| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2674533 = | 142 (0.700) | 7 (0.040) | 5/140 | NT | 5.8% | intergenic (‑45/+256) | glcB/ydaP | PTS system glucoside‑specific EIICBA component/Putative thiamine pyrophosphate‑containing protein YdaP |
| ? | USA300TCH1516_ALE | 2674588 = | 105 (0.590) | intergenic (‑100/+201) | glcB/ydaP | PTS system glucoside‑specific EIICBA component/Putative thiamine pyrophosphate‑containing protein YdaP | |||||
Only 100 of 247 total aligned reads displayed.
ATGCTTTACCGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAG > USA300TCH1516_ALE/2674443‑2674623 | atgataaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatg > 2:2527559‑M1/91‑91 (MQ=255)atgataaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatg < 2:464092‑M1/1‑1 (MQ=255)aTGCTTTACCGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAG < 2:29833‑M1/91‑1 (MQ=255) tgataaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGc > 1:1501039‑M1/90‑91 (MQ=255) tGCTTTACCGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGC < 1:125575‑M1/91‑1 (MQ=255) gataaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGCa > 2:2576286‑M1/89‑91 (MQ=255) tttACCGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAACTTCCGCTTCCATGTACAAAAAAGGCAcg > 2:1293446‑M1/1‑89 (MQ=255) taaaattgtgaaaaagttgttgaaaacgcttttacacaaatgtataatagccatgaattagatctcacttgcgtgttactgctaatGCAgg < 2:598075‑M1/5‑1 (MQ=255) taaaattgtgaaaaagttgttgaaaacgcttttacaactatgtataatagctatgaattagatatgacttgcgtgttactggtaacGCAgg < 1:3682242‑M1/5‑1 (MQ=255) taaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGCAgg < 2:3396116‑M1/5‑1 (MQ=255) taaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGCAgg > 1:3290573‑M1/87‑91 (MQ=255) ttACCGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGC > 2:2914914‑M1/1‑91 (MQ=255) aaaattgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagatatgaattagatatcacttgcgtgttactggtaatGCAGGc > 1:3431030‑M1/86‑91 (MQ=255) tACCGATACGATGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCA < 1:837423‑M1/91‑1 (MQ=255) ccGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATG < 1:395244‑M1/91‑1 (MQ=255) tgtgaaaaagttgttgaaaacgcttttacaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGCAGGCATGaa > 1:3286936‑M1/81‑91 (MQ=255) gATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGaa < 2:3135068/91‑1 (MQ=255) aTACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGaac > 2:2742458/1‑91 (MQ=255) aCGTTGCAATTGTCCAAACAATTTCTAAAACATATAAACATCCCCTATCTCAATGTCCGCTTCCATGTACAAAAAAAGCAGGCATGaacaa < 2:1166943/91‑1 (MQ=255) cGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAGGCAGGCATGaacaaa < 2:2874530/91‑1 (MQ=255) gCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAg < 1:1014746/91‑1 (MQ=255) gCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAg > 2:3759647/1‑91 (MQ=255) cAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGa > 2:1325945/1‑91 (MQ=255) cAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGa > 2:3032274/1‑91 (MQ=255) aaTTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGAc < 2:1497811/91‑1 (MQ=255) aTTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACt < 1:2193722/91‑1 (MQ=255) ttGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTa > 2:631761/1‑91 (MQ=255) gTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTAtt > 1:2895371/1‑91 (MQ=255) gTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTAtt > 2:3753332/1‑91 (MQ=255) gTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTAtt < 1:3181488/91‑1 (MQ=255) ccAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATtct < 2:2705620/91‑1 (MQ=255) cAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATtctc > 1:2145007/1‑91 (MQ=255) cAATTTCTTAAGCATATAAACATCCCCTATCTCAATTTCCGCTACCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAg < 1:3554285/91‑1 (MQ=255) cAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAg > 2:2833969/1‑91 (MQ=255) aaTTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGt < 1:1790912/91‑1 (MQ=255) aTTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTg > 1:252595/1‑91 (MQ=255) tttCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGc > 1:2357603/1‑91 (MQ=255) ttCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCg < 1:3306369/91‑1 (MQ=255) ttCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCg < 1:3275027/91‑1 (MQ=255) tCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCgg > 1:3582501/1‑91 (MQ=255) tCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCgg > 2:3658239/1‑91 (MQ=255) cTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgt < 1:146135/91‑1 (MQ=255) acaaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgt > 1:722562‑M1/54‑91 (MQ=255) ttAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgtt > 2:474184/1‑91 (MQ=255) tAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgttg > 1:783283/1‑91 (MQ=255) aaatatgtataatagctatgaattagatatcacttgcgtgttactggtaatGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgttg > 2:1628271‑M1/52‑91 (MQ=255) aaaCATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgttgt < 2:230997/91‑1 (MQ=255) atatgtataatagctatgacttagatatcacttgcgtgttactggtaatGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgttgtt > 2:3251637‑M1/50‑91 (MQ=255) aaCATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtt < 1:256755‑M1/91‑33 (MQ=255) aaCATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGgttgtt < 1:2196570/91‑1 (MQ=255) aCATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGttt > 1:2536541/1‑91 (MQ=255) aCATATAAACAACCCCTATCTCAATTTCCGCTTACATGTACAAAAAAAGCAGGCATGAgcaaacaaccgcactatgagaatagtcttgttt < 2:1085788‑M1/91‑34 (MQ=255) atatAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGc < 2:1803090/91‑1 (MQ=255) atatAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGc < 1:2861170/91‑1 (MQ=255) atatAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGc < 1:3397076/91‑1 (MQ=255) atatAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCAGGAgcaaacaaccgcactatgagaatagtcttgtttgt < 1:3340744‑M1/91‑36 (MQ=255) atatAAACATCCCCTATCTCAATTTCCGCGTCCATGTACAAAAAAAGCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtttgt < 2:3417386‑M1/91‑36 (MQ=255) tataAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCt < 1:132506‑M2/91‑2 (MQ=255) ataAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtc < 2:3925150‑M2/91‑3 (MQ=255) ataAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtc < 2:1662480‑M2/91‑3 (MQ=255) taAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtca > 1:1287909‑M2/1‑88 (MQ=255) aaaCATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcat > 1:3658497‑M2/1‑87 (MQ=255) aaaCATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGCGCGGTTGTTTGCtcat < 1:2656837‑M2/91‑5 (MQ=255) aCATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtttgttcatgc < 1:1996698‑M1/91‑42 (MQ=255) aCATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgc > 1:3003381‑M2/1‑85 (MQ=255) cATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtttgttcatgcc < 2:1342286‑M1/91‑43 (MQ=255) cATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcc < 1:2957948‑M2/91‑8 (MQ=255) cATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcc < 1:1336191‑M2/91‑8 (MQ=255) cATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcc > 1:1186328‑M2/1‑84 (MQ=255) aTCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGGACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcct > 2:3058286‑M2/1‑83 (MQ=255) tCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcctg < 1:1068394‑M2/91‑10 (MQ=255) tCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcctg > 2:1780993‑M2/1‑82 (MQ=255) tCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcctg > 1:636158‑M2/1‑82 (MQ=255) ccccTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcctgc < 2:3858571‑M2/91‑11 (MQ=255) ccccTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCtcatgcctgc < 1:3735892‑M2/91‑11 (MQ=255) aTCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAc > 2:1002824/1‑91 (MQ=255) tctcAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTAcc < 2:3529096/91‑1 (MQ=255) cAATTTCCGCTTACATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGt < 2:713157/91‑1 (MQ=255) aaTTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTa > 2:2638006/1‑91 (MQ=255) aaTTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTa > 1:2439343/1‑91 (MQ=255) aaTTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCCGCATTACCAGTa > 2:3269570/1‑91 (MQ=255) aTTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTaa > 1:1693038/1‑91 (MQ=255) tCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAacac < 1:30520/91‑1 (MQ=255) gCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCa > 1:2053082/1‑91 (MQ=255) cTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCaa > 2:1182962/1‑91 (MQ=255) cTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGCAACACGCaa > 1:3548548/1‑91 (MQ=255) cATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGa < 2:1969060/91‑1 (MQ=255) gTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGatat < 2:1593756/91‑1 (MQ=255) gTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGatat < 2:1757803/91‑1 (MQ=255) tACAAGAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATc < 2:3210181/91‑1 (MQ=255) tACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATc > 2:2298734/1‑91 (MQ=255) aCAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCt > 2:1429661/1‑91 (MQ=255) cAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTa < 1:2833969/91‑1 (MQ=255) aaaaaaGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAAt < 2:728008/91‑1 (MQ=255) aaaaGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTc < 2:1481751/91‑1 (MQ=255) gCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtttgttcatgcctgctttttttgtacatggaagcggaaattgagatagggg < 1:3734946‑M1/91‑82 (MQ=255) gCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtttgttcatgcctgctttttttgtacatggaagcggaaattgagatagggg < 1:3179444‑M1/91‑82 (MQ=255) gCAGGCATGAgcaaacaaccgcactatgagaatagtcttgtttgttcatgcctgctttttttgtacatggaagcggaaattgagatagggg > 1:664680‑M1/1‑10 (MQ=255) GCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAg < 1:1765748‑M1/91‑1 (MQ=255) GCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAg < 1:1640555‑M1/91‑1 (MQ=255) | ATGCTTTACCGATACGTTGCAATTGTCCAAACAATTTCTTAAACATATAAACATCCCCTATCTCAATTTCCGCTTCCATGTACAAAAAAAGCAGGCATGAACAAACAAGACTATTCTCATAGTGCGGTTGTTTGCTCATGCCTGCATTACCAGTAACACGCAAGTGATATCTAATTCATAG > USA300TCH1516_ALE/2674443‑2674623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |