| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2371393 = | 188 (0.920) | 9 (0.050) | 6/146 | NT | 5.1% | coding (111/309 nt) | rpsJ | 30S ribosomal protein S10 |
| ? | USA300TCH1516_ALE | 2371427 = | 162 (0.870) | coding (77/309 nt) | rpsJ | 30S ribosomal protein S10 | |||||
Only 100 of 232 total aligned reads displayed.
TTGTTCGAATTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAATCTGATT > USA300TCH1516_ALE/2371303‑2371483 | ttgttCGAATTGTTCACGTGAATCTTTATTCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCa < 2:2508439/91‑1 (MQ=255)aggagggaaaattatggcaaaacaaaaaatcagaatcagattaaaagcttatgatcaccgcgtaattgatcaatcagcagagaagattgta < 1:418250‑M1/1‑1 (MQ=255) tgttCGAATTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAg < 1:3551583/91‑1 (MQ=255) tgttCGAATTGTTCACGTGAATCTTCATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAg > 2:326434/1‑91 (MQ=255) gagggaaaattatggcaaaacaaaaaatcagaatcagattaaaagcttatgatcaccgcgtaattgatcaatcagcagagaagattgtAGa < 1:1936435‑M1/3‑1 (MQ=255) gggaaaattatggcaaaacaaaaaatcagaatcagattaaaagcttatgatcaccgcgtaattgatcaatcagcagagaagattgtAGaaa < 1:2945991‑M1/5‑1 (MQ=255) cGAATTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAAc > 1:1604708/1‑91 (MQ=255) aaTTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACAt < 1:889950/91‑1 (MQ=255) aTTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATc > 1:794568/1‑91 (MQ=255) aTTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATc > 1:3273728/1‑91 (MQ=255) aTTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATc < 1:3321953/91‑1 (MQ=255) aTTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATc > 1:1855949/1‑91 (MQ=255) aTTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATc < 2:679344/91‑1 (MQ=255) ttGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCt < 2:797297/91‑1 (MQ=255) tGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTg < 1:1679814/91‑1 (MQ=255) tGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTg > 2:2161843/1‑91 (MQ=255) ttCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCa > 1:3719960/1‑91 (MQ=255) tCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCAc > 2:1320337/1‑91 (MQ=255) cACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCAcc > 2:2981866/1‑91 (MQ=255) cACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCAcc < 1:2502145/91‑1 (MQ=255) aCGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCa < 2:2138643/91‑1 (MQ=255) aCGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCa < 2:2139427/91‑1 (MQ=255) gcaaaacaaaaaatcagaatcagattaaaagcttatgatcaccgcgtaattgatcaatcagcagagaatattgtAGAAACATCTGCACCAg < 2:3189559‑M1/17‑1 (MQ=255) cGTGAATCTTTATACTTAGGCACGGCACGGATGATTGTGTAAACTGATTGCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAg < 2:3427502/91‑1 (MQ=255) tGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGaa < 2:2272064/91‑1 (MQ=255) aTCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTCGTATCGGAATTGGTCCAGAAACATCTCCACCAGAACGt > 1:135708/1‑91 (MQ=255) tCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGtt > 2:3241968/1‑91 (MQ=255) cTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGttt > 2:2817771/1‑91 (MQ=255) cTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGttt > 1:1292515/1‑91 (MQ=255) tttATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTc < 2:3933137/91‑1 (MQ=255) ttATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCg < 2:2117452/91‑1 (MQ=255) ttATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCg < 2:2421731/91‑1 (MQ=255) tataCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGc > 1:655031/1‑91 (MQ=255) tataCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGc > 2:894057/1‑91 (MQ=255) ataCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCt > 1:2196135/1‑91 (MQ=255) ataCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCt > 2:2326518/1‑91 (MQ=255) taCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTg > 2:3058808/1‑91 (MQ=255) aCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGt < 1:1047409/91‑1 (MQ=255) aCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGt < 1:3005765/91‑1 (MQ=255) aCTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGt > 1:2757198/1‑91 (MQ=255) cagaatcagattaaaagcttatgatcaccgcgtaattgatcaatcagcagagaagattgtAGAAACATCTGCACCAGAACGTTTCGCTGtt > 1:3910336‑M1/61‑91 (MQ=255) cTTTTGCGCGGCACGGATAAGTGTGTACGCTGCTCTCTCAGTTGGTAGCGGAGTTGTGCCAGAAACATCTGCACCAGACCGTTAAGCTGtt < 2:173026/91‑1 (MQ=255) cTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAGCGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGtt < 1:2030111/91‑1 (MQ=255) tGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTa > 1:3040805/1‑91 (MQ=255) tGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTa > 2:1377684/1‑91 (MQ=255) gcacggcacgGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTAc > 2:2451639/1‑91 (MQ=255) gcagcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTTGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACaa < 2:490949/88‑1 (MQ=255) acggcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACaa > 2:879487/1‑91 (MQ=255) cggcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAt < 2:256316/91‑1 (MQ=255) cggcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAt > 2:1191734/1‑91 (MQ=255) cggcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAt < 1:95770/91‑1 (MQ=255) cggcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAt > 1:274247/1‑91 (MQ=255) cggcacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAt < 1:96600/91‑1 (MQ=255) gcacggATGATTGTGAAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATATGCACCAGAACGTTTCGCTGTTTCTACAAtct > 1:3372550/1‑91 (MQ=255) cacggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAtctt > 1:3922177/1‑91 (MQ=255) acggATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAAtcttc < 1:2393277/91‑1 (MQ=255) ggATGATTGTGTAAACTGATTTCTCAGTTGGTAATGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTtctc > 1:994653/1‑91 (MQ=255) gatgatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTctct > 1:1619123/1‑91 (MQ=255) atgatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctg < 1:2113382/91‑1 (MQ=255) atgatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctg < 1:3137245/91‑1 (MQ=255) atgatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctg < 1:3433/91‑1 (MQ=255) tgatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGGACCAGAACGTTTCGCTGTTTCTACAGTCTTCTctgc < 2:3456553/91‑1 (MQ=255) tgatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctgc > 2:663766/1‑91 (MQ=255) gatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctgct > 2:512461/1‑91 (MQ=255) gatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctgct > 1:2829520/1‑91 (MQ=255) gatTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTctgct > 1:3639302/1‑91 (MQ=255) gtgtAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCtgatt > 1:1104985/1‑91 (MQ=255) gtAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAGCGTTTCGCTGTTTCTACAATCTTCTCTGCtgattga > 2:3574319/1‑91 (MQ=255) aaaGTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTGTGCTGATTGATc < 1:3057919/91‑1 (MQ=255) aaaCTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATc < 2:181437/91‑1 (MQ=255) aaaCTCATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATc < 2:3201635/91‑1 (MQ=255) aaCTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCa < 1:2976193/91‑1 (MQ=255) aCTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCaa < 2:3832715/91‑1 (MQ=255) aCTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCaa < 2:2061690/91‑1 (MQ=255) aCTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCaa < 2:532289/91‑1 (MQ=255) aCTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCaa > 1:1521016/1‑91 (MQ=255) aTTTCTCAGTTGGTAACGGAATTGTTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTAc < 2:3675313/91‑1 (MQ=255) tttCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTAcg > 2:1648247/1‑91 (MQ=255) tctcAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTAcgcg < 1:1864485/91‑1 (MQ=255) tgatcaatcagcagagaagattgcAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCgg > 2:424538‑M1/25‑91 (MQ=255) ctcAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCgg < 2:1032384/91‑1 (MQ=255) tcAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATCACGCGGt < 1:622762/91‑1 (MQ=255) aGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGa > 1:2752523/1‑91 (MQ=255) ttGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATc < 1:671909/91‑1 (MQ=255) ttGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATc < 2:1589716/91‑1 (MQ=255) tGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCa < 2:1864522/91‑1 (MQ=255) aCGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGc < 2:745294/91‑1 (MQ=255) aCGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGc < 2:2206914/91‑1 (MQ=255) cGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCt > 1:808531/1‑91 (MQ=255) ggAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCtt > 1:172719/1‑91 (MQ=255) gAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGTTCATAAGCttt > 1:3579796/1‑91 (MQ=255) aaTTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCtttt < 1:3092487/91‑1 (MQ=255) aTTGGTCCAGAAACATTTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTa > 1:3634387/1‑91 (MQ=255) ttGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTaa < 2:3653550/91‑1 (MQ=255) ttGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTaa < 1:2191928/91‑1 (MQ=255) tGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAAt > 1:3003976/1‑91 (MQ=255) ccAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAAtctga > 1:1072166/1‑91 (MQ=255) ccAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAAtctga > 2:2697151/1‑91 (MQ=255) cAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAAtctgat > 2:2788340/1‑91 (MQ=255) cAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAAtctgat > 1:322403/1‑91 (MQ=255) | TTGTTCGAATTGTTCACGTGAATCTTTATACTTATGCACGGCACGGATGATTGTGTAAACTGATTTCTCAGTTGGTAACGGAATTGGTCCAGAAACATCTGCACCAGAACGTTTCGCTGTTTCTACAATCTTCTCTGCTGATTGATCAATTACGCGGTGATCATAAGCTTTTAATCTGATT > USA300TCH1516_ALE/2371303‑2371483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |