| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2218211 = | 156 (0.770) | 13 (0.080) | 8/124 | NT | 9.2% | intergenic (+4/+55) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | 2218261 = | 135 (0.860) | intergenic (+54/+5) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 272 total aligned reads displayed.
AAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCTA > USA300TCH1516_ALE/2218172‑2218351 | aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tttttttgt < 1:2451254/91‑3 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TCTTTTTTg > 1:1957332/1‑91 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGt < 2:2861730/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGt < 1:2805130/91‑1 (MQ=255) ccAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑ttttttttttt > 2:1500550/1‑88 (MQ=255) ccAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtt > 2:2212565/1‑91 (MQ=255) ccAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtt > 1:1526284/1‑91 (MQ=255) aaaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttt < 1:2974676/91‑1 (MQ=255) aaaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttt > 2:361847/1‑91 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttta > 1:3652871/1‑91 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatt < 1:3466111/91‑1 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTGTGttttatt < 2:673501/91‑1 (MQ=255) ttAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTttttattt > 2:1847589/1‑91 (MQ=255) tAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttt > 2:2955952/1‑91 (MQ=255) tttgcaattcaagatgtaaaataaaacaaaaaaaacattcaaagatttaatgtgttggcataatctttgaatgttttttTTGttttatttt > 2:3095832‑M2/80‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta > 2:3820295/1‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta < 1:858450/91‑1 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAAAT‑AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACa < 2:3697105/91‑1 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACa > 2:1756992/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACa > 2:2466668/1‑91 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACAt < 1:2223657/91‑1 (MQ=255) ggATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACAt < 2:3880842/91‑1 (MQ=255) gATGAAAACATAGAAGACTAACACAACAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc < 2:2561030/91‑1 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc < 2:1981747/91‑1 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc < 2:3058793/91‑1 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc > 1:907617/1‑91 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc > 2:1991659/1‑91 (MQ=255) aaTGAAAAATTATAAGAATAAAAGAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc < 1:3314846/90‑1 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGa < 2:1898746/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa > 1:269853/1‑91 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa > 2:506312/1‑91 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa < 2:2745323/91‑1 (MQ=255) aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAt > 2:2450542/1‑91 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAtt < 1:2146817/91‑1 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGc < 2:1599628/91‑1 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTTCaaa > 2:596992/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 2:1316987/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTTTTTATTTTACATTTTTAATTGCAAAt > 2:476531/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt > 2:770944/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 1:1365370/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 2:2199392/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg < 2:1262857/91‑1 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg < 1:541841/91‑1 (MQ=255) gagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGt > 1:3818001/1‑91 (MQ=255) gTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTaa < 2:1374716/91‑1 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATATTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg > 1:3424696/1‑91 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 1:913500/91‑1 (MQ=255) taaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcac < 2:3142193/91‑1 (MQ=255) AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAAc < 1:3007891‑M1/91‑1 (MQ=255) AAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt > 2:2055642‑M1/1‑91 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTTCATCTTGAATTGCACATTTATGTTCACAacttc < 2:1925320‑M1/91‑3 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc > 2:1563831‑M1/1‑91 (MQ=255) CATTCAAAGATTATGCCAACACATTAAATCTTTGAATGATTTTTTTTGTTTTATTTTACATATTAAATTTCAAATTTAAATtcacaaatat < 2:3805781‑M1/91‑5 (MQ=255) CATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAca > 1:3096858‑M1/1‑91 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 1:3178507‑M1/1‑91 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 2:3842822‑M1/1‑91 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 2:3074403‑M1/1‑91 (MQ=255) ttcaaagattttatgtgttggcataatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag > 2:1012201‑M2/43‑91 (MQ=255) ttcaaagatttaatgtgttggcataatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAATTTCACAACTAcaag > 2:2295416‑M2/43‑91 (MQ=255) ttcaaagatttaatgtgttggcataatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag > 1:2475930‑M2/43‑91 (MQ=255) TCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagc < 1:1082322‑M1/91‑1 (MQ=255) tcaaagatttaatgtgttggcataatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagc > 1:1657819‑M2/42‑91 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa > 1:2214823‑M1/1‑91 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTACGTTCACAACTacaagcaat < 2:3578153‑M1/91‑2 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag > 1:1192490‑M1/1‑91 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag < 1:1874018‑M1/91‑1 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAACTGTAAGTTCACAACTACAAGCAAGt < 1:3671035‑M1/91‑1 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGt < 2:1111972‑M1/91‑1 (MQ=255) agatttaatgtgttggcataatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGt > 1:1288616‑M2/38‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:2480417‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:929704‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3336666‑M1/1‑91 (MQ=255) gatttaatgtgttggcataatctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3236805‑M2/37‑91 (MQ=255) tGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCa > 2:1703359/1‑91 (MQ=255) gCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt < 2:68858/91‑1 (MQ=255) aaCACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGa < 1:819288/91‑1 (MQ=255) cacaTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACa < 2:1105260/91‑1 (MQ=255) acaTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAg > 2:1236975/1‑91 (MQ=255) acaTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAg < 1:608355/91‑1 (MQ=255) caTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt < 1:2592688/91‑1 (MQ=255) caTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt < 2:3375549/91‑1 (MQ=255) tAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGc < 1:1621682/91‑1 (MQ=255) aaaTCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCt > 1:3950775/1‑91 (MQ=255) aaaTCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCt > 1:1965524/1‑91 (MQ=255) aaaTCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCt < 1:770053/91‑1 (MQ=255) atctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCttt > 1:3603028‑M2/18‑91 (MQ=255) tctttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTa > 1:224923‑M2/17‑91 (MQ=255) ttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCa > 1:1682049‑M2/14‑91 (MQ=255) ttgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCa > 1:1311425‑M2/14‑91 (MQ=255) tgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 2:285013‑M2/79‑1 (MQ=255) tgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 1:1000520‑M2/79‑1 (MQ=255) tgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 2:2536191‑M2/79‑1 (MQ=255) tgaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAt < 2:2144669‑M2/79‑1 (MQ=255) gaatgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAtt < 2:963362‑M2/80‑1 (MQ=255) tgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacc < 2:53579‑M2/83‑1 (MQ=255) tgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacc < 2:2656753‑M2/83‑1 (MQ=255) tgttttttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacc < 2:920694‑M2/83‑1 (MQ=255) tttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttac < 2:3342211‑M2/88‑1 (MQ=255) ttTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCAttacctttacc > 1:307628‑M2/3‑91 (MQ=255) ttGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCTa > 2:2112041/1‑91 (MQ=255) | AAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCTTTAGCATTACCTTTACCTA > USA300TCH1516_ALE/2218172‑2218351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |