| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | = 37045 | 144 (0.710) | 20 (0.120) | 9/128 | NT | 13.9% | intergenic (+69/‑768) | USA300HOU_RS14915/ugpQ_1 | hypothetical protein/Glycerophosphodiester phosphodiesterase, cytoplasmic |
| ? | USA300TCH1516_ALE | = 37067 | 133 (0.820) | intergenic (+91/‑746) | USA300HOU_RS14915/ugpQ_1 | hypothetical protein/Glycerophosphodiester phosphodiesterase, cytoplasmic | |||||
Only 100 of 355 total aligned reads displayed.
AACATATAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGC > USA300TCH1516_ALE/36955‑37135 | atagtatgtgcgagagactaatggctcgagccatacccctaggcaagcatgcacgtacaaaatcgtaagataaaaAAATAAGCATATCACt > 2:3494102‑M1/76‑91 (MQ=255)aaCATATAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACT > 1:2544497‑M1/1‑91 (MQ=255) aCATATAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTa > 2:2561302/1‑91 (MQ=255) cATATAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTaa < 2:1426799/91‑1 (MQ=255) atatAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTaaa < 1:404092/91‑1 (MQ=255) atatAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTaaa < 1:1987082/91‑1 (MQ=255) tataAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAAc > 2:1515013/1‑91 (MQ=255) aaGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGGCATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGa < 2:3056813/91‑1 (MQ=255) aaGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGa < 1:1709372/91‑1 (MQ=255) aaGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGa < 1:2465971/91‑1 (MQ=255) aGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGAt > 1:3521228/1‑91 (MQ=255) gATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGAtt > 1:3022726/1‑91 (MQ=255) aTAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGAttt < 1:2169794/91‑1 (MQ=255) aaaTAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTaaa > 1:3714803/1‑91 (MQ=255) aaTAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAg < 1:3850126/91‑1 (MQ=255) aaTAAACTAGTGACCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAg < 2:3282162/91‑1 (MQ=255) aTAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGt > 2:2063209/1‑91 (MQ=255) tAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGtt < 1:2273032/91‑1 (MQ=255) tAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGtt < 1:2383039/91‑1 (MQ=255) aaCTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTa > 2:906679/1‑91 (MQ=255) aaCTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTa > 2:1355344/1‑91 (MQ=255) aCTAGTGGCCGATTGGGCTGGATGAGCTTGTGGCATAAATCCTAACTCGAAATAAATAAGCACATCACTAAACTGATTTTTTAAAGTTTAc < 2:3636814/91‑1 (MQ=255) gctcgagccatacccctaggcaagcatgcacgtacaaaatcgtaagataaaaAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACa > 1:1441728‑M1/53‑91 (MQ=255) aGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagt < 1:769126‑M2/91‑4 (MQ=255) gTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtg > 1:1692031‑M2/1‑87 (MQ=255) tGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTgtaaactttaaaaaatcagtttagtga < 2:1528372‑M1/91‑28 (MQ=255) gCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgata < 1:62412‑M2/91‑8 (MQ=255) gCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgata < 1:62045‑M2/91‑8 (MQ=255) ccGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTgtaaactttaaaaaatcagtttagtgatat < 1:1058157‑M1/91‑31 (MQ=255) ccGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatat < 2:3775685‑M2/91‑9 (MQ=255) ccGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatat > 2:1630814‑M2/1‑83 (MQ=255) ccGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatat < 1:1892712‑M2/91‑9 (MQ=255) gATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTgtaaactttaaaaaatcagtttagtgatatgc < 1:3601897‑M1/91‑33 (MQ=255) gATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgc > 2:2438377‑M2/1‑81 (MQ=255) atacccctaggcaagcatgcacgtacaaaatcgtaagataaaaAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGc > 1:126356‑M1/44‑91 (MQ=255) aTTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgct > 1:819400‑M2/1‑80 (MQ=255) gtgCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTgtaaactttaaaaaatcagtttagtgatatgcttat < 1:1380100‑M1/91‑37 (MQ=255) gtgCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttat > 2:710703‑M2/1‑77 (MQ=255) tgCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttatt > 1:2971803‑M2/1‑76 (MQ=255) ggcTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTgtaatcgttaaaaaatcagtttagtgatatgcttatt < 2:1721261‑M1/90‑38 (MQ=255) gCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttattt < 1:3343591‑M2/91‑17 (MQ=255) cTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTAtttt > 1:2811432/1‑91 (MQ=255) cTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTAtttt < 1:856850/91‑1 (MQ=255) ttGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTAttttt > 1:1094947/1‑91 (MQ=255) ttGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCAGATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTAttttt < 1:3134774/91‑1 (MQ=255) gatgaGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTAttttttt > 2:1027106/1‑91 (MQ=255) atgaGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATAACACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTa > 2:3055071/1‑91 (MQ=255) tgaGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTAt < 1:2866271/91‑1 (MQ=255) tgaGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTAt < 1:3373148/91‑1 (MQ=255) aGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAGAGTTTACAGTGATATGCTTATTTTTTTATCt < 2:1285635/91‑1 (MQ=255) aGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCt < 2:1942363/91‑1 (MQ=255) aGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCt > 1:2975758/1‑91 (MQ=255) gCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCtt < 2:2458233/91‑1 (MQ=255) gCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCtt < 2:2767398/91‑1 (MQ=255) cTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTa > 1:2749539/1‑91 (MQ=255) ggACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGAt > 1:3093334/1‑91 (MQ=255) aTAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTg > 2:3859421/1‑91 (MQ=255) aTAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGCGATATGCTTATTTTTTTCTCTTTCTTTTTTg > 2:356822/1‑91 (MQ=255) tAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGt > 1:3352897/1‑91 (MQ=255) aaaTCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAATGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTa > 2:2872460/1‑91 (MQ=255) aTCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACg < 1:881698/91‑1 (MQ=255) aTCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACg > 2:3213199/1‑91 (MQ=255) aTCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACg > 2:2313510/1‑91 (MQ=255) tCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGt < 2:1779017/91‑1 (MQ=255) ccTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTg > 1:289392/1‑91 (MQ=255) ccTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTg < 2:1543879/91‑1 (MQ=255) cTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGc > 2:608105/1‑91 (MQ=255) tCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCt < 1:2072475/91‑1 (MQ=255) tCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCt < 1:1583520/91‑1 (MQ=255) tCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCt < 1:1404505/91‑1 (MQ=255) tCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCt < 2:2191618/91‑1 (MQ=255) ataaataaGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCt < 2:3954845/91‑1 (MQ=255) ataaataaGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCt > 2:466723/1‑91 (MQ=255) aaataaGCATATCACTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagc < 1:725793‑M1/91‑76 (MQ=255) aataaGCATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagca < 2:662043‑M2/91‑55 (MQ=255) AATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAgg < 1:1551669‑M1/91‑1 (MQ=255) ataaGCATATCACTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcac > 2:2423553‑M1/1‑14 (MQ=255) ATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAggg > 1:3629115‑M1/1‑91 (MQ=255) AAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGt > 2:3153457‑M1/1‑91 (MQ=255) aGCATATCACTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaat > 1:2684386‑M1/1‑11 (MQ=255) AGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTa < 2:2993954‑M1/91‑1 (MQ=255) AGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTa < 1:928578‑M1/91‑1 (MQ=255) AGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTAGCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTa < 2:3116470‑M1/91‑1 (MQ=255) GCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTAt < 2:2586143‑M1/91‑1 (MQ=255) cATATCACTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcg > 1:1867956‑M1/1‑9 (MQ=255) cATATCACTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcg > 1:382940‑M1/1‑9 (MQ=255) cATATCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacactcg < 2:1144576‑M2/91‑61 (MQ=255) atatCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcgg < 1:178652‑M2/91‑62 (MQ=255) tatCACTAAACTGATTTTTTAAAGTTTACagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcggc < 1:1748877‑M2/91‑63 (MQ=255) atCACTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcggcc > 1:75256‑M1/1‑6 (MQ=255) TCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATggccc < 2:1861230‑M1/91‑3 (MQ=255) TCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTc < 1:3794519‑M1/91‑1 (MQ=255) TCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTc > 1:1929631‑M1/1‑91 (MQ=255) TCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTc < 1:2227439‑M1/91‑1 (MQ=255) aCTgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcggccact < 1:3931436‑M1/91‑89 (MQ=255) ACTAAACTGATTTTGTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGa > 2:2618462‑M1/1‑91 (MQ=255) CTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGTGTATGGCTCGAg < 2:557650‑M1/91‑1 (MQ=255) tgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcggccactag > 1:549343‑M1/1‑1 (MQ=255) tgtaaactttaaaaaatcagtttagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcggccactag > 1:3901771‑M1/1‑1 (MQ=255) tAAACTGATTTTTTAAAGTTTACagtgatatgcttatttatttcgagttaggatttatgtcccaagctcatcaagcacaatcggccactag < 1:3863359‑M2/91‑69 (MQ=255) | AACATATAAGATAGAGAAATAAACTAGTGGCCGATTGTGCTTGATGAGCTTGGGACATAAATCCTAACTCGAAATAAATAAGCATATCACTAAACTGATTTTTTAAAGTTTACAGTGATATGCTTATTTTTTTATCTTACGATTTTGTACGTGCATGCTTGCCTAGGGGTATGGCTCGAGC > USA300TCH1516_ALE/36955‑37135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |