| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 2740979 | 120 (0.590) | 30 (0.180) | 15/132 | NT | 22.1% | intergenic (+21/+60) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase |
| ? | USA300TCH1516_ALE | = 2741001 | 113 (0.670) | intergenic (+43/+38) | yhdG_2/USA300HOU_RS14115 | putative amino acid permease YhdG/Isoleucine 2‑epimerase | |||||
Only 100 of 298 total aligned reads displayed.
CCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGA > USA300TCH1516_ALE/2740889‑2741069 | gctttggaagcaggtaacttagatcaatatgacatatctggccaaggttggtaatagcgaatatcttcatataaaatAATAAA‑‑TCATTTcc < 2:3019612‑M1/14‑1 (MQ=255)ccTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCC < 1:132002‑M1/91‑1 (MQ=255) tataTTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAAT‑AAAAATCAAAAAAA‑‑TCATTTCCCAt < 2:2343257/91‑1 (MQ=255) atatTTAAGTTATGGACTTATACATTCTAAGAAAAATGACATAGATGAATACCACCCACCAAAATAAAAAAAAAAAAAAA‑‑TCATTTCCCAt < 2:1494930/91‑1 (MQ=255) atatTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCAt > 1:3664281/1‑91 (MQ=255) atatTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACAAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCAt < 2:313901/91‑1 (MQ=255) tAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGAt < 2:465256/91‑1 (MQ=255) aaGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAAAAAAAAAAAAAAAAAA‑‑TCATTTCCCATCTGAtt < 2:3317613/91‑1 (MQ=255) aGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTa > 2:493663/1‑91 (MQ=255) tGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATc < 1:557720/91‑1 (MQ=255) cttagatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCa > 1:2697078‑M1/61‑91 (MQ=255) aCTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatca < 2:354955‑M1/91‑19 (MQ=255) aCTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAg < 1:802102/91‑1 (MQ=255) ttAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAt > 1:1856339/1‑91 (MQ=255) agatcaatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAg > 1:3631022‑M1/58‑91 (MQ=255) tAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtg < 1:649560/91‑1 (MQ=255) atcaatatgacataacaggaaaaggttagtaatagcgattatcttaaaaaaaaaaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtgt > 2:2640253‑M1/56‑91 (MQ=255) aGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatg < 2:2113926‑M1/91‑23 (MQ=255) aGACATTCTAAAAAAAATGACGTAGCTGAATACCACCCACAAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatg < 2:201001‑M1/91‑23 (MQ=255) aGACATTCGAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtgt < 2:1443538/91‑1 (MQ=255) tcagtatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGCtgtg > 1:3119429‑M1/55‑91 (MQ=255) gACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTg > 2:1669694‑M2/1‑90 (MQ=255) acaatatgacatatctggacaaggttggtaatagcgattatcataataaagaagAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGAtgtg > 2:3251165‑M1/55‑91 (MQ=255) caatatgacagatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAGAtgt > 2:1112238‑M1/54‑91 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatggg < 1:151069‑M1/91‑25 (MQ=255) aCATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatggg < 1:1205482‑M1/91‑25 (MQ=255) aatatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGa > 2:2381868‑M1/53‑91 (MQ=255) aatatgacatatctggacaaggttggtaataactattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATC‑AGATGTGGaa > 2:2617919‑M1/53‑91 (MQ=255) aatatgacatatatggaaaaagttggtaatagcgattattttaaaaaaaaaaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGa > 2:353064‑M1/53‑91 (MQ=255) aatTATAAGAAAAATGAAGTAGCTGAATAACACCAAAAAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTgga > 2:666516‑M2/2‑88 (MQ=255) atatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGaa > 1:224752‑M1/52‑91 (MQ=255) atatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGaa > 2:303363‑M1/52‑91 (MQ=255) atatgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGaa > 1:1678161‑M1/52‑91 (MQ=255) ttCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaa < 1:1179018‑M1/91‑28 (MQ=255) ttCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaa > 1:211488‑M2/1‑86 (MQ=255) tatgtcatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGaaa > 1:3298872‑M1/51‑91 (MQ=255) gataaGAAAAATGACGGGGCGAAATATCACCAACAAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaat < 2:3484146‑M1/89‑29 (MQ=255) atgacatatctggacaaggttggtaatagcgattatcttaatataaaatAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAAt > 1:978374‑M1/50‑91 (MQ=255) cTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatg < 2:2118500‑M2/91‑8 (MQ=255) cTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatg < 1:2964270‑M2/91‑8 (MQ=255) tAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatga < 1:1107348‑M1/91‑31 (MQ=255) aggaaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGAtt < 2:682708/88‑1 (MQ=255) aaaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgatttt > 1:2473051‑M2/1‑79 (MQ=255) aaaaTGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttt > 2:3169233‑M2/1‑78 (MQ=255) aTGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttat > 1:2328360/1‑91 (MQ=255) aTGACGTAGCTGAATACCACCCACCAAAATAAAAAAT‑‑AAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttat < 1:525922‑M1/91‑41 (MQ=255) tGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatt > 2:682124/1‑91 (MQ=255) ggacaaggttggtaatagcgattatcttaatataaaatAAAAAAAATCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTtttta > 2:3827208‑M1/39‑91 (MQ=255) gACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCtcatctggatgttaatcagatgggaaatgattttttttat < 2:152385‑M1/91‑41 (MQ=255) gACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTCGAAATGATTttttattt > 1:3391089/1‑91 (MQ=255) aCGTAGCTGAATACCACCCACCAAAATAAAAAATAAATAAAA‑‑TCATCTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt > 1:3150560/1‑91 (MQ=255) aCGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt > 1:1593891/1‑91 (MQ=255) aCGTAGCTGAATACCAAACAAAAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttt < 2:1852486/91‑1 (MQ=255) cGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTttttatttta < 2:988890/91‑1 (MQ=255) cGTAGCTGAATACCACCCACCAAAATAAAAAAT‑‑AAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttt < 1:444198‑M1/91‑45 (MQ=255) tAGCTGAATACCACCCACCAAAATATAAAAT‑‑AAAAAA‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttatttttta < 1:1023136‑M1/91‑47 (MQ=255) gCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATAtt > 1:2438420/1‑91 (MQ=255) cTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTa > 2:1295543/1‑91 (MQ=255) cTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTa < 2:3101323/91‑1 (MQ=255) tGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTaa < 2:1813640/91‑1 (MQ=255) cccaccAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGc < 2:2553254/91‑1 (MQ=255) caAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTa < 1:2041650/91‑1 (MQ=255) caAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTa < 1:3013328/91‑1 (MQ=255) aaaataaaaaataaAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAc < 1:102353/91‑1 (MQ=255) tcataaaaaataaaaaAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAcc < 2:3963177/89‑1 (MQ=255) aaataaaaaataaaAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTAcc > 2:2301563/1‑91 (MQ=255) aataaaaaataaaaAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCa < 2:361854/91‑1 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt > 1:2067562/1‑91 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt > 2:695642/1‑91 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt < 2:2704872/91‑1 (MQ=255) aaaaataaaaaaAA‑‑TCATTTCCCACCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCt > 2:1267209/1‑91 (MQ=255) aaaataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTCTTTATTTTATATTAAGATAATCCCTATTACCAACCtt > 1:2372727/1‑91 (MQ=255) aaaataaaaaaAA‑‑TCATTTCCCATCTGAGTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCtt < 2:284794/91‑1 (MQ=255) ataaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttattttttattttggtgggtggtattcagctacgtcat < 1:525966‑M2/91‑52 (MQ=255) taaaaaaAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttttatnttttnttttggtgggtggtattcagctacgtca < 1:1107425‑M2/91‑53 (MQ=255) aaaaaaaa‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCa > 1:2203561/1‑91 (MQ=255) aaaaaaa‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAg > 2:3941754/1‑91 (MQ=255) aaaaa‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggttgtattcagctacgtcatttt < 2:538132‑M1/91‑79 (MQ=255) aaaaa‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttt < 2:1999840‑M1/91‑79 (MQ=255) AAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGat > 2:2470525‑M1/1‑91 (MQ=255) AAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGatat > 2:741436‑M1/1‑91 (MQ=255) aa‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttct < 2:3947141‑M1/91‑82 (MQ=255) a‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttctt < 1:351215‑M1/91‑83 (MQ=255) a‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttctt > 1:377537‑M1/1‑9 (MQ=255) a‑‑TCATTTCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgccctttctctt > 2:1660314‑M1/1‑9 (MQ=255) A‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGt < 1:33477‑M1/91‑1 (MQ=255) tCATTTCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttctta < 1:1521230‑M2/91‑62 (MQ=255) TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTc > 1:2597183‑M1/1‑91 (MQ=255) tttCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaa < 2:1967051‑M2/91‑65 (MQ=255) tttCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaa < 1:3575217‑M2/91‑65 (MQ=255) TTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTACGATCCTCGCTACTACCCACCTTGTCCCGCTATGTcatt < 2:597473‑M1/91‑2 (MQ=255) ttCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaat < 2:906938‑M1/91‑88 (MQ=255) ttCCCATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaat < 1:2772743‑M2/91‑66 (MQ=255) tCCacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaatg > 1:658479‑M1/1‑3 (MQ=255) TCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTACGATAATCGCTATTCCCAACCTTGTCCAGATATGTCATAtt < 2:3593780‑M1/91‑1 (MQ=255) TCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATAtt < 2:2796452‑M1/91‑1 (MQ=255) TCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATAtt > 1:527216‑M1/1‑91 (MQ=255) cccATCTGATTAACATCCAGATGTggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaatgt < 1:753055‑M2/91‑68 (MQ=255) ccacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaatgt < 2:1900845‑M1/91‑90 (MQ=255) cacatctggatgttaatcagatgggaaatgattttttttattttttattttggtgggtggtattcagctacgtcatttttcttagaatgtc > 1:3460915‑M1/1‑1 (MQ=255) | CCTATATTTAAGTTATGGACTTAGACATTCTAAGAAAAATGACGTAGCTGAATACCACCCACCAAAATAAAAAATAAAAAAAA‑‑TCATTTCCCATCTGATTAACATCCAGATGTGGAAATGATTTTTTATTTTATATTAAGATAATCGCTATTACCAACCTTGTCCAGATATGTCATATTGA > USA300TCH1516_ALE/2740889‑2741069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |