| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2461467 = | 159 (0.780) | 20 (0.110) | 9/146 | NT | 12.1% | intergenic (‑193/+38) | natA_2/yhaI | ABC transporter ATP‑binding protein NatA/Inner membrane protein YhaI |
| ? | USA300TCH1516_ALE | 2461499 = | 147 (0.790) | intergenic (‑225/+6) | natA_2/yhaI | ABC transporter ATP‑binding protein NatA/Inner membrane protein YhaI | |||||
Only 100 of 263 total aligned reads displayed.
TGAAAAATTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTACACG > USA300TCH1516_ALE/2461377‑2461557 | taaaaaattTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAA < 2:195266‑M1/89‑1 (MQ=255) gAAAAATTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAA < 1:3446922‑M1/91‑1 (MQ=255) aaccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataa < 1:1173639‑M1/2‑1 (MQ=255) aaccagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataa < 2:1862103‑M1/2‑1 (MQ=255) accagtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatataaa > 2:1334807‑M1/89‑91 (MQ=255) aaaaaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAA < 2:2328573‑M1/91‑1 (MQ=255) aaaaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAAT > 1:2140625‑M1/1‑91 (MQ=255) aaaaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAAT > 1:237893‑M1/1‑91 (MQ=255) agtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAatat < 2:2476129‑M1/6‑1 (MQ=255) aaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATAT > 2:2623803‑M1/1‑91 (MQ=255) aaTTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTCTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATAT > 2:3117354‑M1/1‑91 (MQ=255) gtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATc > 2:857010‑M1/85‑91 (MQ=255) gtgacatctgaaacaccggaaaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATc > 2:1372851‑M1/85‑91 (MQ=255) ttAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATccc < 1:1790255/91‑1 (MQ=255) ttAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATccc < 1:419353/91‑1 (MQ=255) ttAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATccc < 1:2867726/91‑1 (MQ=255) aaTAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTTTTTTTTTTTTTTGCCTTATTTGTAAAAAAATATTCCAGc > 2:3268931/1‑91 (MQ=255) aaTAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGc > 2:945122/1‑91 (MQ=255) aaTAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGc < 2:524005/91‑1 (MQ=255) tAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcat < 1:909544/91‑1 (MQ=255) tAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcat < 1:2895989/91‑1 (MQ=255) tAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGcat < 1:2842199/91‑1 (MQ=255) aGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCATTATTTAAAAAAAAATATCCCAGcatc < 2:3947052/91‑1 (MQ=255) aGTGCCATGTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTAATTATAAAAAAATATCCCAGcatc < 2:3946797/91‑1 (MQ=255) ccATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATtg > 1:3304173/1‑91 (MQ=255) ttttGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGcc < 1:1088065/91‑1 (MQ=255) ttGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCga < 1:1871322/91‑1 (MQ=255) tGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCtcggcacaatgatgctggg < 1:1027367‑M1/91‑20 (MQ=255) tGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAg < 1:2941317‑M2/91‑2 (MQ=255) gCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAga > 1:1338703‑M2/1‑89 (MQ=255) aaaagcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCgaga > 1:2568819‑M1/65‑91 (MQ=255) cATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAgat > 2:180060‑M2/1‑88 (MQ=255) cATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAgat < 2:3217574‑M2/91‑4 (MQ=255) aTGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCtcggcacaatgatgctgggata < 1:2507381‑M1/91‑23 (MQ=255) aTGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAgata > 1:2280984‑M2/1‑87 (MQ=255) tGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCtcggcacaatgatgctgggatat < 1:2434466‑M1/91‑24 (MQ=255) tGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAgatat > 2:288572‑M2/1‑86 (MQ=255) tGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTAGTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAgatat > 2:1304969‑M2/1‑86 (MQ=255) agcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGatat > 2:541175‑M1/62‑91 (MQ=255) agcgtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGatat > 1:3742358‑M1/62‑91 (MQ=255) gtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTta > 1:2073560‑M1/59‑91 (MQ=255) gtgtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTta > 1:2693632‑M1/59‑91 (MQ=255) gtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTtata > 2:885320‑M1/57‑91 (MQ=255) gtacatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTtata > 1:3542648‑M1/57‑91 (MQ=255) gTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTatat < 1:1697283/91‑1 (MQ=255) tATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTGTTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATc < 2:3540169/91‑1 (MQ=255) tATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATc > 2:304483/1‑91 (MQ=255) tATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATc > 2:374191/1‑91 (MQ=255) acatctgaaacaccgaaaacaccggaagaaacagataatcaattgtaatgatatAAATATCCCAGCATCATTGTGCCGAGATATTTATATc > 2:1718058‑M1/55‑91 (MQ=255) cATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCAtt < 1:623635/91‑1 (MQ=255) ttAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTAc < 1:51475/91‑1 (MQ=255) ttAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTAc < 1:3018460/91‑1 (MQ=255) ttAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTAc > 2:1479219/1‑91 (MQ=255) tAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACa < 1:1766365/91‑1 (MQ=255) tAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACa < 1:2734208/91‑1 (MQ=255) gCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAAt > 1:3601578/1‑91 (MQ=255) gCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAAt > 2:1083438/1‑91 (MQ=255) tAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGAt < 2:620009/91‑1 (MQ=255) aGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGAtt > 1:3194414/1‑91 (MQ=255) gATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTa > 1:372387/1‑91 (MQ=255) atatGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTAt > 2:116778/1‑91 (MQ=255) atatGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTAt < 1:1265872/91‑1 (MQ=255) tGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTg > 2:2244108/1‑91 (MQ=255) gTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGt > 1:561151/1‑91 (MQ=255) gTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATCATCTGt < 1:3080127/91‑1 (MQ=255) ttttttCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGtt < 1:1259432/91‑1 (MQ=255) ttttttCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGtt < 1:2252061/91‑1 (MQ=255) ttttCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTttc < 2:2432908/91‑1 (MQ=255) tCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTttcttc < 2:3520203/91‑1 (MQ=255) ccATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTcc < 2:111468/91‑1 (MQ=255) cATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCg > 2:3382216/1‑91 (MQ=255) cATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCg < 1:193714/91‑1 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt < 2:1631564/91‑1 (MQ=255) tGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgt > 2:2068010/1‑91 (MQ=255) gCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGgtg < 1:3288724/91‑1 (MQ=255) tttATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGttt < 1:1416033/91‑1 (MQ=255) tttATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGttt < 1:3822222/91‑1 (MQ=255) ttATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGtttt > 2:2363787/1‑91 (MQ=255) ttATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGtttt < 2:1416306/91‑1 (MQ=255) tATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTc > 2:779905/1‑91 (MQ=255) aTTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCg > 1:1522759/1‑91 (MQ=255) aTTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCg > 2:1173639/1‑91 (MQ=255) ttGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCgg > 1:839987/1‑91 (MQ=255) ttGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCgg > 2:688506/1‑91 (MQ=255) ttGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCgg < 1:2187209/91‑1 (MQ=255) ttGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTGTCgg < 1:3126954/91‑1 (MQ=255) tGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGgt > 2:649583/1‑91 (MQ=255) cTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGtt < 2:2770337/91‑1 (MQ=255) ttATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGttt < 1:2124740/91‑1 (MQ=255) aTTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCa < 1:802537/91‑1 (MQ=255) tttGTAAAAAAATATCCCAGCAGCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAg < 2:3183815/91‑1 (MQ=255) tGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGAt < 1:2783791/91‑1 (MQ=255) tAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGt < 2:3336133/91‑1 (MQ=255) aaaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTaca < 1:736822/91‑1 (MQ=255) aaaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTaca < 2:1824810/91‑1 (MQ=255) aaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTacac > 2:3074412/1‑91 (MQ=255) aaaaTATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTacac > 2:2176983/1‑91 (MQ=255) aaaTATCtcggcacaatgatgctgggatatttttttacaaataaggcaataaaggcatggaaaaaacatatctagtgctaatgatacttaa > 1:856559‑M1/1‑7 (MQ=255) AAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTACACg < 1:2729452‑M1/91‑1 (MQ=255) AAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTACACg > 2:2146104‑M1/1‑91 (MQ=255) | TGAAAAATTTAAATAGTGCCATTTTTGCATGTTAAGTATCATTAGCACTAGATATGTTTTTTCCATGCCTTTATTGCCTTATTTGTAAAAAAATATCCCAGCATCATTGTGCCGAGATATTTATATCATTACAATTGATTATCTGTTTCTTCCGGTGTTTTCGGTGTTTCAGATGTACACG > USA300TCH1516_ALE/2461377‑2461557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |