| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2681410 = | 206 (1.010) | 9 (0.050) | 5/130 | NT | 5.6% | intergenic (‑445/+134) | USA300HOU_RS13810/mvaA | hypothetical protein/3‑hydroxy‑3‑methylglutaryl‑coenzyme A reductase |
| ? | USA300TCH1516_ALE | 2681465 = | 136 (0.820) | intergenic (‑500/+79) | USA300HOU_RS13810/mvaA | hypothetical protein/3‑hydroxy‑3‑methylglutaryl‑coenzyme A reductase | |||||
Only 100 of 283 total aligned reads displayed.
CAATAAGAAACTCGTTCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGA > USA300TCH1516_ALE/2681320‑2681499 | gacaacaatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaata < 2:2196804‑M1/1‑1 (MQ=255)gacaacaatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaata < 2:2232878‑M1/1‑1 (MQ=255) caacaatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaataaa > 1:1118836‑M1/89‑91 (MQ=255) caacaatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaataaa < 1:1519281‑M1/3‑1 (MQ=255) aacaatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaataaaa > 1:2811143‑M1/88‑91 (MQ=255) caatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAAc < 1:3187782‑M1/6‑1 (MQ=255) aatagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACt < 2:412585‑M1/7‑1 (MQ=255) atagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACtt < 1:1164412‑M1/8‑1 (MQ=255) atagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACtt < 1:3749297‑M1/8‑1 (MQ=255) tagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACTTc > 2:3652076‑M1/83‑91 (MQ=255) tagtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgaagcgcttagataaattaataaaaacaaaaatAAAAACTTc > 2:2373046‑M1/83‑91 (MQ=255) agtaaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACTTCt < 1:1792431‑M1/10‑1 (MQ=255) aaatggcgaatagcgattttaaagaaaagtttaagtcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACTTCTATc < 2:1508865‑M1/13‑1 (MQ=255) tCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACg < 1:476417/91‑1 (MQ=255) tCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACg > 2:580395/1‑91 (MQ=255) ccAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGa < 1:3560949/91‑1 (MQ=255) ccAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGa < 1:1268653/91‑1 (MQ=255) aaTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACg > 2:2655532/1‑91 (MQ=255) aTTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGc < 1:3202024/91‑1 (MQ=255) tttGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCt < 2:1061231/91‑1 (MQ=255) tttGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATAAAATAATAAAAAAACTTCTATCACGAACGCt < 2:2416450/91‑1 (MQ=39) ttGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCtt > 1:261119/1‑91 (MQ=255) ttGAATCCTATAATGAATTCGTATCATGAAGAAGTTATTTACTTTTCATGAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCtt < 2:3000721/91‑1 (MQ=255) tGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTc > 1:78495/1‑91 (MQ=255) gAATCCTATAATGAATTCGTCTCATTAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCa < 1:3677479/91‑1 (MQ=255) gAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCa < 1:2430673/91‑1 (MQ=255) gAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCa < 1:3798519/91‑1 (MQ=255) gAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCa < 1:1907364/91‑1 (MQ=255) aaTCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCaa > 1:1656337/1‑91 (MQ=255) aTCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAt > 2:1157681/1‑91 (MQ=255) aTCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAt < 1:572036/91‑1 (MQ=255) aTCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAt > 1:2240067/1‑91 (MQ=255) tCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAtt < 2:1460112/91‑1 (MQ=255) tCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAAtt > 2:3185190/1‑91 (MQ=255) tataATGAATTTGTCTCATGAAGGAGTTATTTACTTTTCATTAGACTGATTTACTAATCTAAAAACTTCTATCACGAACGCTTCAATTTcc < 2:3021885/91‑1 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 2:1284163/91‑1 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 1:330470/91‑1 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 1:56013/91‑1 (MQ=255) tataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTcc < 2:2073321/91‑1 (MQ=255) ataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCt > 2:3383546/1‑91 (MQ=255) ataATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTCCAATTTCCt < 1:1969945/91‑1 (MQ=255) taATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTg < 2:3814158/91‑1 (MQ=255) taATGAACTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTg < 2:3516266/91‑1 (MQ=255) aTGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTa < 2:2135323/91‑1 (MQ=255) aTGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTa < 2:3078394/91‑1 (MQ=255) aTGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTa > 1:631374/1‑91 (MQ=255) tGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTAt < 1:841049/91‑1 (MQ=255) gAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATg < 2:2024792/91‑1 (MQ=255) ttCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt < 1:3936354/91‑1 (MQ=255) ttCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgt > 2:3337988/1‑91 (MQ=255) cGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgtgt > 1:2137657/1‑91 (MQ=255) cGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCgtgt < 1:2291832/91‑1 (MQ=255) gTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGtgtg > 1:1072250/1‑91 (MQ=255) tctcATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGa < 1:2657677/91‑1 (MQ=255) taagtcagtccatcgtagcgcttagataaattaatatgaacatgaatAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGa > 2:1801392‑M1/48‑91 (MQ=255) ctcATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGAt > 1:2973593/1‑91 (MQ=255) tcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGa > 1:3094598‑M1/44‑91 (MQ=255) tcagtccatcgtagcgcttagataaattaatatgaacaaaaatAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGa > 1:3092132‑M1/44‑91 (MQ=255) aTGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGa < 1:1285563/91‑1 (MQ=255) aagaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGt < 1:1577770/91‑1 (MQ=255) aagaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGt < 2:2056398/91‑1 (MQ=255) agaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGtt < 2:1681692/91‑1 (MQ=255) agaagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGtt < 2:1905477/91‑1 (MQ=255) aagTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGtttt < 2:2734886/91‑1 (MQ=255) atcgtagcgcttagataaattaatatgaacaaaaatAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGttttt > 1:3856951‑M1/37‑91 (MQ=255) agTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGttttt > 1:1576387/1‑91 (MQ=255) agTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGttttt < 2:2540437/91‑1 (MQ=255) agTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGttttt > 1:3257551/1‑91 (MQ=255) aTTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTAttt > 2:2583925/1‑91 (MQ=255) aCTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGt > 1:710292/1‑91 (MQ=255) cTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGtt < 1:2039354/91‑1 (MQ=255) tttCATTAGACTGATTTACTAATCAAAAAACTTCTATCATGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCa < 1:897932/91‑1 (MQ=255) tttCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCa < 1:2498024/91‑1 (MQ=255) cATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCatat > 2:1369560/1‑91 (MQ=255) cATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCatat > 1:3283363/1‑91 (MQ=255) aTTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTCTGATAGAAGTTTTTATTTTTGTTCATAtt > 1:3168623/1‑91 (MQ=255) aGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAt < 2:3381300/91‑1 (MQ=255) gACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAtt > 1:963867/1‑91 (MQ=255) gACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAAtt > 1:344097/1‑91 (MQ=255) cTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTa < 1:3452258/91‑1 (MQ=255) gATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATc > 2:98065/1‑91 (MQ=255) tttACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTa > 2:3738468/1‑91 (MQ=255) tACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAg > 2:1970183/1‑91 (MQ=255) tACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAg < 1:1456759/91‑1 (MQ=255) tACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAg < 1:2360461/91‑1 (MQ=255) aCTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTTTTCTTATTAATTTATCTAAgc > 2:826496/1‑91 (MQ=255) aCTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgc < 1:2615876/91‑1 (MQ=255) cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTTTTCTTTTTAATTTATCTAAgcg > 2:413517/1‑91 (MQ=255) cTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAgcg > 1:3847526/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCt > 2:2712626/1‑91 (MQ=255) aaTCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCt > 2:3492356/1‑91 (MQ=255) aTCAAAGAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTa < 2:666163/91‑1 (MQ=255) cAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACg > 2:1028911/1‑91 (MQ=255) cAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACg < 1:1457859/91‑1 (MQ=255) cAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACg > 2:285110/1‑91 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGa < 1:183995/91‑1 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGa < 2:3839404/91‑1 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGa > 2:2518908/1‑91 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGa < 1:2589106/91‑1 (MQ=255) aaaaaaCTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGa > 1:2879661/1‑91 (MQ=255) | CAATAAGAAACTCGTTCCAAATTTGAATCCTATAATGAATTCGTCTCATGAAGAAGTTATTTACTTTTCATTAGACTGATTTACTAATCAAAAAACTTCTATCACGAACGCTTCAATTTCCTGTATGCGTGTGATAGAAGTTTTTATTTTTGTTCATATTAATTTATCTAAGCGCTACGA > USA300TCH1516_ALE/2681320‑2681499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |