| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2577878 | 153 (0.750) | 26 (0.150) | 11/140 | NT | 15.5% | intergenic (‑599/+71) | opuCA/USA300HOU_RS13285 | Carnitine transport ATP‑binding protein OpuCA/hypothetical protein |
| ? | USA300TCH1516_ALE | = 2577890 | 149 (0.840) | intergenic (‑611/+59) | opuCA/USA300HOU_RS13285 | Carnitine transport ATP‑binding protein OpuCA/hypothetical protein | |||||
Only 100 of 314 total aligned reads displayed.
CCTTTTGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATCCCTT > USA300TCH1516_ALE/2577788‑2577968 | ccTTTTGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAA > 1:1158154‑M1/1‑91 (MQ=255) ttttGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACa < 2:3596084/91‑1 (MQ=255) ttGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGc > 1:3445849/1‑91 (MQ=255) tGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCa > 1:1124608/1‑91 (MQ=255) tGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCa < 2:1323066/91‑1 (MQ=255) gCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCAt > 1:286325/1‑91 (MQ=255) gCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCAt < 2:2517064/91‑1 (MQ=255) aaCATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAg > 2:238199/1‑91 (MQ=255) aCATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgc < 1:36618‑M1/91‑11 (MQ=255) cATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGcc < 2:2167330/91‑1 (MQ=255) aTTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCa < 1:862661/91‑1 (MQ=255) ttttCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAt > 2:913204‑M2/1‑90 (MQ=255) tttCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatggtgtt < 1:3128098‑M1/91‑15 (MQ=255) tttCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgtt < 1:451614‑M1/91‑15 (MQ=255) tttCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgtt < 2:20466‑M1/91‑15 (MQ=255) tttCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAtt > 1:3209271‑M2/1‑89 (MQ=255) ttCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgttg < 1:3115688‑M1/91‑16 (MQ=255) tCTACTCCCAGGCCTGTAACGGAATTCCAGCGTCAAAGTGTTGCCCATGACAGACACACCGAAAAAAGCAACCAACAGCATGAGCCAttgg > 2:1496271‑M2/1‑87 (MQ=255) tCTACTCCCAAGCCTGTAACGGAATTCCAACGTGAAAGTGTTGCCCGTGACAGACACACCTAAAGAAACAACCAACAGCATGAGCCAttgg > 2:396661‑M2/1‑87 (MQ=255) tCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttgg > 2:3124889‑M2/1‑87 (MQ=255) tCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttgg > 1:2158833‑M2/1‑87 (MQ=255) tCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttgg < 1:3251732‑M2/91‑5 (MQ=255) cTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttggt < 1:1839799‑M2/91‑6 (MQ=255) cTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACATAAAAAAACAACCAACAGCATGAGCCAttggt < 1:3357041‑M2/91‑6 (MQ=255) cTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCACGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttggt < 1:3143137‑M2/91‑6 (MQ=255) cTAATCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgttggt < 1:3557133‑M1/91‑18 (MQ=255) aCTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgttggttg < 1:3433416‑M1/91‑20 (MQ=255) aCTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgttggttg < 2:3489526‑M1/91‑20 (MQ=255) aCTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttggttg < 2:3620469‑M2/91‑8 (MQ=255) aCTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttggttg < 1:3766216‑M2/91‑8 (MQ=255) cTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttggttgt > 2:2371259‑M2/1‑83 (MQ=255) cTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCAttggttgt < 1:2564480‑M2/91‑9 (MQ=255) ccAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTc < 2:2647323/91‑1 (MQ=255) cAATCCTGTAACGGAAGTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCACCAGCATGAGCCAttggttgttgcg > 2:861822‑M2/1‑79 (MQ=255) cAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCg < 2:1993053/91‑1 (MQ=255) aGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCgtg < 1:1492735/91‑1 (MQ=255) aGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCgtg < 1:1491918/91‑1 (MQ=255) gCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCgtgt > 2:1834148/1‑91 (MQ=255) tGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCAt < 2:2475876/91‑1 (MQ=255) gTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATc < 1:3390912/91‑1 (MQ=255) tAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACCCCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCt > 2:644375/1‑91 (MQ=255) tAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATCGGTTGTTTCGTGTCATCt > 2:1942531/1‑91 (MQ=255) aaCGGAATTCCAACGTCAAAGTGTTGCCCCTGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCtt > 2:3442838/1‑91 (MQ=255) aaCGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCtt > 2:1899154/1‑91 (MQ=255) aCGGAAGTCTAACGTCAAAGTGTTGCCCTTGACAGAACCACCTAAAAAACCAACCAACAGCATGGGCCATTGGTTGTTTCGTGTCATCTTg < 2:2291072/91‑1 (MQ=255) cGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGt < 2:3840465/91‑1 (MQ=255) cGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGt < 1:2330087/91‑1 (MQ=255) ggAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTa > 2:854491/1‑91 (MQ=255) ggAATTCCAACGTCAAAGTGTTGCCCAGGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTa < 2:2543217/91‑1 (MQ=255) aTTCCAACGTCCAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAAtggctcatgctgttggttgtttttttaggtgtgtctgtc < 1:1738377‑M1/91‑40 (MQ=255) tCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAGAACAACCAACAGCATGAGCCAttggttgtttttttaggtgtgtctgtcat > 2:977541‑M2/1‑62 (MQ=255) tCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTAtgttg < 1:2380087/91‑1 (MQ=255) tCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGATGTTTCGTGTCATCTTGTAtgttg > 1:3900129/1‑91 (MQ=255) aaCGGCAAAATATGGCCCATGACAAACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTAtgttgttg < 2:158495/91‑1 (MQ=255) aCGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTAtgttgttgt < 1:1164290/91‑1 (MQ=255) aCGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTAtgttgttgt > 1:633519/1‑91 (MQ=255) cGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGta < 2:1437079/91‑1 (MQ=255) tCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGtata > 2:2769569/1‑91 (MQ=255) aGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCg > 2:658727/1‑91 (MQ=255) gtgtTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCgg < 1:1290094/91‑1 (MQ=255) gtTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTa < 1:1394345/91‑1 (MQ=255) ttGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGCTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTAt > 2:438425/1‑91 (MQ=255) tGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATg > 1:703093/1‑91 (MQ=255) gCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGc < 1:566/91‑1 (MQ=255) gCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGc < 1:527/91‑1 (MQ=255) cATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCttt < 1:2504789/91‑1 (MQ=255) gacagacaCACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACt < 1:2847918/91‑1 (MQ=255) acagacaCACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTc > 2:1192090/1‑91 (MQ=255) agacaCACCTAAAAAAACAACCAACAGCATGAGCCATTGGCTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCat > 2:3255341/1‑91 (MQ=255) acacacCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCCTCTTGTATGTTGTTGTATAACCGGTATTCTTTCATCatta > 2:105219/1‑91 (MQ=255) acacCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCattaat < 1:2264039/91‑1 (MQ=255) cacCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCattaatt < 2:3167145/91‑1 (MQ=255) aaaaaCAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATc < 1:966123/91‑1 (MQ=255) aaaCAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCAt < 1:1873327/91‑1 (MQ=255) aacaacCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATg > 1:3885497/1‑91 (MQ=255) acaacCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggag > 1:3082733‑M1/1‑8 (MQ=255) acaacCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggag > 1:3042639‑M1/1‑8 (MQ=255) acaacCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggag > 1:104370‑M1/1‑8 (MQ=255) acaacCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggag > 2:2983705‑M1/1‑8 (MQ=255) acaacCAACAGCATGAGCCAttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggag < 1:3070824‑M2/91‑72 (MQ=255) caaccaacAGCATGAGCCAttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagt < 1:844990‑M2/91‑73 (MQ=255) caacCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagt < 1:2708402‑M1/91‑85 (MQ=255) aaccaacAGCATGAGCCAttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagta < 2:2833006‑M2/91‑74 (MQ=255) aaccaacAGCATGAGCCAttggttgtttctttaggcgtgtctgtcatggccaccactttgacgctggacttccgttccaggcttgggactc < 2:1049949‑M2/91‑74 (MQ=255) aacCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagta < 2:463145‑M1/91‑86 (MQ=255) accaacAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATc > 1:3317030/1‑91 (MQ=255) acCAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtag < 1:2134747‑M1/91‑87 (MQ=255) ccaacAGCATGAGCCAttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtaga < 1:489441‑M2/91‑76 (MQ=255) ccaacAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATcc > 1:654261/1‑91 (MQ=255) ccAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtaga > 2:3116784‑M1/1‑4 (MQ=255) ccAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtaga < 1:2352958‑M1/91‑88 (MQ=255) ccAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtaga > 1:3932745‑M1/1‑4 (MQ=255) caacAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATccc < 1:2455947/91‑1 (MQ=255) cAAtggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtagaa < 1:3465061‑M1/91‑89 (MQ=255) aatggctcatgctgttggttgtttttttaggtgtgtctgtcatgggcaacactttgacgttggaattccgttacaggcttgggagtagaaa > 2:3929053‑M1/1‑2 (MQ=255) aacAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATCCCt < 2:220566/91‑1 (MQ=255) aacAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATCCCt > 1:1802797/1‑91 (MQ=255) acAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCCTGCATCCCtt > 2:3646298/1‑91 (MQ=255) acAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATCCCtt > 1:2778458/1‑91 (MQ=255) acAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATCCCtt < 2:534362/91‑1 (MQ=255) | CCTTTTGCTAACATTTTCTACTCCCAAGCCTGTAACGGAATTCCAACGTCAAAGTGTTGCCCATGACAGACACACCTAAAAAAACAACCAACAGCATGAGCCATTGGTTGTTTCGTGTCATCTTGTATGTTGTTGTATAACCGGTATGCTTTACTCATTAATTACTTATCATGCATCCCTT > USA300TCH1516_ALE/2577788‑2577968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |