| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2218211 = | 156 (0.770) | 13 (0.080) | 8/124 | NT | 9.2% | intergenic (+4/+55) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | 2218261 = | 135 (0.860) | intergenic (+54/+5) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 310 total aligned reads displayed.
GGATTATCTGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACA > USA300TCH1516_ALE/2218121‑2218301 | aggtaaaggtaatgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaa > 1:2498301‑M1/91‑91 (MQ=255) ggtaaaggtaatgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaaa > 1:307628‑M1/90‑91 (MQ=255) gtaaaggtaatgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaaaa < 2:3342211‑M1/3‑1 (MQ=255) aTTATCTGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAA > 2:1088350‑M1/1‑91 (MQ=255) cctaggtaatgctaaagcttctgtcgatggtcaacttgcttgtagttgtgaacttacatttgcacttcaagatgtaaaataaaacaaaaaa < 2:1760457‑M1/4‑1 (MQ=255) aaggtaatgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaaaaaaa > 2:923358‑M1/86‑91 (MQ=255) tGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACAT > 1:1517183‑M1/1‑91 (MQ=255) tGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACAT > 1:2943642‑M1/1‑91 (MQ=255) tGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACAT > 2:3937388‑M1/1‑91 (MQ=255) tGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACAT > 1:2007717‑M1/1‑91 (MQ=255) ggTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATT > 2:2014642‑M1/1‑91 (MQ=255) gTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTC > 2:3378867‑M1/1‑91 (MQ=255) tGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCA > 1:28037‑M1/1‑91 (MQ=255) atgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCa < 1:1000520‑M1/12‑1 (MQ=255) atgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCa < 2:2144669‑M1/12‑1 (MQ=255) atgctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCa < 2:285013‑M1/12‑1 (MQ=255) gaagaaTTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAA < 2:2267959‑M1/91‑1 (MQ=255) gctaaagctactgtcgatggtcaacttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAA‑CATTCAAAg < 1:1793248‑M1/14‑1 (MQ=255) aaatTAAAAAAATCATTTAATAGAATGATGCAGTCTAAACCAAAGAAAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGA < 2:1852786‑M1/90‑1 (MQ=255) aaaaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGc > 2:1192331/1‑91 (MQ=255) aaaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGcc > 2:3242016/1‑91 (MQ=255) tCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAacac < 2:2995281/91‑1 (MQ=255) tCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAacac > 2:1555460/1‑91 (MQ=255) aTTTAATCGAATGATGTAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt > 2:60276/1‑91 (MQ=255) aTTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt < 1:623068/91‑1 (MQ=255) aTTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt < 1:3472179/91‑1 (MQ=255) aTTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt > 1:3434049/1‑91 (MQ=255) ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa > 1:33782/1‑91 (MQ=255) tAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTtaatgtgttggcata < 1:1551282‑M1/91‑16 (MQ=255) tAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAa < 1:3274356‑M2/91‑2 (MQ=255) aaTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTtaatgtgttggcataa < 1:3534326‑M1/91‑17 (MQ=255) aaTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaa > 1:2674582‑M2/1‑89 (MQ=255) aaTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaa < 1:2316920‑M2/91‑3 (MQ=255) cGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatct > 2:3616171‑M2/1‑86 (MQ=255) acttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCt > 1:1288616‑M1/55‑91 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 1:340313‑M2/91‑9 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTtaatgtgttggcataatctttga < 2:2747266‑M1/91‑24 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGCAAAATAAAAAACATTCAAAGATTtaatgtgttggcataatctttga < 2:3552137‑M1/91‑24 (MQ=255) gcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGa > 1:1657819‑M1/51‑91 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg > 1:708356‑M2/1‑79 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt > 2:752061‑M2/1‑78 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt > 2:2670709‑M2/1‑78 (MQ=255) tagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtt > 2:2721219‑M1/46‑91 (MQ=255) cAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtt > 2:65655‑M2/1‑77 (MQ=255) aGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTtaatgtgttggcataatctttgaatgttt < 2:715325‑M1/91‑30 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 1:187815‑M2/91‑17 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 1:3227008‑M2/91‑17 (MQ=255) gTCTAAACCAAAGTAAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 2:3724091‑M2/91‑17 (MQ=255) cTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttttt < 1:1944662‑M2/91‑19 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtttttttt < 2:245321/91‑1 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtttttttt < 2:2882547/91‑1 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGtttttttgt < 1:2451254/91‑3 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTg > 2:571037/1‑91 (MQ=255) ccAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGttttttttttt > 2:1500550/1‑88 (MQ=255) ccAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGtt < 1:427210/91‑1 (MQ=255) cAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttt > 2:2576535/1‑91 (MQ=255) aaaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGtttt < 1:2974676/91‑1 (MQ=255) aaGTTAATGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGtttta < 1:1961574/91‑1 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGtttta > 1:3652871/1‑91 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCTAACACATTAAATCTTTGAATGTTTTTTTTGttttatt < 1:3328505/91‑1 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttatt < 1:1434272/91‑1 (MQ=255) tAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttatttt > 2:2955952/1‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCATAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttattttt > 2:3829273/1‑90 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGttttatttta > 2:3820010/1‑91 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTAc > 2:1389516/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTTTTTTATTTTACa > 2:2466724/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGAAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTTTTTTACa > 2:2110515/1‑91 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACAt < 1:2223627/91‑1 (MQ=255) gATGAAAACATAGAAGACTAACACAACAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATc < 2:2561030/91‑1 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATc < 2:1981747/91‑1 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATc > 1:907617/1‑91 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATc < 2:3058793/91‑1 (MQ=255) gAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTg < 1:2756454/91‑1 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGa < 1:863107/91‑1 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGa < 1:1158023/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGaa < 1:3910045/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGaa > 2:506312/1‑91 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGaa < 1:1030404/91‑1 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAAtt < 1:2146817/91‑1 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGc > 2:1912550/1‑91 (MQ=255) agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaa > 2:1248737/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 2:1620963/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 2:1316745/1‑91 (MQ=255) aaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 2:3095832‑M1/13‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTTTTTTATTTTACATTTTTAATTGCAAAt > 2:476531/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt > 1:3009884/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 2:2200810/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg < 1:581317/91‑1 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 1:1679716/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 1:1365370/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg < 1:541841/91‑1 (MQ=255) gagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGt > 1:3818001/1‑91 (MQ=255) agTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTa > 2:1016512/1‑91 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg < 1:2247455/91‑1 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 2:798546/91‑1 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 2:1721041/91‑1 (MQ=255) aataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTc > 1:1583373/1‑91 (MQ=255) aaaaaaCATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttag < 1:940643‑M2/91‑60 (MQ=255) aaaaaaCATTCAAAGATTATGCCAACACATNAaatctttgaatgtnttttattttacncttcnaatttttcatcctttaactttggtttag < 1:1690550‑M2/91‑60 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca < 2:2366387‑M1/91‑1 (MQ=255) | GGATTATCTGGTGAAGAATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATGTTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACA > USA300TCH1516_ALE/2218121‑2218301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |