| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2218228 | 156 (0.770) | 14 (0.090) | 10/124 | NT | 9.9% | intergenic (+21/+38) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | = 2218242 | 135 (0.860) | intergenic (+35/+24) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 348 total aligned reads displayed.
ATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAC > USA300TCH1516_ALE/2218138‑2218318 | aTTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATT > 1:1139320‑M1/1‑91 (MQ=255) aaaaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGc > 2:1192331/1‑91 (MQ=255) aaagaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTtaatg < 1:3112673‑M1/91‑6 (MQ=255) aaaaaTCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGcc > 2:3242016/1‑91 (MQ=255) tCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAacac > 2:1555460/1‑91 (MQ=255) aTTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt < 1:623068/91‑1 (MQ=255) aTTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt < 1:1467770/91‑1 (MQ=255) aTTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAt > 1:1994068/1‑91 (MQ=255) tttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACAtt > 2:2572427/1‑91 (MQ=255) ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa < 1:1565172/91‑1 (MQ=255) ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa > 1:1842127/1‑91 (MQ=255) aaTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaa > 1:2674582‑M2/1‑89 (MQ=255) aTCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGACGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaat < 1:3140537‑M2/91‑4 (MQ=255) cGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatct > 2:3616171‑M2/1‑86 (MQ=255) ttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCttt > 1:1672841‑M1/53‑91 (MQ=255) aaTGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTtaatgtgttggcataatcttt < 1:582361‑M1/91‑22 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 1:340271‑M2/91‑9 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 1:1013810‑M2/91‑9 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGCAAAATAAAAAACATTCAAAGATTtaatgtgttggcataatctttga < 2:3552137‑M1/91‑24 (MQ=255) gatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaa < 1:386617‑M2/91‑11 (MQ=255) cttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGaa > 1:3001577‑M1/50‑91 (MQ=255) cttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATAAAATCTTTGaa > 2:1012201‑M1/50‑91 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg < 1:245284‑M2/91‑13 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg < 2:1835594‑M2/91‑13 (MQ=255) gtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑t > 1:3484940‑M1/47‑91 (MQ=255) gCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgt > 2:752061‑M2/1‑78 (MQ=255) tagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tt > 2:2721219‑M1/46‑91 (MQ=255) cAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAGACATTCAAAGATTtaatgtgttggcataatctttgaatgtt < 2:3006361‑M1/91‑29 (MQ=255) gactaGACCAAAGATAAAGGATAAAAAAATAGAAAAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt > 2:2949852‑M2/3‑75 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 1:187815‑M2/91‑17 (MQ=255) cTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttttt < 1:1944662‑M2/91‑19 (MQ=255) cTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttttt < 1:29446‑M2/91‑19 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tttttttt < 2:245321/91‑1 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tttttttt < 2:2882547/91‑1 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTg < 1:1752605/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGt < 1:2437390/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGt < 1:2805130/91‑1 (MQ=255) ccAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtt < 1:427210/91‑1 (MQ=255) cAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttt > 1:68464/1‑91 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttta > 1:3717844/1‑91 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttta > 1:3652871/1‑91 (MQ=255) aGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttat > 2:3113703/1‑91 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatt < 2:3874705/91‑1 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatt < 2:3065728/91‑1 (MQ=255) aaaGGGTGAAAGAGTAGAAGAGTAAGATAAAGAGCGTTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta < 2:213946/91‑1 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta > 2:3820295/1‑91 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta < 1:858450/91‑1 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTAc > 2:1389516/1‑91 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAAAT‑AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACa < 2:3697105/91‑1 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTTTTTATTTTACa > 2:2466724/1‑91 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc > 1:907617/1‑91 (MQ=255) aaTGAAAAATTATAAGAATAAAAGAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc < 1:3314846/90‑1 (MQ=255) gAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTg > 2:1714221/1‑91 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa < 1:3910045/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa > 2:506312/1‑91 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAtt < 1:2146791/91‑1 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGc < 2:1599628/91‑1 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTCTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGc > 2:622134/1‑91 (MQ=255) agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCaa > 2:1248737/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTTCaaa > 2:596992/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 2:1316745/1‑91 (MQ=255) aagaGTAAAATAAATAACATTCAAAGATTATGCCAACGCATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt < 2:679663/91‑1 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 1:3023868/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 2:2200810/1‑91 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg < 1:2247455/91‑1 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATATTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg > 1:3424706/1‑91 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 2:798546/91‑1 (MQ=255) aaaaaaCATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttag < 1:568876‑M1/91‑74 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 2:2537767‑M1/1‑91 (MQ=255) aaaaCATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagac < 1:3227008‑M1/91‑76 (MQ=255) aaaaCATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagac < 1:2655286‑M1/91‑76 (MQ=255) aCATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgc > 2:2670709‑M1/1‑13 (MQ=255) aCATTCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgc < 2:1049593‑M2/91‑65 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGGATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc < 2:3384859‑M1/91‑1 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTTCATCTTGAATTGCACATTTATGTTCACAacttc < 2:1925320‑M1/91‑3 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc < 2:331727‑M1/91‑1 (MQ=255) cATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgca < 2:73518‑M1/91‑80 (MQ=255) cATTCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgca > 1:2768115‑M1/1‑12 (MQ=255) CATTCAAAGATTATGCCAACACATTAAATCTTTGAATGATTTTTTTTGTTTTATTTTACATATTAAATTTCAAATTTAAATtcacaaatat < 2:3805781‑M1/91‑5 (MQ=255) ttCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatc > 1:1659314‑M1/1‑10 (MQ=255) TTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag > 2:2265986‑M1/1‑91 (MQ=255) tCAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatca > 1:140359‑M1/1‑9 (MQ=255) tCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatca < 2:2747266‑M2/91‑69 (MQ=255) TCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagc > 2:1990997‑M1/1‑91 (MQ=255) cAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcat < 1:1012239‑M1/91‑84 (MQ=255) cAAAGATTtaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcat < 1:340220‑M1/91‑84 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa > 1:2214823‑M1/1‑91 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa > 1:1328957‑M1/1‑91 (MQ=255) aaGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattt < 2:452196‑M2/91‑72 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTACGTTCACAACTacaagcaat < 2:3578153‑M1/91‑2 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag > 1:1192490‑M1/1‑91 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGt < 2:1111972‑M1/91‑1 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:929704‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:2276563‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCGTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:3337131‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAACG‑TTTTTTATGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:3904691‑M1/1‑91 (MQ=255) ttaatgtgttggcataatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattcgatta < 1:3274345‑M1/91‑91 (MQ=255) tATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattcgatta < 1:1551282‑M2/91‑77 (MQ=255) TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc > 1:3445656‑M1/1‑91 (MQ=255) TATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAc < 2:1875787‑M1/91‑1 (MQ=255) | ATTAAAAAAATCATTTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGAC > USA300TCH1516_ALE/2218138‑2218318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |