| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 2740966 = | 122 (0.600) | 33 (0.200) | 16/132 | NT | 23.6% | intergenic (+8/+73) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase |
| ? | USA300TCH1516_ALE | 2741016 = | 113 (0.670) | intergenic (+58/+23) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase | |||||
Only 100 of 298 total aligned reads displayed.
ATTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAG > USA300TCH1516_ALE/2740875‑2741055 | aTTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAG‑AAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAA < 1:161961‑M1/91‑1 (MQ=255) agatgcactgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaata < 2:1033716‑M1/1‑1 (MQ=255) gatgcactgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaataa < 2:1744237‑M1/2‑1 (MQ=255) gtgcactgactgctttggaagcaggtaacgtagatcaatatgacatatctggacaaagttggtaatagcgattatcttaatataaaataaa > 2:852752‑M1/89‑91 (MQ=255) atgcactgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaataaa > 1:1722779‑M1/89‑91 (MQ=255) tgcactgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaataaaa > 2:3775677‑M1/88‑91 (MQ=255) gcactgactgctttggaagcaggggactgagatcaatatgacatagctggacagggggggtaatagcgattatcttaatataaaataaaaa > 2:2162197‑M1/87‑91 (MQ=255) ggTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA < 1:3574506‑M1/91‑1 (MQ=255) ggTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA > 1:137701‑M1/1‑91 (MQ=255) ggTATCATCCTATATGTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA < 2:3877711‑M1/91‑1 (MQ=255) cactgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaataaaaaa > 1:869557‑M1/86‑91 (MQ=255) ctgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtcatagcgattatcttaatataaaatAAAAAA‑‑Tc < 1:3374400‑M1/8‑1 (MQ=255) tgactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCa > 1:1537054‑M1/83‑91 (MQ=255) atcatcCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCA < 2:1310558‑M1/91‑1 (MQ=255) atcatcCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAAAAAAAAAAA‑‑TCA < 2:3126934‑M1/91‑1 (MQ=255) tcatcCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCAT > 2:700351‑M1/1‑91 (MQ=255) tcatcCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCAT > 1:2530898‑M1/1‑91 (MQ=255) gactgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCAt < 1:3910010‑M1/10‑1 (MQ=255) ctgctttggaagcaggtaacttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCAttt > 2:278418‑M1/80‑91 (MQ=255) atcCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTT > 1:2806850‑M1/1‑91 (MQ=255) accTATATTGAAGTTATGGACTTAGACATTCTAAGAAAAATGACATAGATGAATAACACAAAAAAAAAAAAAAAAAAAAAAAAA‑‑TCATTTc < 2:2657069/90‑1 (MQ=255) gctttggaagcaggtaacttagatcaatatgacatatctggccaaggttggtaatagcgaatatcttcatataaaatAATAAA‑‑TCATTTcc < 2:3019612‑M1/14‑1 (MQ=255) tataTTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCa > 2:3083089/1‑91 (MQ=255) atatTTAAGTTATGGACTTATACATTCTAAGAAAAATGACATAGATGAATACCACCCACCAAAATAAAAAAAAAAAAAAA‑‑TCATTTCCCAt < 2:1494930/91‑1 (MQ=255) tttAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatct < 1:3089017‑M1/91‑7 (MQ=255) tAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGAt > 2:2823344/1‑91 (MQ=255) aGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTa > 1:3621519/1‑91 (MQ=255) aTGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACAt < 1:789096/91‑1 (MQ=255) aTGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACAt < 1:2379370/91‑1 (MQ=255) tGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATc < 1:557720/91‑1 (MQ=255) ttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAg > 2:2007922‑M1/60‑91 (MQ=255) aCTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatca < 2:354955‑M1/91‑19 (MQ=255) aCTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAg < 1:3658362/91‑1 (MQ=255) aCTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAg < 1:802102/91‑1 (MQ=255) aCTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAg < 1:3221841/91‑1 (MQ=255) ttAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAt > 1:1937525/1‑91 (MQ=255) tAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtg > 2:3165787/1‑91 (MQ=255) tAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtg < 1:649560/91‑1 (MQ=255) aGACATTCGAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtgt < 2:1443538/91‑1 (MQ=255) gACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTg > 1:3460915‑M2/1‑90 (MQ=255) caatatgacagatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAGAtgt > 2:1112238‑M1/54‑91 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatggg < 1:151069‑M1/91‑25 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatggg < 1:1205482‑M1/91‑25 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTgg < 2:1900845‑M2/91‑3 (MQ=255) caatCTAAGAAAAAGGACGTAGCAGAAGAACGTCTAGCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGa < 2:48950/88‑1 (MQ=255) cATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTgga > 1:658479‑M2/1‑88 (MQ=255) aatatgacatatctggacaaagttggtaatagcgagaatcttaagataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATC‑AGATGTGGaa > 2:2618547‑M1/53‑91 (MQ=255) aatatgacatatatggaaaaagttggtaatagcgattattttaaaaaaaaaaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGa > 2:353064‑M1/53‑91 (MQ=255) aatTATAAGAAAAATGAAGTAGCTGAATAACACCAAAAAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTgga > 2:666516‑M2/2‑88 (MQ=255) atatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGaa > 1:224752‑M1/52‑91 (MQ=255) aTTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaa < 2:209512‑M2/91‑5 (MQ=255) ttCTAAGAAAAATGAAGTAGCTGAATAACACCAATCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaa < 2:2356255‑M1/91‑28 (MQ=255) tatgtcatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGaaa > 1:3298872‑M1/51‑91 (MQ=255) cTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatg < 2:2118500‑M2/91‑8 (MQ=255) gacatatctggacaaggttggtaatagcgattatcttaatataagatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGa > 1:3134721‑M1/48‑91 (MQ=255) aaGAGAAAGGGCGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgat > 2:1660314‑M2/1‑82 (MQ=255) aggaaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGAtt < 2:682708/88‑1 (MQ=255) aaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttt < 2:502884‑M2/91‑14 (MQ=255) aaaaTGACGTAGCTGAATACAACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttt < 2:538132‑M2/91‑14 (MQ=255) aaaTGACGTAGCTGTATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGTTTAACATCCAGATCAggaattgatttttt < 2:2895925‑M2/91‑15 (MQ=255) aTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑‑AAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttat < 1:526400‑M1/91‑41 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatt > 2:682124/1‑91 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAANAAAANATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatgatttttttta < 1:1107425‑M1/91‑40 (MQ=255) ggacaaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTtttta > 2:3827208‑M1/39‑91 (MQ=255) gACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCtcatctggatgttaatcagatgggaaatgattttttttat < 2:152385‑M1/91‑41 (MQ=255) gACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTCGAAATGATTttttattt > 1:3391089/1‑91 (MQ=255) aCGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt > 1:1593891/1‑91 (MQ=255) aCGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt < 2:1852637/91‑1 (MQ=255) caaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttattt > 2:1426847‑M1/36‑91 (MQ=255) gTAGCTGAATATCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTtttattttat > 2:3312196/1‑91 (MQ=255) gTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTtttattttat > 1:2352605/1‑91 (MQ=255) aaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt > 1:1099391‑M1/35‑91 (MQ=255) tAGCTGAATACCACCCACCAAAATATAAAAT‑‑AAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttatttttta < 1:1023136‑M1/91‑47 (MQ=255) gCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATAtt > 2:432085/1‑91 (MQ=255) gCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATAtt > 1:2438420/1‑91 (MQ=255) cTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTa < 1:2969869/91‑1 (MQ=255) tGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTaa < 2:3946528/91‑1 (MQ=255) tGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTaa < 2:1813640/91‑1 (MQ=255) ggAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTTCCATCTGATTAACAGCCAGATGTGGAAATGATTTTTTATTTTATATTaa < 2:3480446/90‑1 (MQ=255) accaccCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATaa < 1:2482412/91‑1 (MQ=255) cgacccacaAAAATAAAAAATAAGAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGTAATGATTTTTTATTTTATATTAAGATAAt < 2:3604763/89‑1 (MQ=255) cccaccAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGc < 2:2553254/91‑1 (MQ=255) cccaccAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGACGGGGAAATGATATTTTATTTTATATAAAGATAATCGc > 2:2768280/1‑91 (MQ=255) ccaccaAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCt < 1:3767297/91‑1 (MQ=255) accaAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAt < 2:1973930/91‑1 (MQ=255) ccaAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAtt < 1:2078228/91‑1 (MQ=255) ccaAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTAtt > 1:1142422/1‑91 (MQ=255) aaaaataaaaaataaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTa < 2:944210/90‑1 (MQ=255) aaaataaaaaataaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAc < 2:268815/91‑1 (MQ=255) aaaataaaaaataaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAc < 1:102353/91‑1 (MQ=255) tcataaaaaataaaaaAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAcc < 2:3963177/89‑1 (MQ=255) aaataaaaaataaaAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAcc > 2:2301563/1‑91 (MQ=255) aataaaaaatcaaaAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTACTACCa > 2:3207442/1‑91 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttattttttattttggtgggtggtattcagctacg < 1:444198‑M2/91‑48 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt > 1:2067349/1‑91 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCACCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt > 2:1267209/1‑91 (MQ=255) aaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTg < 1:2701768/91‑1 (MQ=255) ataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttattttttattttggtgggtggtattcagctacgtcat < 1:525922‑M2/91‑52 (MQ=255) taaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTcc < 2:247888/91‑1 (MQ=255) aaaaaaaa‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCa > 1:2203561/1‑91 (MQ=255) | ATTGTTGGTATCATCCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAG > USA300TCH1516_ALE/2740875‑2741055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |