| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2218228 | 156 (0.770) | 14 (0.090) | 10/124 | NT | 9.9% | intergenic (+21/+38) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ |
| ? | USA300TCH1516_ALE | = 2218242 | 135 (0.860) | intergenic (+35/+24) | USA300HOU_RS11330/fabZ | hypothetical protein/3‑hydroxyacyl‑[acyl‑carrier‑protein] dehydratase FabZ | |||||
Only 100 of 293 total aligned reads displayed.
TTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCT > USA300TCH1516_ALE/2218152‑2218332 | ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa < 1:290516/91‑1 (MQ=255)ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa < 1:2714450/91‑1 (MQ=255)ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa < 1:1565172/91‑1 (MQ=255)ttAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTa > 1:1843227/1‑91 (MQ=255) tAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAa < 1:3274356‑M2/91‑2 (MQ=255) cGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatct > 2:3616171‑M2/1‑86 (MQ=255) ttgcttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCttt > 1:1672841‑M1/53‑91 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 1:1012239‑M2/91‑9 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg > 1:65320‑M2/1‑83 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 2:1068470‑M2/91‑9 (MQ=255) atgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttg < 1:340271‑M2/91‑9 (MQ=255) tgatgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttga > 1:140359‑M2/1‑82 (MQ=255) cttgtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATAAAATCTTTGaa > 2:1012201‑M1/50‑91 (MQ=255) cttgtagttgtgaaattacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGaa > 2:2295416‑M1/50‑91 (MQ=255) tgCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatg < 2:73518‑M2/91‑13 (MQ=255) gtagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑t > 1:3484940‑M1/47‑91 (MQ=255) tagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tt > 2:2721219‑M1/46‑91 (MQ=255) tagttgtgaacttacatttgcaattcaagatgtaaaataaaacaaAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tt > 1:154399‑M1/46‑91 (MQ=255) cAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtt > 2:65655‑M2/1‑77 (MQ=255) aGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgttt > 2:3295930‑M2/1‑76 (MQ=255) gactaGACCAAAGATAAAGGATAAAAAAATAGAAAAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt > 2:2949852‑M2/3‑75 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 1:3227008‑M2/91‑17 (MQ=255) gTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAaatctttgaatgtttt < 1:2655286‑M2/91‑17 (MQ=255) aaaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑tttttttt < 2:245321/91‑1 (MQ=255) aaCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTg < 1:1752605/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGt < 2:2861730/91‑1 (MQ=255) aCCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGt < 1:2437390/91‑1 (MQ=255) cAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttt > 2:2576535/1‑91 (MQ=255) aaGTTAATGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttta < 1:1961196/91‑1 (MQ=255) aaGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGtttta > 1:3652871/1‑91 (MQ=255) gTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCTAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatt < 1:3328505/91‑1 (MQ=255) ttAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTttttattt > 2:1847589/1‑91 (MQ=255) aaaGGGTGAAAGAGTAGAAGAGTAAGATAAAGAGCGTTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta < 2:213946/91‑1 (MQ=255) aaaGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGttttatttta > 2:3820295/1‑91 (MQ=255) aaGGATGAAAAATTAGAAGAGTAAAAT‑AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACa < 2:3697105/91‑1 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTTTTTATTTTACa > 2:2466724/1‑91 (MQ=255) aGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACa > 2:1756992/1‑91 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc > 2:1991659/1‑91 (MQ=255) gATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATc < 2:3058793/91‑1 (MQ=255) aTGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCTAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCt < 1:510046/91‑1 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGa < 1:1158023/91‑1 (MQ=255) aaaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGa < 1:863107/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa < 1:1030404/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa < 1:3910045/91‑1 (MQ=255) aaaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGaa > 1:2034086/1‑91 (MQ=255) aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAt > 2:1286687/1‑91 (MQ=255) aaaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAt < 1:2994302/91‑1 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAtt < 1:2146817/91‑1 (MQ=255) aaTTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAAtt < 1:278512/91‑1 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGTATTGc > 2:1911188/1‑91 (MQ=255) ttAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGc < 2:1599628/91‑1 (MQ=255) tAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTTCa > 2:196645/1‑91 (MQ=255) tAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCa < 1:3367112/91‑1 (MQ=255) agaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCaa > 2:1248632/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTTCaaa > 2:596992/1‑91 (MQ=255) gaagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCaaa > 1:1356688/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt > 1:3009884/1‑91 (MQ=255) aagaGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAAt > 2:770944/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg > 2:2200810/1‑91 (MQ=255) agagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATg < 1:581317/91‑1 (MQ=255) gagTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGt > 1:3818001/1‑91 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg < 1:1922912/91‑1 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg < 1:2247455/91‑1 (MQ=255) taaaataaaaAACATTCAAAGATTATGCCAACACATTAAATATTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAg > 1:3424706/1‑91 (MQ=255) aaaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGt < 1:913500/91‑1 (MQ=255) aaataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGtt < 1:1652455/91‑1 (MQ=255) aataaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTATATCTTGAATTGCAAATGTAAGttt > 2:956574/1‑90 (MQ=255) taaaaAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcac < 1:1270775/91‑1 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTTTTTTACATCTTGAATTGCAAATGTAAGTTcaca < 2:3591018‑M1/91‑1 (MQ=255) AAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTcaca > 2:2537767‑M1/1‑91 (MQ=255) AAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACaa < 1:608354‑M1/91‑1 (MQ=255) AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAAc > 2:1451360‑M1/1‑91 (MQ=255) AAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTCTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAAc < 1:3132803‑M1/91‑1 (MQ=255) AAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACt > 1:3093974‑M1/1‑91 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTTTTTTATTTTACATCTTGAATTGCTAATGTAAGTTCACAACTAc < 2:509417‑M1/91‑1 (MQ=255) ACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAc > 2:1563817‑M1/1‑91 (MQ=255) CATTCAAAGATTATGCCAACACATTAAATCTTTGAATGATTTTTTTTGTTTTATTTTACATATTAAATTTCAAATTTAAATtcacaaatat < 2:3805781‑M1/91‑5 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 2:3074495‑M1/1‑91 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 2:3842822‑M1/1‑91 (MQ=255) ATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaa > 1:3178507‑M1/1‑91 (MQ=255) TTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaag > 2:2265986‑M1/1‑91 (MQ=255) tCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttgctcttctaatttttcatcctttaactttggtttagactgcatca < 2:3552137‑M2/91‑69 (MQ=255) tCAAAGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatca < 2:2747266‑M2/91‑69 (MQ=255) TCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagc > 2:390307‑M1/1‑91 (MQ=255) AAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaa > 1:2214823‑M1/1‑91 (MQ=255) aaGATTATGCCAACACATTAaatctttgaatgttttttattttactcttctaatttttcatcctttaactttggtttagactgcatcattt < 2:452196‑M2/91‑72 (MQ=255) AAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTAcaagcaag < 2:1180422‑M1/91‑1 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACTTCTTGAATTGCATATGTAAGTTCTCTAcgacaagcacgt < 2:1324159‑M1/91‑4 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAACTGTAAGTTCACAACTACAAGCAAGt < 1:3671035‑M1/91‑1 (MQ=255) AGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGt < 2:1111972‑M1/91‑1 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:3125930‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 1:929704‑M1/1‑91 (MQ=255) GATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGtt > 2:2480417‑M1/1‑91 (MQ=255) tGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCa > 2:1703359/1‑91 (MQ=255) gCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt < 2:68710/91‑1 (MQ=255) gCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCAt > 1:2467245/1‑91 (MQ=255) aaCACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGa < 1:819443/91‑1 (MQ=255) caTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt < 2:3375549/91‑1 (MQ=255) caTTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGt < 1:2592688/91‑1 (MQ=255) aaaTCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCt < 1:770053/91‑1 (MQ=255) | TTAATCGAATGATGCAGTCTAAACCAAAGTTAAAGGATGAAAAATTAGAAGAGTAAAATAAAAAACATTCAAAGATTATGCCAACACATTAAATCTTTGAATG‑TTTTTTTTGTTTTATTTTACATCTTGAATTGCAAATGTAAGTTCACAACTACAAGCAAGTTGACCATCGACAGTAGCT > USA300TCH1516_ALE/2218152‑2218332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |