1234328‑M2/1‑82 (MQ=255) ttGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTttgagtaattttactttgaata < 1:3267969‑M1/91‑23 (MQ=255) gggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCtt > 1:2104929‑M2/8‑91 (MQ=255) ggggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCttt > 1:501480‑M2/7‑91 (MQ=255) ggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc < 2:2732063‑M2/87‑1 (MQ=255) ggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc > 1:1932579‑M2/5‑91 (MQ=255) ggttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTcc < 2:2991518‑M2/87‑1 (MQ=255) gttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCct < 1:709379‑M2/88‑1 (MQ=255) ttTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCctc > 1:1535516‑M2/3‑91 (MQ=255) tTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCctct > 1:2706856‑M2/2‑91 (MQ=255) tctcATACAATATGGATCGAGCATCTTGCATGTATAAACAAATATGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCtt < 2:3545314/91‑1 (MQ=255) ctcATACAATATGGATCGAGCATCCTGCATGTATCAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATCGCCTTTCCTCTTc > 2:1286142/1‑91 (MQ=255) tcATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCa < 2:3489202/91‑1 (MQ=255) cATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCaa > 1:197703/1‑91 (MQ=255) tACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAAt < 1:2567516/91‑1 (MQ=255) cAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAg > 1:3474547/1‑91 (MQ=255) atatGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTc < 1:3540656/91‑1 (MQ=255) tatGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCt > 1:3672181/1‑91 (MQ=255) atGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtt > 2:136562/1‑91 (MQ=255) tGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCttt < 2:1034215/91‑1 (MQ=255) aTCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttatt < 1:441532/91‑1 (MQ=255) tCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttattt > 1:950182/1‑91 (MQ=255) tCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttattt > 2:1641844/1‑91 (MQ=255) tCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCtttattt < 1:892837/91‑1 (MQ=255) aGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTaaa < 1:3806050/91‑1 (MQ=255) gCATCTTGCATGTATAAACTAATAGGCTAGTCAAAGTACAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAAt > 2:3449234/1‑91 (MQ=255) gCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAAt < 2:2522253/91‑1 (MQ=255) cATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAAtt < 2:3955968/91‑1 (MQ=255) cATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAAtt > 2:2273836/1‑91 (MQ=255) aTCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAACAGTCTTTATTTAAATTg > 1:3390175/1‑91 (MQ=255) tCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTgg > 2:83101/1‑91 (MQ=255) cTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGa > 2:2043597/1‑91 (MQ=255) ttGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGAt < 2:3289464/91‑1 (MQ=255) ttGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGAt < 1:2853519/91‑1 (MQ=255) gCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTa > 2:318900/1‑91 (MQ=255) cATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTAt > 1:2206498/1‑91 (MQ=255) cATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTAt < 2:584592/91‑1 (MQ=255) tGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGt < 1:431234/91‑1 (MQ=255) tGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGt < 1:3350356/91‑1 (MQ=255) tGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGt < 1:2287599/91‑1 (MQ=255) tGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGt < 2:311331/91‑1 (MQ=255) ataAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAt > 2:871174/1‑91 (MQ=255) ataAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAt < 2:2863044/91‑1 (MQ=255) taAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTAtt < 1:2373780/91‑1 (MQ=255) aaCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTgg < 1:126061/91‑1 (MQ=255) aaCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTgg > 1:3826109/1‑91 (MQ=255) aCAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGa > 1:85181/1‑91 (MQ=255) cAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTGCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGAt > 1:3135842/1‑91 (MQ=255) aaTAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGAttt > 1:585743/1‑91 (MQ=255) tAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTc < 2:1541500/91‑1 (MQ=255) tAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTc > 2:54277/1‑91 (MQ=255) tAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTc > 1:761364/1‑91 (MQ=255) aGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCt > 1:1861824/1‑91 (MQ=255) ggCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCTTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCtt > 1:1141177/1‑91 (MQ=255) gCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTa < 2:2605139/91‑1 (MQ=255) aTTCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaag > 2:1570484‑M1/1‑9 (MQ=255) aTTCAAAGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaag < 2:1112542‑M2/91‑71 (MQ=255) aTTCAAAGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaag < 1:435628‑M2/91‑71 (MQ=255) aTTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCt > 1:1035234/1‑91 (MQ=255) ttCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagc > 1:3918799‑M1/1‑8 (MQ=255) ttCAAAGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagc > 2:1767694‑M1/1‑8 (MQ=255) ttCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTa < 1:1280195/91‑1 (MQ=255) tCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTAc < 1:137186/91‑1 (MQ=255) tCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTAc > 2:1208664/1‑91 (MQ=255) aaaGTttgagtaattttactttgaatagcctatttgtttatacatgcaagatgttcgatccatattgtatgagaaacccccagcaagctat < 1:3323593‑M1/91‑87 (MQ=255) aaaGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACaa > 1:2803708/1‑91 (MQ=255) aaaGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACaa > 1:1487544/1‑91 (MQ=255) aGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctatat < 1:888507‑M2/91‑77 (MQ=255) aGTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctatat < 1:912492‑M2/91‑77 (MQ=255) aGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACaaaa > 1:3101252/1‑91 (MQ=255) gTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctatata < 1:902504‑M2/91‑78 (MQ=255) gTAAAATTACTCAAactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctatata < 2:1843988‑M2/91‑78 (MQ=255) gTAAAATTACTCAAaatttgaatagcctatttgtttatacatgcaagatgctcgatccgtattgtatgagaaacccccagcaagctatata < 1:3363062‑M2/91‑78 (MQ=255) gTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACaaaaa < 2:3310824/91‑1 (MQ=255) tttgagtaattttactttgaatagcctatttgtttatacatgcaagatgctcgatccatattgtatgagaaacccccagcaagctatataa > 2:1444785‑M1/1‑1 (MQ=255) | CCCAGCATATGCTTTATATAGCTTGCTGGGGGTTTCTCATACAATATGGATCGAGCATCTTGCATGTATAAACAAATAGGCTATTCAAAGTAAAATTACTCAAACTTTGAATAGCCTTTCCTCTTCAAATAGTCTTTATTTAAATTGGATTATGTTATTGGATTTTCTTACCTACAAAAAC > USA300TCH1516_ALE/2057381‑2057561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |